Oncorhynchus tshawytscha (Chinook salmon): 112265251
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Entry
112265251 CDS
T05605
Name
(RefSeq) homeobox protein OTX1 B-like isoform X1
KO
K09326
homeobox protein OTX1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112265251
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112265251
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
CPSF73-100_C
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112265251
NCBI-ProteinID:
XP_024298158
UniProt:
A0AAZ3RFA5
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All DBs
Position
LG02:complement(61976612..61982381)
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AA seq
363 aa
AA seq
DB search
MMSYLKQAPYGMNGMGLSGTAMDLLHPSVGYPDRNGFEEFPLTGFYSISAHPRKQRRERT
TFTRTQLDILESLFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQSGNNS
KVRPAKKKSSPTRESTGSESSGQFTPPAVSSTGSSSSSSASSGGSHPSGHGGQGLSSTST
SVTAPVSSIWSPAPISPAPAPPPVPDPTPPTSASCMQRSVSGTGGTSSYPVSYSQTAASY
GQGYPAPASTGSYFGGVECSSYLAPMHSHHHPHHPHQLSPMTGSSMSGHPHHHIGQTSGH
HHHHHPHHHQAYSGAGLAFNSSDCLDYKEQTAAAAASSWKLNFNTTDCLDYKDQASSWRF
QVL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacaggccccgtacggcatgaacggaatggggctcagcggtacg
gccatggacctactgcacccatcagtggggtatccagatcgaaatggcttcgaagagttt
ccattgacaggtttctattccatttcagcgcatccgaggaaacagcggagagagaggaca
acttttactcgcactcagctggacattctggagtcccttttcggcaagacgcgctaccca
gacattttcatgcgggaagaagtcgctctgaaaatcaatttgcctgagtctagagtccaa
gtatggttcaagaacaggagagccaagtgccgtcagcaggcccagagtggaaacaattct
aaagtccggcctgccaagaagaagtcctctccaaccagggagagcacaggctcagagagc
agtggtcagttcacccctccggcagtgtccagcaccggctcctcttcctcttcctctgcc
tcgtccggtggctctcatccctccggccatggaggccaaggcctgagcagcacttctacc
tccgtcactgccccagtgtcctccatctggagccctgcgcccatctccccagcccccgca
ccaccccctgtccccgaccccactcccccaaccagtgcctcctgcatgcagaggtctgtg
tcaggtactggaggcacgtcctcctacccggtgtcctacagccagacagcggcgtcctat
gggcagggctaccccgccccggcgtcaacgggctcctacttcggaggggtggaatgcagc
tcgtacctggcccccatgcactctcaccaccacccccaccatccgcaccagctcagcccc
atgacgggctcctccatgtctggccacccgcaccaccatatagggcagacctcagggcac
caccaccatcaccacccccaccaccaccaggcctacagcggggccggcctggccttcaac
tcctcagactgtctggattacaaagaacaaacggccgcggccgcagcctcttcatggaag
ctcaacttcaacaccactgactgcttggactacaaagaccaggcctcctcttggcggttc
caagtcttgtga
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