Oncorhynchus tshawytscha (Chinook salmon): 112265118
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Entry
112265118 CDS
T05605
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X3
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112265118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112265118
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112265118
Intermediate filaments
Intermediate filament-binding proteins
112265118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
TMP_3
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
112265118
NCBI-ProteinID:
XP_024297934
LinkDB
All DBs
Position
LG13:complement(53214059..53266219)
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AA seq
1448 aa
AA seq
DB search
MLMARDTSRDETQKLHKKWLKHQAFMAELAQNKEWLGKIEREGQQLIQEKPELGPVVRRK
LGEIHECWQDLESTTQAKARQLFEANRADLLVQSYTSLDHQLHQLEGQLGYVDQGQDLTS
VNKQLKKLQTMECQMEEWYKEVGELQVAAASVPQQGQVMDTVSERQSAVETRIVRLIEPL
KERRRILLASKEVHQVGRDLEDEILWVQERLPAATSQEHGSSLQAVQQLMKKNQTLQREL
QGHRARVEDVLERANVIASIRSPEADCVRAGLEQLSGLWGLLWAETERRQLVLDAMYQAQ
QYYFDTAEVEAWLSEQELHMMNEEKGKDEPSTLQLLKKHLVLEQTIEDYAETIGLLSQQC
RQLLEMGHPDSEQISKRQCQMDRLYVSLKDLVEERKSRLEQQYWLYQLNHEVDELEQWIA
EREVVASSPELGQDFEHVTILQEKFTEFASETGSLGQERVTAVNQMVDELIDYGHADAAT
IAEWKDGVNEAWADLLELMETRAQMLAASHQLHKFFTDCREVLAQIDDKQRRLPEVRARQ
GGTANTSTLQRLMQSFEHDIQLLVTQVRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCW
KDLLTSCEECRVQITTATDKLRFFGVVRDQIMWMDSIISQIGTGDNPSIPSSDITGSGLS
GPFRDVSSVEVLMNYHQSLKSEVEARSKSVLQCIEMGKTLLAARNPAAEEIKEKLDTVVA
KQYELSEKWDKHWEVLQHMLEVHQFAQEAVVAEAWLTAQEPFINSKELGASVDEVEQLIR
RHEAFRKAAATWEERFSSLRRLTTVEKMKAEQSKLPPTPLLGRKVFLDPQETSPARSQGS
PLMRRILYEQAEPRAERPPQEPSPSSVARRLGSTVANYTPIMNGSSGYRSSLEAQAIPMM
GGVAGGVVGVAARLGTAAVEATNLGTTAAMEVRGVAAGFGTAASEARGLAAGLVTPSVEA
KGIAASFVTGAAAAVEVKASQYLRQPKIKHMDDMVTPMLVACRLEKAREKEVREREQRER
ERDIVLMEPAPVMPVMAEVVLQEMGREGMGRERLNSEPSSRDHRAGSSRSEPQQRDRDRD
SRDSRDSHREARLERQHSSEALMIQARRDELPQEVWRERAERKERKLERQTSSEQEGHGH
EGRRKDRHRTERQESSEHDTAKEQSDRRSTEKKSGGQTLFDIVEQLKEREAATARGEVPK
VPNGVPEKSSGRPDRPRARDRPKPRRRPRPKDPSAGEATTRRSRSAPEPGVAQGVSPSVP
QPPSHTAHHEGFLFRKLDIETMRKSSNRSWVNLYCVLNKGKIGFYKDAKNTATPYNNEPM
LNLGHCHCDVTLGYKKKKNVFTLKTKDGSEFLFHAKDESQDDLKAWTTNINKSIAEHEEI
AKWGQPQPTTSSTDEGTRRDGSKADNKSERGEKSDRGERPQRAERSERSDKGETKSDTKR
SEKSSKKK
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggctcgtgacacgtcccgcgatgagacgcagaagctgcacaagaagtggctg
aagcaccaggctttcatggccgagctggcccagaacaaggagtggctggggaagatcgag
agggagggccagcagttgatccaggagaagcccgagctgggcccggtggtgcggaggaag
ctgggggagatccacgagtgttggcaggacctggagagcaccacccaggccaaggcccgc
cagctgtttgaagccaaccgggctgacctgctggtgcagagctacaccagtctggaccat
cagctgcatcagctggagggacaactgggctacgtggaccagggtcaggacctgaccagc
gtcaacaagcagctcaagaagctccagacgatggagtgtcagatggaggagtggtataag
gaggtgggggagctgcaggtggcggcggcctccgtcccccagcagggccaggtcatggac
acggtcagcgagcgccagtccgccgtggagacgcgcatcgtccgtctcatcgagccgctc
aaggagcgccggcgcatccttctggcctccaaggaggttcaccaagtgggccgggacctg
gaggatgagatactgtgggtgcaggagcggctgcctgccgccacgtctcaggagcacggc
tccagcctacaggctgtgcagcagctcatgaagaagaaccagactctgcagagggagcta
cagggccatcgggcaagggtggaggacgtcctggaaagagctaatgtcatcgcctccatc
cgcagccccgaggctgactgtgtgcgggcgggcctggagcagctcagcgggctgtggggt
ctgctgtgggccgagacggagagaagacagctggtgctggatgccatgtaccaggcccag
cagtactactttgacacggccgaggtggaggcctggctcagcgaacaggagctgcacatg
atgaacgaggaaaagggaaaggatgagcccagcacactgcagctactgaagaagcacctg
gtactggagcagacgatagaggactacgctgagacgataggccttctctcccagcagtgc
