Oncorhynchus tshawytscha (Chinook salmon): 112265114
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Entry
112265114 CDS
T05605
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112265114
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
112265114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
112265114
NCBI-ProteinID:
XP_024297929
LinkDB
All DBs
Position
LG13:53115319..53190007
Genome browser
AA seq
2115 aa
AA seq
DB search
MSSRRYANIFVLGVTFLVYLTFSKCGTLVRRSARKGHEMQRRTAGRYQHATVNDQVYQTQ
WRMTTTSKPKLKQKQDHFNGKKYWKYATNVTLQLNGTNVCGNRCCHGWTVSPKTQKCTKP
RCLPRCHNGAVCRQPNICECRTGFYGARCEFASVTYGLVGLPWAFLRPTSPMVSTTTTLS
PTTVIPNTTPVPTETTAAWRTEGTPVSTVRWKPLTLQEAQSVLLKKALARGGRGDKMTSI
LMKHIETERKKLQSASPSDLQDTRTTSVKSFHTQKGQYTIHMSPPAARNQTAGHRGGTAA
GVGRRGAERIKVLFTPTVCKVRCTQGRCTNFCEQGNVTALYISEQGDRAALGPGFRVFLC
PMLCQNGGVCIQKDRCLCPPTFTGKFCHIPVATPSTNDIEKPPRSPSVLASQQLLSQSEY
ILPLQSQQQSHSQPSGASGSSMVKVRVQHPPEASVKIHQVLKVGYGPGTVREQSETVTWS
AGLSGASTSVLPGERAAATPPKPRVQAQTLHGNFTNPESSVFKYCFREVRNGQCSSPLPG
LRSQDTCCRGIGLAWGINECVLCPPNTGNGVDGSCPAGFERINDTQCVDVNECLQPGFCE
NGNCVNTRGSYSCVCRQGYILDASHGICISHRVISEDKDQCYRILNSGSGRGSCSVPILR
NITKQICCCSRVGKAWGENCERCPYFGSVAFKEICPAGPGYHYSASVIQFNQRLLEQHGT
GGPPVISQSTGQTRPQQPARGGAQTPQNSHQQSSGSLTPQTRPQQPGITTLLTTPTRPQQ
PGGGALTLQTRPQQPSVEQWSSGGSLSSQGRPHIPASSVTAGPTRVVTARPLTQTQWLPV
DRRPVSPVRPAQPLPPLVTPRPPIPRPVRGVCETMPQVCGQGRCVNQPGGRHTCICNEGY
QLNAQQNQCQDIDECRASLPPCGSGRCQNTDGGYRCSCPSGYQPGPRGTSCIDIDDCRQV
TNPCNNGRCENSPGSFKCVCRTGYTLEGNACKDVDECEDPLRCPVQACANSPGSYKCVSC
PPGFGLLNEQCSDVDECHQTPSLCTNGHCENTPGSYRCVCHTGYKLQGKTCTDVDECEDP
LRCPGQACVNSQGSYNCVSCKPGFRMINGHCSDIDECRQTPSPCTTGHCENTQGSYSCAC
LTGYRLHGDTCTDVDECADPSQCPGQECVNSLGSYKCVSCKPGFELVNRHCTDVDECENA
LQCPGRECINSEGSFICVACSPGFEAGNGQCTDIDECRQTSNLCANGRCENTPGSYRCVC
RTGFKPQGSICIDLDECEDASQCPGQRCVNSEGSYKCIACKAGHGMRDGLCTDVDECQSP
DTCGAARLCVNTDGSYRCDCQPGYRTAGLGRQCRDVNECLEGEYCFPRGECVNTEGSYRC
VCSQGYTTSSDGGSCLDVDECARSGPGACQDGRCVNTEGSYQCQCQVGFTTNPEKTACLD
VDECSEGAVCRSQRCENTVGSYRCITSCEPGYRVTRTGECVDINECANETVCGEHAFCQN
LIGTYQCMCDQGYTATSDGKGCVDENECETMQGVCGTARCENVDGSFMCECPGEGEEFDT
RSGQCLSTPRPGRPAYPGGSSSSSSSSTTGLGPQRRPDASQLPPARPGEFRECYYSTGEQ
SSCSVLAHNTTQQECCCTVGQGWGMGCQYNPCPPLGTAEHQALCPSGRGYVTGPGAFSYK
DVDECKLFHPEVCKSGVCVNNIPGYSCYCTIGYYYDEVFLECIDVDECEAGEDSCPGGIC
VNILGSHFCTCEPPLVLDDTQRSCVNSTDLAVDENLSFCWQFVTADLVCQSPLLGGQVTF
