Oncorhynchus tshawytscha (Chinook salmon): 112265192
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Entry
112265192 CDS
T05605
Name
(RefSeq) limbic system-associated membrane protein isoform X1
KO
K06772
limbic system-associated membrane protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112265192
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
IgLON family
112265192
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GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_5
Izumo-Ig
Ig_4
Ig_6
V-set_CD47
C2-set_2
Ig_PDGFR_d4
Zwei_Ig_N
Ig_C17orf99
C2-set_3
Sp38
VWA_N
Motif
Other DBs
NCBI-GeneID:
112265192
NCBI-ProteinID:
XP_024298052
LinkDB
All DBs
Position
LG13:55159896..56326209
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AA seq
337 aa
AA seq
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MLVGRRPCWRQLQASFFRLLCLIPTGFPVRSVDMQRATDNITIRQGDTAVIRCYVDDKVS
KVAWLNRSNIIFAGEDKWSLDPRVDLVNKGQLEYSLRIQKVDVYDEGSYTCSIQTKQQSK
TSNVHLIVQVPANIYKVSEDITVNEGSNVTLSCLANGRPDPSITWRLLNPSADSLDGEEY
LDISGIMRNQAGRYECKASNDVATPDVKYVNVVVNYPPAIKNAKSSETQVGRMGVLQCDA
AAVPKPEFEWYRDDKRLSNAQGISIQIVGTTTVLMISNVTEEDYGNYTCVATNKLGIQNA
SLFLYRPGTGRDINGAACLSQSLWLLLASITCLLFKC
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcggaaggagaccgtgttggaggcaattgcaggcttcttttttcagactcctg
tgtcttattcctacagggttccccgtccgaagtgtggatatgcagcgagcgaccgacaac
attactatccgccagggtgatacagcggttatcaggtgttacgtggatgataaggtgtcc
aaagttgcctggctcaaccgatccaacatcatcttcgctggggaggacaagtggtcgctg
gacccgcgtgtggacctggtgaacaagggccagctggagtacagccttcgcatccagaaa
gtggatgtgtacgacgagggctcctacacatgctccatccagaccaaacagcagtccaag
acctctaatgtccatctcattgtccaagttccggcaaacatttacaaagtttcggaagac
atcactgtgaacgaaggcagcaatgtgacattgagttgtctagccaatgggaggccagat
ccatcaatcacctggcgactgctcaatccatcagccgattctctagatggggaggagtac
ctggatatatcggggatcatgaggaaccaggcgggccgctacgaatgcaaagccagcaat
gacgtggccacaccggatgtcaaatacgtcaatgttgtcgtcaactatcctcccgccatc
aagaatgccaagagctctgaaacccaggtgggccgaatgggggttcttcagtgtgacgcg
gccgcagtgcccaaaccagagtttgagtggtacagagatgacaagaggctatccaacgcc
cagggaatcagcatccagatcgtagggaccacaactgtcctgatgatctccaacgttaca
gaagaggactatggaaactacacatgtgttgcaaccaacaaactcgggatccaaaatgct
agtctcttcctctatagacctgggacgggtcgagacatcaacggcgccgcctgcctatcc
cagtcactgtggctcctcctggcctccatcacctgccttctcttcaagtgttaa
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