Oncorhynchus tshawytscha (Chinook salmon): 112264994
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Entry
112264994 CDS
T05605
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112264994 (rnf169)
03400 DNA repair and recombination proteins [BR:
otw03400
]
112264994 (rnf169)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112264994 (rnf169)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112264994 (rnf169)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
112264994 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-RING_2
zf-RING_UBOX
zf-RING_4
zf-RING_5
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
112264994
NCBI-ProteinID:
XP_024297719
LinkDB
All DBs
Position
LG13:complement(44890991..44904965)
Genome browser
AA seq
658 aa
AA seq
DB search
MKMAATGSVRSTSGLGHKCKARPADMLKTRTHSQLLTLEEARCPVCSEILLEPVTMPCSH
SVCLHCFKRTVEFTSLCCPLCRLRVSSWARKQSREKSLVNVELWEMVRQSYPQRCKMRME
QRDCETGGEDIFRSPAQVSKSGEIRLEYGKQKVPINEEKEEGRRKVHHREGCGTLKHFQD
PFYGLLSDSENEEPIGKRTRNVSAFVRRTKISAGLHTNVVQRSQSCTDPEEGRRKMRVST
HLPGLDKASIAHSYNAGILLSSENSRSLSAPIIVQDKRHSWRGVIMASSTPFMVPQSKQE
RSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVMEPTIVKSTPRNLFRSLERPTSY
EASPTILQKWKQIEVDRQSVKVTSKGTLTNPMNEDLVFKPSPIEEKDGKPCSCAPAANKG
KEHLVMCAKTDSSGQENERTCIHNKRRLIFDQAIGETAFHQKQFTKFQTPFVALTSEETV
KECGVSFESVVVPELHCGPTSIHQNPTVVPHDINASVRSCKLKSKDSQDQRKEFDNRNCA
QNQPTSRRGKKRSQKTKHLEETESGLKRPRSQSQDGCNIECAQAELYIQQVQQEREDREL
ALNLQRQFDREQQQEDKQKTSPDKYFLRSCMSSENRIKCNPRRSGRISKKKEHFNCYY
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcggcgacagggtccgtcagatccaccagtggattggggcacaaatgcaaa
gccaggcccgccgatatgctgaaaactcggacacattcacagctgctaaccttggaggag
gcaaggtgtccggtttgttcggaaattttattagagcccgtaactatgccatgtagccac
tcggtgtgtctgcactgtttcaagcggacagttgaattcaccagtctgtgctgtcccctc
tgccgactgcgagtatccagctgggcccgtaaacagtcccgggagaaaagcctagttaac
gtcgaactctgggaaatggttcgacagagttacccacaacgatgcaagatgagaatggag
cagagagactgtgagactggtggggaagacattttccgctcgcctgctcaggtatccaaa
tctggagagatccgactggagtatggaaagcaaaaagtcccaatcaatgaagagaaagaa
gaggggaggaggaaagtccaccacagagagggatgtggaactctcaagcactttcaagat
cctttctatgggttgctgtcagactcggagaatgaagaacccattgggaagagaaccaga
aatgtgtctgcgtttgttagaagaacaaagatctcagctggtctacataccaatgtggtg
cagagaagccagagctgtactgatccagaagagggaaggcgaaaaatgagggtatctact
catcttcctggactggacaaggcaagtattgctcacagctacaatgcaggaatccttctg
tcctctgagaacagccgatctctttcggcacccatcattgtccaagacaagaggcatagc
tggcgaggcgtcatcatggcgtcatcaacaccttttatggtcccccagtcgaaacaggag
aggtccattagccctgagagcaatgacagtatttctgaggagctgaatcacttcaagcca
atagtgtgttcgccgtgcaccccaccaaagcgactacctgacgggcgagtgatggaaccc
acaattgtgaagtccaccccccggaacttattccgcagcctggaaaggcccaccagctat
gaagcgagccctactatcctccagaaatggaagcagatagaggtggaccgtcagtctgtc
aaagtgacctcgaagggtaccttgaccaaccccatgaacgaggaccttgtcttcaaacca
agccccatagaggagaaggacggcaagccctgtagctgcgctccagcagcaaataaggga
aaagaacacttggttatgtgtgccaagactgattcctctgggcaagagaatgaaagaact
tgtatacataataaacgaagactgatatttgatcaggccattggagagacagccttccat
caaaaacaattcacaaagtttcaaactccatttgtagccttaaccagtgaggagactgta
aaagaatgtggggtttcttttgagtctgtggtggtacctgaattacattgtggaccaact
tcaattcatcaaaatccaaccgtagtaccacatgatataaatgccagtgttaggagttgc
aaacttaaatcaaaagactcacaggatcagagaaaagagtttgacaatagaaactgtgcc
cagaaccaacctacctcaaggaggggcaagaagaggagccagaagaccaaacacctggaa
gagacagagtctggactcaagaggccaagatcccagagccaagatggttgcaatatagag
tgtgcgcaggctgaactgtacattcaacaggttcagcaagagagagaggacagagagtta
gcattgaatcttcaaagacagtttgacagagaacagcaacaagaagacaagcaaaagacc
agtcctgacaagtactttctccggtcctgcatgtccagtgaaaacagaatcaaatgcaat
ccacgcagatcaggaagaatttccaaaaagaaagagcactttaattgctattattaa
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