Oncorhynchus tshawytscha (Chinook salmon): 112265002
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Entry
112265002 CDS
T05605
Name
(RefSeq) presenilins-associated rhomboid-like protein, mitochondrial
KO
K09650
rhomboid-like protein [EC:
3.4.21.105
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112265002
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112265002
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
112265002
Peptidases and inhibitors [BR:
otw01002
]
Serine peptidases
Family S54: Rhomboid family
112265002
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
112265002
Mitophagy factors
Parkin-dependent mechanism factors
112265002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Caps_synth_CapC
Motif
Other DBs
NCBI-GeneID:
112265002
NCBI-ProteinID:
XP_024297741
LinkDB
All DBs
Position
LG13:45727046..45743747
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AA seq
373 aa
AA seq
DB search
MAWRGCVLRWARADINSTVTRGNRFTLNTQQRCSFRKAAKETKTKKGVIEETGPSHTEPS
EGLIHKRGASPPVHPSVAYTHPRSFGRLVKPLVFTIGFTACSFGTAAIWQYESLKSRVQS
YFDEVRADWLEKLRPQKQGDLRKWINQWWNGLSEGQRTVTGIIAANAVVFCCWRVPSLQR
SMIKYFTSNPASKTLCFPMLLSTFSHYSFFHMAANMYVLWSFSSSIVSMLGREQFMAVYV
SAGVISTMFSYVCKTASGRLGPSLGASGAIMTVLAAVCTKMPEAKLAIIFLPMYAFSAGN
ALKAIVAMDTAGLVLGWRYFDHAAHLGGALFGIWYIMYGHELIWKNREPLVKVWHDLRTK
GPGGGGNGGSGPL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggaggggttgcgttttaagatgggctagggctgacatcaatagtacagtaacc
agaggaaacagattcaccctcaacactcaacagagatgtagcttcaggaaagcagcgaag
gagacaaagaccaagaagggggtcatagaggagacggggccctcacacacagagcccagt
gaagggctcatccacaagaggggggcatctccccccgtgcatccctcagtggcatacaca
caccccaggagctttggcagactggtcaagcccctggtgttcacaatagggtttacagcc
tgttcatttggcacagcggccatctggcagtatgagtcactaaagtcccgggtccagagc
tactttgacgaggtccgtgccgactggctggagaaactacggccgcagaaacagggggat
cttcgcaaatggatcaaccagtggtggaacggcttgagtgagggacaacgtactgttaca
gggatcatagctgctaatgccgtggtgttttgctgttggagggtgccgtccctccagcgc
tctatgatcaaatacttcacatccaaccctgcctccaaaaccctgtgtttccccatgctc
ctgtccacgttcagccactactccttcttccacatggcggccaacatgtacgtcctctgg
agcttctcctccagcatcgtctccatgctaggcagggagcagttcatggctgtctacgtg
tctgcaggtgttatatctacgatgttcagctatgtgtgtaagacagccagcgggcgcttg
ggtccctctcttggagcgtcaggagccatcatgacagtcttggctgccgtctgtaccaaa
atgccagaggctaagctggcaatcatcttcctcccgatgtatgctttctctgcaggcaat
gcattgaaagccatagtagctatggacacagctggcctagttttaggatggcggtacttc
gaccacgcggcccatctcggcggagctctttttggcatctggtacatcatgtatggccac
gagctgatatggaagaatcgcgagcctctagtgaaggtgtggcacgaccttaggacgaag
ggtcctggtgggggaggaaacggtggcagcggccccctgtag
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