TECCCLYGEGWGLHCALCPARDSEDYEARCNVFLGPPEFPPPFPDPYGPDPGPGPGRGGE
GGGGVGYRVPYGPDSFPDPIPRRPEYPQPDYDDYTPAGGTRSGFRSRTPSTFSVPESPYR
RPSGYIPERYYDEDDYGPPDAPPRPHFRTLPDPRSELAFGARPPPPIREGLPLSLAPLSD
SDPYSEEEEEGPEPWRVGPPFPPFPDRQGPGGGGGPRRVYERRYEPYAGLSTEDCGILHG
CENGRCIRVAEGYTCDCYEGYELDMTSMACIDINECVDPDNACANGRCIDTDGSYRCVCH
QGYVMSRRPNHCVAA
NT seq
6348 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaggagatatgctaacattttcgttcttggagtgacatttcttgtatatctt
acattttcgaaatgtgggacactagtgaggcgttcagcccgtaaagggcacgagatgcag
aggcgaacggcgggcaggtaccaacacgcaaccgtgaatgatcaagtttatcagactcag
tggagaatgacgacgacttcaaaacccaaattaaaacagaaacaggaccattttaatgga
aagaaatactggaaatacgcaactaatgtcacacttcagttaaatgggactaacgtatgt
ggaaacaggtgctgccacggatggaccgtttcacccaagactcagaaatgcaccaaacca
agatgccttccacgttgccacaacggagccgtgtgcaggcagcccaacatctgtgaatgc
cgaacgggcttctacggggcacgctgtgagtttgcaagcgtgacctatggcctcgtaggc
ctaccctgggccttcctgcgccccaccagccccatggtcagcaccaccaccaccctctca
ccaaccaccgtcatccccaacaccaccccagtgcccactgagaccacagctgcatggagg
acagaggggacaccagtcagcactgtgcgctggaaacctcttactctgcaggaggctcag
tcagtgctgctaaagaaggcattggcccgtgggggtcgaggcgacaagatgacctccatc
ctgatgaaacacatcgagacagagcggaagaagcttcaatcagcctcaccgtcagaccta
caggacacccggaccaccagtgtcaagagcttccacacccagaagggccagtacaccatc
cacatgagcccacctgcagccagaaaccagaccgccggccaccgaggaggaacggcagca
ggggtaggaaggagaggagctgagcgcatcaaggtgctcttcacgccgaccgtctgcaag
gtgcgctgcacccagggacgctgcaccaacttctgcgagcagggcaatgtgaccgccctc
tacatcagtgaacagggggaccgggctgcgctgggaccgggcttcagagtcttcctgtgc
cccatgttgtgtcagaacggaggggtctgcatccagaaggaccgctgcctctgcccgcca
accttcaccggcaagttctgccacatccccgtggccacgccctccaccaatgacattgag
aagcctccgcgcagcccctcggtgctggccagtcagcagctgctgtcccagtcggagtac
attctccccctgcagagccagcagcagagccacagtcagcccagcggtgcatctggctca
tccatggtgaaggtgcgggtgcagcacccaccagaggccagcgtgaagatccaccaggtg
ctgaaggtgggctatgggccaggcacggttagggagcagtcggagacggtcacctggtca
gcaggcctctcgggtgccagcaccagtgttctgccaggggagagggccgcagccacacca
cctaaacccagagtccaggcccagaccctccacggtaacttcaccaacccagaatcttct
gtgttcaagtactgcttcagggaggtccgcaacggccagtgcagctcacctctcccagga
ctcaggagtcaggacacctgctgtcgagggattggattggcctggggcatcaacgagtgt
gtcctatgtccccctaacacaggaaatggagtcgatgggagctgtccggctggatttgag
aggatcaacgacacccagtgtgttgatgttaatgagtgtttgcagccaggcttctgtgag
aacggcaactgtgtgaacactcgagggagctacagttgtgtctgcaggcaaggatacata
ctggacgcctctcacgggatctgtatctcccatagggtgatctcggaggataaggaccag