aggcagctactggagatgggacatccagacagtgagcagatcagtaagcgtcagtgtcag
atggaccggctgtacgtgtctctgaaggacctggtggaggagagaaagtctcgtctggag
cagcagtactggctctaccagctcaaccacgaggtggacgagctggagcagtggatcgct
gagagggaggtggtggccagctcgccagaactgggacaggactttgaacacgtcacgatc
ctgcaggagaagttcacagagtttgcgtcggagacgggcagtctgggtcaggagcgtgtg
acggcggttaaccagatggtggatgagctgatcgactacggccacgccgacgccgccacg
atcgccgagtggaaggacggcgtgaacgaggcctgggccgacctcctggagctcatggag
acccgggcacagatgctggccgcctcgcaccagctccacaagttcttcaccgactgccgc
gaggtcttggcccaaatcgatgataagcagcggaggttgcccgaggtgcgggcgcgccag
ggtggcaccgccaacaccagcacgctgcagaggctcatgcagagcttcgagcacgacatc
cagctgctcgtcactcaggtgaggcagctccaggagagtgcgggtcagctccggaccatc
tacgccgggcagaaggctgaggccatcgccggccgggaacaggaagtgatgcattgctgg
aaggatctcttgacttcctgcgaggagtgccgagtgcagatcaccacggcaacagacaag
ctgcggttcttcggggtggtgcgagaccagatcatgtggatggacagcatcatctctcag
atcggcacaggggacaatccaagcattccctccagcgatataacgggctctggactctct
ggtcctttcagggatgtgtcctcagtggaggtactgatgaactaccaccagagcttgaag
agcgaggtggaggcgcgcagtaagagtgtgctgcagtgcatcgagatgggcaagacgctg
ctggccgcgcgcaaccctgctgctgaggagatcaaggagaagctggatacggtggtggcc
aagcagtatgagctgtctgagaaatgggacaaacactgggaggtcctgcagcacatgctg
gaggtgcaccagtttgcccaggaagcggtggtggccgaggcctggctgacagcccaggag
cccttcatcaacagcaaggagttgggcgccagcgtggacgaggtggagcagctcatccgc
cgccacgaggccttccgcaaggccgccgccacctgggaggagcgcttcagctcgctacga
cgcctcaccacggtggagaagatgaaagcggagcagagtaagctccctcccacccccctg
ctgggtcgtaaggtgttcctggacccccaggagacgtcccctgcccggagccagggctcc
cccctgatgagacggatcctttacgagcaggccgagcccagagccgaaaggcccccccag
gaaccctcgccctcttccgtggcccgccgcctgggctccaccgtagccaactacaccccc
atcatgaacggctccagtggctaccgcagcagtctggaggcccaggccatccccatgatg
gggggagtggctggtggtgtagtcggggtggcagccaggctgggaacagccgctgtggag
gcaacaaatttagggaccaccgccgccatggaggtccgaggggtggcagcaggatttggg
actgccgcctctgaagccagagggttggcagcaggattggtcaccccctcggtcgaggcc
aaagggatagctgcaagctttgtgactggggcagccgccgcagtggaggtgaaagcctcg
cagtacctccggcagcctaagatcaaacacatggacgacatggtgacgcccatgctggtg
gcctgtaggctggagaaggcgagagagaaggaggtgcgagagagggagcagagagagagg
gagagagatattgtgttaatggagccagcgcccgtgatgccggtgatggccgaggtggta
ctccaggagatggggagggaggggatgggcagggagaggctgaacagcgagcccagcagc
agagaccaccgggcggggagcagccggtcggagccccagcagagagacagggacagagac
agtagggacagtagggacagtcacagggaagccaggctggagcgccagcactctagtgag
gcgctgatgatccaggcgcggcgggatgagctgccccaggaggtgtggcgggaacgggcc
gagcgcaaagagaggaagctggaaaggcagacgtccagcgagcaggagggccacggacac
gagggccggaggaaagaccgccaccggacggaaagacaggagtccagtgaacacgacaca
gccaaggagcagtcagacagacgttctacggagaaaaagtcaggtggccagaccttgttt
gatatagtggagcagctaaaagagagagaggcagcaacggcacgaggggaggtccctaaa
gtgccgaacggcgtgccagagaagtcttccggacgtccagaccggccgcgagcaagggat
cgtcctaagccccgacggagaccccggcccaaggacccatctgcaggagaggccaccacc
cggcggtcgcgctcggcgccggagccaggggtggctcagggcgtgagcccttcggtcccc
cagcctcccagccacacagcccaccacgagggcttcctcttccgcaagctggacatcgag
accatgaggaagagctctaacagatcctgggtcaacctgtactgtgtgctgaacaaagga
aagataggcttctataaggacgctaagaacaccgccacaccttacaacaacgagcccatg
ctcaacctcggccactgccactgcgacgtcacccttggatacaagaagaagaaaaacgtc
tttactcttaaaacgaaagacggaagtgaatttctgttccacgcaaaggatgagtcacag
gatgatctaaaggcctggaccaccaacatcaacaagagcatcgcagagcatgaggagatt
gccaaatggggtcagccccagcctactacctcatccacggacgagggcacgcgccgcgac
ggcagcaaggccgataacaagtcagagcggggagaaaagtctgaccggggggaaaggccg
cagagagccgagcgctctgagaggtcggataagggtgagaccaaatcggacaccaagcgt
tcagaaaagtccagcaagaagaaatga
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