Oncorhynchus tshawytscha (Chinook salmon): 112265005
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Entry
112265005 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: protein IWS1 homolog
KO
K17498
transcription factor SPN1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112265005
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112265005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med26
Motif
Other DBs
NCBI-GeneID:
112265005
NCBI-ProteinID:
XP_024297750
LinkDB
All DBs
Position
LG13:complement(45986353..46018662)
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AA seq
816 aa
AA seq
DB search
MDGEEDEFFSGNHSDGGGTPVQDEHAPGSDGEEEMRNEPCHSEDENNDGEGAAQAMETNG
VASGSDNKCPERADRDSEGEAPGPADSDNKEQSPPKRGGSTSDIEESPPKRGGSTSDIEE
SPPKRGGSTSDIEESPPKREAAPPHRGVPAQTGRQHLRHRGVPAQTGGSTSDIEESPPKR
GGSTSDIEESPPKRGGSDSDIEESPPKRGGSTSDMEESPPIRGGSTSDMEESRPIRGGST
SDMEESRPIRGGSTSDMEESRPIRGGSTFDMEEKETKRDAAGSDSENENRPPARSRHSSA
RSDSEIETPKHKAQIESDGEEGGKNKGKWKAVMHSDSEDEVEAQPAKAAAGSDQEKESPA
KLVGEVSEDDDEMPMKRKKAILSDSEGEEEKADEPVVKKSRAVSDDDNSDSDAGSEAPDK
TMAKLRELGSESEDEDDGQKVEGGKKDEKTLFGSDSDSGDEEEKMIADIFGDSGDEEGEE
FTGFNQEDLEGDKSQSQASAKKAMADDSDSDEGVDRGGGQDTSFMSDFDVMLARKKAQSG
KRRRNRDGGTFISDADDVVSAMITKMTEAAEEDRTLNAQKKPALKKLTLLPTVVMHLKKQ
DLKETFIDSGVMSAIKEWIGPLPDKSLPALKIREDLLKILQELPSVSQETLKHSGIGRAV
MFLYKHPKESRPNKDLALKLINEWSRPIFGLTSNYKGMTREERQQRDLDQQMPQKRRLSS
GGQTPHRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNVESESRAAPVKK
GMSRVDKQLRRFADIKRMTKTGHAVKISVQGNRMPL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggatggcgaagaggacgaattcttctccgggaaccactctgatggtggtggcaccccg
gtacaggacgaacatgctcctggttcagatggggaagaggagatgaggaatgagccatgc
cactctgaggatgagaataatgatggtgagggagctgctcaggccatggagacaaacggc
gtggccagcgggtcagacaacaagtgccccgaacgggcggacagggactctgaaggggag
gcccctgggcctgcagacagcgataacaaggagcagtccccgcccaaacggggaggcagc
acctccgacatagaggagtccccgcccaaacggggaggcagcacctccgacatagaggag
tccccgcccaaacggggaggcagcacctccgacatagaggagtccccgcccaaacgggag
gcagcacctccgcatagaggagtccccgcccaaacggggaggcagcacctccgacataga
ggagtccccgcccaaacgggaggcagcacctccgacatagaggaatccccgcccaaacgg
ggaggcagcacctccgacatagaggagtccccgcccaaacgcggaggcagcgactccgac
atagaggagtccccgcccaaacgcggaggcagcacctccgacatggaggagtccccgccc
atacgcggaggcagcacctccgacatggaggagtcccggcccatacgcggaggcagcacc
tccgacatggaggagtcccggcccatacgcggaggcagcacctccgacatggaggagtcc
cggcccatacgcggaggcagcaccttcgacatggaggagaaagaaaccaaacgggatgca
gccgggagcgactctgagaacgagaatcggcccccagcccggagcagacactcgtctgca
cgcagtgactctgagattgagacgcccaaacacaaagcgcagatagagtctgatggagag
gaaggcggcaagaataaagggaagtggaaggctgtaatgcactccgacagtgaggatgag
gtggaggctcagccagcgaaagcagctgcaggcagtgaccaggagaaggagagtcccgca
aaactggtgggggaagttagtgaggatgacgacgagatgccaatgaagaggaagaaagcc
atcctgtcagacagtgaaggtgaggaggagaaggctgacgaaccagtggtgaagaagagc
cgcgccgtgtctgacgatgacaactccgacagtgacgcaggctcggaggcgccggacaaa
accatggccaaactgcgggaactgggatcagaaagcgaagacgaggatgatggacagaag
gtggaaggagggaagaaggacgagaaaacactgtttggtagcgacagtgattcaggcgac
gaggaagagaaaatgattgctgacatttttggtgactctggcgatgaagagggggaagag
tttacgggtttcaatcaggaggatctggagggggataagagccaatctcaggcctctgcg
aagaaagcaatggcagatgactctgactctgatgagggcgtggacaggggtggtggccaa
gacaccagtttcatgtcggacttcgacgtgatgctggctcgtaagaaggcccagagtggg
aagcggcgacggaaccgcgacgggggaacgttcatcagtgatgctgatgacgtggtcagc
gctatgatcaccaagatgacagaagctgcagaggaggacagaacactgaacgctcagaag
aagccagcgttaaaaaagctgaccctcctccccactgtagttatgcacctaaaaaagcaa
gaccttaaggagacgttcatcgacagcggggtgatgtcggctatcaaggagtggatcggc
ccgttgccagataagagtcttccggcactcaaaatcagagaggatctcctcaagatcctc
caggaactccccagtgtgagccaggagactctcaaacacagcgggataggtcgagccgtc
atgttcctatacaaacaccccaaggagtcgcgccccaacaaggacctcgctctcaaactc
atcaatgagtggtccaggcccatctttggcctgacgtctaactacaagggcatgacgcgc
gaggagagacaacagagagacctcgaccagcaaatgccgcaaaaaagacgcctcagctca
gggggacagactcctcatagagacctggagaaagtgctgacgggagaagagaaagctctg
cgcccaggcgaccctgggttctgtgcccgggccagggtgcccatgccatccaacaaggac
tacgttgtgcggcccaaatggaacgtggagagcgagtccagagcagccccggttaagaag
ggcatgtcacgggtggacaaacagttgcgtcgcttcgctgacataaagcgtatgacgaag
acgggccacgcggtgaagatcagcgtccagggcaaccggatgcccctctaa
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