tgctatcgtatcctgaactctggctctggccgtggtagctgctccgtgcccatcctcagg
aacatcaccaagcagatctgctgctgcagccgcgtgggcaaggcctggggcgagaactgt
gagaggtgtccttactttggatcagttgctttcaaggagatctgcccagcagggcctggc
taccactactctgcctctgtcatccagttcaaccagaggttgctggagcagcacgggact
ggaggtccccctgtcatatcccagagcacgggacagaccaggccacaacaaccagccaga
ggtggtgcacagactccccaaaatagtcaccaacaatcttcaggctctctcactccccaa
accaggcctcaacaaccaggtatcactactctgctcaccactccgaccagaccccaacag
ccaggtggtggcgctctcacgcttcagaccagaccccagcagccatcagtggagcagtgg
agcagtggaggctccctgtcctcccagggcagaccacatattccagccagctctgttaca
gcaggacccacccgggtggtgaccgctcggcccctcactcagacccaatggcttccagtt
gaccgacggccagtatctccagtgagacctgcccagcccctcccacctctggtcacgccc
cgcccacccatccccaggccagtgcggggtgtgtgtgagaccatgccccaggtgtgtgga
cagggccgttgtgtgaaccagcccggagggagacatacctgcatctgtaacgagggatac
caactcaatgctcagcagaatcagtgtcaagacatagacgagtgcagggcgtctctcccg
ccctgcggcagcggccgctgccagaacacagacgggggctacaggtgcagctgcccctct
ggataccagccgggaccccggggcaccagctgtatagatattgatgactgtcgtcaggtt
acgaacccctgtaacaacggccgctgtgagaatagccctggtagcttcaaatgtgtctgc
cgcactgggtacacgctagagggaaacgcatgtaaagatgtggatgagtgtgaggacccc
ttgaggtgtcctgttcaggcctgtgccaactctccaggatcatacaagtgtgtgtcttgc
ccgccaggctttggcctgctcaacgaacaatgctcagacgttgacgagtgccatcagacc
cccagcctttgcaccaatggtcattgtgagaacactcctgggagctacaggtgtgtttgc
cacacaggatacaaactacaaggcaagacctgcacagatgtggatgagtgtgaggaccct
ttgaggtgtcctggtcaggcctgtgtcaactctcagggttcttacaactgtgtgtcctgc
aagccaggcttcagaatgatcaatggacattgctcagatatagatgagtgtcgtcagacc
cccagcccatgcaccaccggtcactgcgagaacacccagggtagctacagctgtgcgtgt
ctcactggctacagactacacggtgatacctgtacagacgtggatgaatgtgcagacccg
tcccagtgccctggccaggagtgtgtcaactccctgggctcatacaagtgtgtgtcctgc
aagcccggctttgagctggtcaacagacactgcacagatgttgacgagtgtgagaacgct
ctgcagtgtcctggtcgggagtgtatcaactctgagggctccttcatatgtgtggcctgt
agcccaggctttgaggctggaaacggacagtgtacagatattgatgagtgtcgccagacc
tccaacctatgtgccaacggtcgctgtgaaaacactccgggtagctaccggtgtgtttgt
cgcaccgggttcaaaccgcagggcagcatctgtattgacctggatgaatgtgaagacgcc
tcacagtgtcctgggcaacggtgtgtgaattctgaaggctcctacaagtgtatcgcctgc
aaagcgggccacggcatgcgagatgggttatgcacagatgtggatgaatgccagagccct
gacacctgtggtgcagcgaggctgtgcgtgaacacggacggctcctaccgctgtgactgt
cagccaggctacagaaccgctggcctcggacgccagtgtcgagatgtcaacgagtgtcta
gagggggagtactgcttccccaggggagagtgtgtgaacacagagggctcctaccgctgc
