KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112265046
Entry
112265046         CDS       T05605                                 
Name
(RefSeq) cullin-3
  KO
K03869  cullin 3
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120  Ubiquitin mediated proteolysis
otw04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112265046
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    112265046
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112265046
   03400 DNA repair and recombination proteins [BR:otw03400]
    112265046
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     112265046
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112265046
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655
Other DBs
NCBI-GeneID: 112265046
NCBI-ProteinID: XP_042151737
LinkDB
Position
LG13:complement(47577863..47598307)
AA seq 767 aa
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVLHCLDKTTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQSTAVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLA
KHSGRQLTLQHHMGSADLNATFYGPIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTI
LMLFNNREKSMFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHMFTV
NDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNV
LVAEVTQQLRSRFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgtccaatctgagcaaaggcggcaccaaaaaggacaccaagatgagaatacgagccttt
cctatgacgatggacgaaaagtatgtcaacaacatctgggaccttctgaagaatgccatc
caggagatccagaggaagaacaacagcgggctgagctttgaggagctctacaggaatgcc
tacaccatggtgctgcacaaacacggcgagaagctctacacgggcctccgggaggtggtc
accgagcacctcatcaacaaagtacgggaagatgtcctcaactcactaaacaacaacttc
ctccaaacactgaaccaagcctggaacgaccaccagacggccatggttatgatcagagac
atcctcatgtacatggaccgggtgtacgtgcagcagaacaacgtggagaatgtctacaac
ctgggcctgatcatcttcagagaccaggtggtgcgctacggctgcatccgagaccacctc
cgacagaccctcctggacatgatcgcacgagagaggaagggcgaggtggtggacagggga
gcgatcagaaatgcatgccagatgttaatgatcttaggccttgaaggaaggtcggtttac
gaagaggactttgaggccccgtttttagaaatgtctgcagagttcttccagatggaaagt
caaaagtttttggcagagaacagcgcgagcgtgtacataaagaaagtggaggcacggata
aacgaggagatcgagcgcgtactgcactgcctggacaagacgacggaggagcccatcgtc
aaggtggtggagcgggagctcatctccaagcacatgaagaccatcgtggaaatggagaac
tcgggcctcgtccacatgctcaagaacggaaagacagaggacctggcgtgtatgtataag
ctctttagcagagtgccaaacggactgaagacgatgtgtgagtgcatgagctcctacctc
cgcgagcagggcaaggcgctggtgtcagaggagggcgagggcaaaaaccctgtagattac
atccagggtctgttggatctgaagtcacgtttcgatcgcttcctccaagagtcattcaac
aacgaccggctcttcaagcagaccatcgcaggggactttgaatacttcctcaacctcaac
tcgcgctctcccgagtacctctccttgttcatcgacgacaagctgaagaaaggcgtaaaa
ggattgacggagcaggaggtggagtcgatcctggacaaggccatggtgctcttcaggttc
atgcaggagaaggatgtgtttgagcggtactacaaacagcacctggccaggaggctgctc
accaataagagcgtctccgatgactcggagaagaacatgatctctaagctcaagacggag
tgcggttgccagttcacctctaaattggaaggcatgttccgggacatgagcatctcaaac
acaaccatggacgagttccgccaacacctacagtcaacggcggtgtcgttgggcggagtt
gatctcacagtgagggtcttgacgacaggttactggccaacgcagtccgccacgcccaaa
tgtaatatccccccttcgcctcgacatgcatttgaagtctttagaaggttttatctggcc
aagcacagcggcaggcagcttacgttacagcatcacatgggctctgcagacctcaatgcc
accttctacggcccaatcaaaaaggaggatggctcagaggtgggggtgggcggcgcccag
gtaacaggctccaacaccaggaagcacatactgcaggtgtccaccttccagatgacaata
ctaatgctcttcaacaaccgggagaagtccatgtttgaggagatccagcaggagacagac
atcccggagagggagctggtgcgtgcgctgcagtcactggcctgcgggaagcccacccaa
cgcgtcctcaccaaggagcccaagtccaaggagatcgagaacggccacatgttcaccgtt
aatgaccagttcacctccaagctgcatcgcgtcaagatccagacagtcgccgctaagcaa
ggagagtcggacccggagaggaaggagacgcggcagaaagtggacgacgacaggaagcac
gagattgaggcggccatcgtccgcatcatgaagtctagaaagaagatgcagcataacgta
ctagtagcagaggtcacccagcagctgcgatcgcgattcctccccagtcctgtagtcatc
aagaagcgcattgaaggactcattgagcgggaatatttggcgcggacaccagaggatcgc
aaagtgtacacttatgtagcataa

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