Oncorhynchus tshawytscha (Chinook salmon): 112265127
Help
Entry
112265127 CDS
T05605
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112265127
04121 Ubiquitin system [BR:
otw04121
]
112265127
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
112265127
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Atypical E3
112265127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
112265127
NCBI-ProteinID:
XP_024297955
UniProt:
A0A8C8CEM0
LinkDB
All DBs
Position
LG13:complement(53425801..53430888)
Genome browser
AA seq
623 aa
AA seq
DB search
MSSPQSYSRRQWCCYLCDLPKMPWAMIWDFSETVCRGCVNYEGTDRIEFIIETARQLKIT
HVMQDDRSPCPQPTKHGPGGRDGPMEGGRPLPERFERGRGDYGAPARIPNGLHRIDDGGP
QQELSGQSPNNARRPMGGTVPPNLMTQGLVGAPHGLLAAVPGLNARVGGAPLTLSAPMLN
EITKRQLSMGMSVASFLSPEFEKELREKQRNAEALAELSESVRNRADDWAGRPKAVRGAL
LTLSGCTPFNVRFKKDHSLVGRIFAFDAKLALDFELKIFAEYPCGSGNMFSSLAALVKQM
FHDSQRDSGSKMVNSGLKYVEYEKRHGAGDWRLLSELLSDAVRAFKDTPGPDVLPQPYLD
ASCSMLPTALCHMSRSAPPVRGRRRKASPEPQGGEVVTTEEQLRQHWPMGMYPGMAIHLA
ASSFPSVSQPPPHQEGSASHSHSSDPSPITALMSVAESPREAPSSSSSGGGLGHSSLAVR
QSSSSPMAACPAGQQRRLASRNGEPQGASNSAAGTTAALPLAGASDQGAGDPSGSSGPPL
CCTICHERLEDTHFVQCPSVAAHKFCFPCTRDFIRRQGAGSEVFCPSGERCPLVGSNVPW
AFMQGEIATILAGDVKVKKERDP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccccagtcatattcaaggcggcagtggtgttgttacctttgcgatttgcct
aagatgccatgggctatgatctgggactttagcgagactgtctgccgaggctgtgtgaat
tatgaaggtacggaccgtattgaatttatcatagagacggcaaggcagttgaaaataact
catgttatgcaggatgacaggtcgccgtgtccccaacccactaaacatggcccaggtggg
agagatggacctatggagggtggcaggccacttcctgaacgctttgaaaggggaagaggg
gactacggagccccagcacggatccccaacggtctgcacagaatagatgacgggggccca
caacaagaactcagtggacagagccctaacaacgccagaagacccatggggggtaccgtt
ccgcccaatttaatgacacaaggccttgtgggggctccacacgggttgctagcagctgtg
cctggtttaaatgccagagtcgggggagcccccctcaccctctctgcccccatgctgaac
gagatcaccaagaggcagctgagcatgggcatgagtgtggcctccttcctgagccctgag
tttgagaaggagctgagggagaagcagaggaacgcagaggctctggccgagctgtcagag
agtgtacggaaccgagcagacgactgggccggccgacccaaggctgtacgaggggccctg
ctcaccctctccggctgcacccccttcaacgtgcgcttcaagaaggaccacagcctggtg
ggacggatctttgccttcgacgccaagctggcgctggactttgagctgaagatctttgcg
gagtacccgtgcggctcggggaacatgttctccagcctggcggcgctggtcaagcagatg
ttccatgacagccagagagactcagggagcaagatggtcaactcgggcctaaagtatgtg
gagtacgagaaaaggcatggcgcgggggactggcgactgctctctgagctgctgagtgat
gcggtaagggcctttaaggacacccccggccctgacgttctcccccagccctacctggac
gccagctgctccatgctgcccacagcgctgtgtcacatgtcccgctcggcaccgccagtc
cgcgggcgccggaggaaggcttccccagagccccagggtggagaggtagtgaccacagag
gagcagctccggcagcactggcccatggggatgtacccgggaatggctatccacctagct
gcctcctccttccccagcgttagccagccacctccccaccaggagggctcggcctcccat
tcccacagcagcgacccctcccccatcacagcactgatgagcgtggctgagtcacccaga
gaggcccctagcagcagcagtagtggtggaggcctgggccactcctccttggcagtgagg
caaagcagcagcagccccatggcagcctgccctgcggggcaacagcggcgcctggcctcc
aggaatggggaacctcagggagccagcaactctgcagcgggcactacagcagctctcccc
ctggctggggcctcggaccagggagcaggggacccctccggctcctctggtccccctctc
tgctgcaccatctgccacgagcgcttggaagacactcactttgtccagtgcccctcggtt
gcggcccataagttctgcttcccttgcaccagagacttcatccggagacagggggccggc
agcgaggtgttctgccccagtggggagcggtgtcccctggtgggctccaacgtgccctgg
gccttcatgcagggagagatcgctaccatcctggctggagatgtcaaggtgaagaaggag
cgcgacccctaa
DBGET
integrated database retrieval system