gtgtgctcccagggatacaccaccagcagcgacggcggctcctgcctggatgtggatgag
tgtgccaggtcaggcccgggggcgtgccaggatggccgctgtgtcaacacagagggctcc
taccagtgccagtgccaagtgggattcaccaccaacccagagaagacagcctgtctggat
gtagatgagtgctcagagggagcagtgtgtcggtcacaacgttgtgagaacaccgttggc
tcctaccgctgtatcacctcctgtgagccgggctaccgggtcacccgcaccggagagtgc
gttgatatcaacgagtgtgccaatgagaccgtatgcggggagcatgcgttctgccagaac
ctaattggaacataccagtgcatgtgtgaccagggctacacagccaccagcgatgggaag
ggatgtgtggatgaaaacgagtgtgagacgatgcagggcgtgtgtggcacggcgcgctgt
gagaatgtggatggctccttcatgtgtgagtgtccaggagagggggaagagtttgatacg
cgctcaggacagtgcctcagcacgccccgaccaggtcgtccggcgtaccctggcggctcc
tcctcttcttcgtcttcctccaccaccggtctcggtccccagcgtcggcccgatgcgtcc
cagctgccccctgcccggcctggcgagttcagggagtgttactacagcaccggggagcag
agctcgtgcagcgtcctggcccacaacaccacccagcaggagtgctgctgcaccgtgggc
cagggctggggcatgggctgccagtacaacccctgtcctccgctaggcacagccgagcac
caggcgttgtgccccagcggacgaggatatgttaccgggccaggtgcatttagctacaaa
gatgtggatgagtgtaagctgttccaccctgaggtgtgtaagagtggtgtatgtgtcaac
aacatccctggctactcctgctactgcaccattggctactactacgacgaggtgtttctg
gagtgcatcgatgttgatgagtgtgaggcaggggaggacagctgtccagggggaatctgc
gtcaacatattaggctcacacttctgtacctgcgagcctcctcttgtgttggacgacact
cagcgcagctgtgtcaattccactgacctcgccgtagatgagaacctatcgttctgctgg
cagtttgtcacagcagacctggtgtgtcagagccccctgctgggtggacaggtcaccttc
actgagtgctgctgtctgtatggagagggctggggactgcattgtgctctgtgtcctgcc
agagactcagaggactatgaggctcgatgtaacgtcttcctggggcccccagagtttcct
ccccccttccctgacccctacgggccggacccagggccaggacccggcagaggaggagag
ggaggaggaggagtggggtatcgcgtgccctatggaccggactccttcccagaccccatc
ccccgcaggcctgagtacccccagcctgactatgacgactacacaccagcgggaggcacc
aggtctggcttcagaagcagaacgcccagcaccttcagcgtcccagagagcccatacaga
cggccctcaggatacattcctgagcggtactatgacgaggacgactacggcccgcctgac
gctcctccgagaccccatttccggaccctcccagaccctcgttctgagcttgcctttggg
gcgcgaccccctccccccatccgagagggcctccctctgagtctggcccccctctcggac
agtgacccctacagtgaggaggaggaggaggggccagaaccctggcgtgtgggaccccct
ttccctccgttccctgacagacaggggccaggtggtggtggtggcccacggagagtctat
gagagacgatatgagccgtatgcaggcctgagcacagaggactgtgggatactgcacggc
tgtgagaatggcaggtgtatccgggtggcggagggatacacgtgtgactgctacgagggc
tacgagctggacatgacctccatggcctgcatagacatcaatgaatgtgtggatcctgac
aacgcgtgtgcgaacggccgatgcatcgacacagacggctcctatcgctgtgtgtgccac
cagggctacgtcatgtcccgccggcccaaccactgtgtggcagcataa
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