Oncorhynchus tshawytscha (Chinook salmon): 112265007
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Entry
112265007 CDS
T05605
Symbol
zgc:162872
Name
(RefSeq) BAR_ACAPs and ArfGap_ACAP domain-containing protein isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112265007 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265007 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112265007 (zgc:162872)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112265007 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112265007 (zgc:162872)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112265007 (zgc:162872)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_4
Ank_5
PH_11
PH_8
IL3Ra_N
Motif
Other DBs
NCBI-GeneID:
112265007
NCBI-ProteinID:
XP_024297753
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All DBs
Position
LG13:complement(46021222..46033806)
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AA seq
719 aa
AA seq
DB search
MDSFLDYEECIQDSPAFRLTLDKCQTDVAELQSQVEKVMKLCGKMVESGQAYNTANQHFL
AGLAEFSTYHKRDSVIMNCMSQFIQGLQEMINFHTVLFDQTQRAINQQLSNLLTQFIPQL
GETRKEFVRIGEDLETAAVKNAQVYRHKVTDAERASHLLLATRKCHQHFALDYCLQLNNF
KAQQKLDILNSVFSYFHAQYTFFHQGFDLLRDLEPTMKSMAAQLAQLSTECTAKRKDLEN
THLLVQQRDASGEPILSSCPDGGETIQGYLFKRSRRKNKTWKRCWFSIKDNQLVYTKSHK
EEPVSLFDDLRLCAVKSLDSIDRRFSFELVSVKKCCALQADSEELKQAWISAVQGSIDMA
YRERVESQQPQPKESPLPLQSPSDPQPGQPPQRPAALVVALQSPGNHRCCDCSEEEPRWA
SVNLGITMCIECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCGLGNDVINGIYESRCAA
EGRVKPSAGSPRPEKETWIKEKYVEKRFVKDASSPETQIGRENAGRQLYQAAFQGDLVTM
ASALAQGAEVNWSHAEEEGRTALIGSTFGGSLSACEFLLQNGANVNYRDQRGQGALHTAA
TWGHTGQVCLLLKKGANQYAVDERGQDPLAIAIETAHADIVTLLRMARMNEEMRDSEGFF
GSMGDDETFQDIFRDFSDMASHDPERLTRRQFSRSGEAEGQDKRMVNDQHKAEKEEEDT
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggattcattcttggactatgaagaatgcatccaggactcacctgcatttaggcttacc
ctggataagtgtcaaactgatgttgcagagctgcagagtcaagtggaaaaggtgatgaag
ctctgtggcaagatggttgaatcagggcaagcatacaacacagcaaatcagcatttcctc
gccggactggccgagttctccacgtatcacaaacgtgacagcgtcatcatgaactgcatg
agtcagttcattcaaggactacaggagatgatcaactttcatactgtgctgtttgaccag
acgcaaagagctatcaatcagcagctgtcaaaccttctcacacagttcataccccagcta
ggagagactaggaaggagtttgtgcggattggggaggatctggagacggcggcggtgaaa
aatgcccaggtataccgccacaaagtcaccgatgcagagcgcgccagccatcttctgttg
gccacacgcaaatgtcaccagcactttgcccttgattactgcttgcagctgaataacttc
aaggcccagcagaagctggacatcctaaattctgtgttctcctacttccatgcccagtat
accttcttccaccaaggctttgacttgctgagagacttggagcccactatgaagtccatg
gccgcacagctcgcccagctctcgactgaatgtacagctaaaagaaaggacctggagaat
acccacctactggtccagcagagagatgcctcaggggagcccatactaagttcctgtcct
gatggtggggaaaccatacagggctacctcttcaaaagatctcggagaaagaacaagaca
tggaagagatgctggttttccattaaagacaaccaattggtatacacaaagtcccataag
gaggagcctgtgtcgctgtttgatgacctcaggctgtgtgcggtgaagtctctggacagc
attgaccgccgcttcagttttgagctggtttctgttaaaaaatgctgtgccctccaggct
gactcagaggagctgaagcaggcttggatcagtgccgttcaagggagcatagacatggcc
taccgcgagagagtggagtcccagcagcctcagcccaaagaaagccctctgcccctccag
agcccctcagacccccagccaggacagcctcctcaaaggcctgcagcgttggttgtggcc
ctccaaagtccggggaaccaccgctgctgcgactgcagtgaggaggagccacgctgggcc
agcgtcaacctgggtatcaccatgtgcatcgagtgctccggcatccacaggagcctcggg
gtccatctctccaaagtgcgatctctcaccctagactcctgggatcccgaacagctgaag
ctgctgtgtggtctgggtaatgatgtcatcaatgggatatatgagtccaggtgtgcagca
gagggcagagtaaagcctagtgctggcagccctcgcccagagaaagagacatggattaaa
gagaaatatgtggagaaaagatttgtgaaggatgccagctcgcctgaaacacagattggg
agggagaatgcagggcgccagttgtaccaggctgctttccaaggggacctggtcaccatg
gcatcagcgttggcgcagggtgcagaggtgaactggagccacgctgaggaggagggacgc
actgctctcattggctcaacttttgggggctccctatcggcctgtgagttcctactgcag
aatggagccaatgtaaactaccgtgaccagcgtggccaaggtgcccttcacactgcagcc
acctggggccacacagggcaagtgtgtctacttctaaaaaagggagccaatcagtatgca
gttgacgagagggggcaggacccactcgccattgccatagagacagcacatgccgatatt
gtaaccctactacgaatggctcgcatgaatgaagagatgagagactcagagggattcttt
ggatctatgggtgacgatgagacatttcaagacatcttccgtgacttcagtgatatggct
tctcacgatccagaaagactgacccgtcgacagttcagcagaagcggagaagcggaggga
caggacaagaggatggtgaatgaccagcacaaggcagagaaggaggaggaagacacatag
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