Oncorhynchus tshawytscha (Chinook salmon): 112265045
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Entry
112265045 CDS
T05605
Symbol
mmp28
Name
(RefSeq) matrix metalloproteinase-28
KO
K08006
matrix metalloproteinase-28 (epilysin) [EC:3.4.24.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112265045 (mmp28)
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M10
112265045 (mmp28)
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Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_4
DUF4953
Peptidase_M7
Peptidase_M57
Metallopep
Reprolysin_3
Motif
Other DBs
NCBI-GeneID:
112265045
NCBI-ProteinID:
XP_024297823
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Position
LG13:47538944..47569037
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AA seq
531 aa
AA seq
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MSLRDSPDQNKLWHIGPCIITALILIKSTVCTPVSTDWRVETPEAEGFLEKYGYLHQDNH
IHNAAEVKTAVREFQWLSHLPVTGQLDGATLKQMGTPRCGVKDEGSHQVWAQRVYAVFTG
KMASNGSQTRRKRYAQLGEKWYKRHLTYRIVNWPRHLAPGPVRLAVRAAFQLWSNVSGLA
FQEVPEGPSDIRLAFYEGEHNDGASNAFDGPGGALAHAFFPCRGEAHFDMAERWTLYGHK
GHNLFMVTAHEIGHTLGLEHSPVRHSLMSPYYRKLGRTLVLSWDDIAAVQQLYGKPLGGL
PMRLTGQAFSSALQEWELAEESEGHPEITQPLYCQGVFDAITMDQNHTVLVFRGSVYWMV
SAQGNVSAPLPLQQRWRHLPLAIEAAAFSPLDSKWYFFKGKRIWRYSGSALDPGFPKRSS
QAGLPCHPDCAFYYAPLGHMVLFKGPRYSVLNLHTLRSEPYYPRRLADWTGVPQGTNGAL
TRPDGRLYLFREQQYWRFDPVKVRMTREGQWAQDLDWIGCRNRTHQGNDIL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgcgagactctccggaccagaataaattgtggcatatcggtccatgtattata
actgcgctaatacttataaagtcaactgtttgcacaccggtgtcaacggactggcgggtc
gagacacctgaggctgagggcttcctggagaaatatggatacctgcaccaggacaatcac
atacacaatgctgcagaggtcaaaacagcagtccgggagtttcagtggctgtcccacctg
cccgtcacaggacagctggatggtgccaccctgaagcagatgggcacaccacggtgtggg
gtaaaggatgagggcagccatcaggtctgggcacagagagtctatgcagtcttcacaggc
aagatggcgtccaatgggtcacaaacccgcaggaaacgctatgctcaactaggtgagaaa
tggtacaagcgtcacctgacctacaggatagtgaactggcctcgtcaccttgcgccaggc
cccgtgaggcttgcagtgcgtgccgcctttcagctgtggagcaatgtgtcaggcctggcc
ttccaggaggtcccagagggcccctcggacatccgcctggcgttctatgagggcgagcac
aatgacggggccagcaacgcctttgatggcccagggggagctctagcacatgccttcttc
ccttgcaggggggaggcccacttcgacatggcagagagatggacgctgtacggacacaag
ggccacaacctgttcatggtgacagcccacgagataggccacacactggggctggaacac
tcaccggtgcgccactccctcatgtccccctactacaggaagctaggccgcaccctggtc
ctcagctgggatgacatcgctgcagtgcagcagctctatggaaagcctctggggggtctg
cctatgaggttaacaggccaggcattcagctcagccctgcaggagtgggagctggctgag
gagtccgagggacatcctgaaattacccagcccctctactgccagggagtctttgatgcc
atcactatggaccagaaccacacagtgctggtgttccggggcagtgtgtactggatggtg
tcggctcaggggaacgtgagcgcacctctccctctccagcagcgctggcgccacctccca
ctggccatcgaggccgcggccttctccccactggacagcaagtggtacttcttcaaaggt
aagcgtatatggcgttactcgggcagtgccctggaccctggcttccccaagaggagcagc
caggccggcctcccctgccacccagactgtgccttctactacgcccccctgggacacatg
gtcctctttaagggcccccgctactccgtgctcaacctgcacacactgaggtccgagccc
tactacccgcgccggctggccgactggaccggggtgccccagggaaccaacggtgcgctg
acccgtcccgacgggcgcctctatctctttagggagcagcagtactggaggtttgacccg
gtgaaggtgcgcatgaccagagaaggccagtgggctcaggacctggattggataggctgc
aggaacaggactcaccagggcaatgacatcctgtga
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