Oncorhynchus tshawytscha (Chinook salmon): 112265257
Help
Entry
112265257 CDS
T05605
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112265257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112265257
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
112265257
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
112265257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
MFS_3
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
112265257
NCBI-ProteinID:
XP_042168768
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MAEKGNKRKQRSLSITKRKGYVGSKDGKKSANACPGTASISSFFNNAPPPRLPCPLCGQL
VPRFRINQHIDSQCQNFQREDGASIDTASACNIVTTTKLASSHSPSRRASKDHDPDTGPS
CPKEEKPQREANTSPYFKKSGASSSSQQVNTREMSSKTVVRPIDICSRLSSKLSRRGLKQ
RLKSPEDIQSQVDDIITIQESPERDKRSEELSSSQKENHLPQGFGDQTTCLMDTETTNVT
VESHSTISLGRPQVESREETLECLESKSESKLESLSPVVSMAPRPLSYAPSRLNKRKKGG
KAEVSVKTQRMSTRSKKDRCEKRDGEEPDDDLTRNKLLTSTTTTADDDKQHGTEESSTGN
CDTLLKSSTEVPEEEHQRRKVKLEEEGEQEQEESTVTGSSDQLTEPDTDRGTDKQDSDSP
RLPYYLGNFLTVLEAVLENEDDRMLFNQEDLSAIHGFERLSVTGQKLYVRLFQRKRKWLQ
VNKLNYNEISTDLGPVAQELVEGGFLQTDSDLQELGEVLDLLPAPELRSLAKTFHLGGPG
SGTQKHQLVEGLLKLSRQRSLFALAPGQNNIGTVILKRAKQLAGSCVRLHRGPRAVFSRV
LLLFSLTDGLEEEETAGGGQGQLYTILLVNSGRLAFPDYTVQRRAKLFLDREDLIRYEAA
MRALQEVITAMQTGHWEDALGLYTAAKTTWQETSKTYDLSHQEELPVFLRCFTTGWAYTR
ILSRGVEVLQRLRCYKEAVKELRSLLSQSVYCPDSRGRWWDRLALNLQQHLKLPEQAISS
IRDGLSDPLVRTGHQLSLHQRANRMKESPSYKNYHPVLSDLPTIHVNDVTHVTIRGQLFP
HEGGTGKNVFLMPAEEGAEGGYSTVMCSVEELSLAHYRRQGFDQGIHGEGSTFSTLFGLL
LWGVIFMEGIPDVFRNPYQPCPLDLFTDCFYGNRREAIETRVQVLCEASIETLHNLMAEA
WTDQEGKMCSLVNWERFSSLQRAQSLVSCLGGSFLGGMITRMAKDYRHCRAGLPDLVVWN
TSNNTYKLVEVKGPSDKLSQKQQIWLDELQRLGADVEVCHVTATGARGAWLE
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaagggaaacaaacgcaaacagagaagcctctcaataacgaagaggaaagga
tacgtcggtagtaaagatggtaagaaaagtgccaatgcatgtcctggtacagcctccatc
tcatcattcttcaacaacgccccgccacctagactgccatgtcctctgtgtggtcagcta
gtgccacggttcaggataaaccaacacattgactcacagtgtcagaactttcagagggaa
gatggtgcgtccattgatactgcttcagcctgtaacattgttactacaacaaagctggca
tcgtctcactctccttccaggagagccagtaaggaccatgatccagacacagggccttcc
tgtccaaaggaggaaaagcctcagcgagaggccaacaccagcccatactttaaaaagtct
ggtgcttcttcttcttctcagcaggtaaacaccagagagatgagcagtaagactgtagtc
aggcccattgacatatgtagcaggctgtcctctaagctctccaggaggggcttgaagcaa
aggctgaagtctcctgaggacatacagtcgcaggttgatgacatcatcaccatccaggag
tccccagagagagacaaaaggtctgaggagctgagcagctctcagaaggagaaccacctc
cctcagggatttggtgaccagacaacatgcttaatggacacagagacaacaaatgtcaca
gtggaaagtcacagtactatttcactgggcagacctcaggtagaaagcagagaagaaact
ttagaatgtttagaatccaaatctgaatctaaattagaatcattgtctccggtagtttct
atggccccgcgacctctgtcctatgctccatccagactgaacaagaggaagaaaggaggg
aaagcggaggtctctgttaaaacacagaggatgtctactcgcagcaagaaagacagatgt
gagaagagagatggtgaagaaccagatgatgacctcactagaaacaaactccttacgtca
acaacaacaacagctgatgatgataagcaacacggaacagaagaatcttcaactggtaac
tgtgacactcttttgaagagcagcacagaggtgcccgaggaggagcatcagagaagaaaa
gtaaaactagaggaagaaggagaacaagaacaagaagaatccacagtgaccggtagcagt
gatcagctgacagagcctgacacagacagaggaactgataagcaagattccgactcacca
cggttaccatactacctgggtaacttcctgaccgtgttagaggcagtgctggagaatgaa
gacgataggatgctgttcaatcaagaagacctttcagccatacacggctttgagcgtctg
tcagtgacaggacagaagctgtatgtgagactgttccagaggaaacggaagtggctccag
gtcaacaagctaaactataatgagattagcactgacctgggacctgtagctcaggagctg
gtggaaggaggtttcctacagacagatagtgacctccaggagcttggggaggtgctggac
ctgctgcctgccccggagctccgtagcctggctaagacgttccacttggggggtcctggg
tctggtacccagaaacatcagctggtggagggactcctgaagctgagcagacagaggtct
ctgtttgccctggcccctggacagaacaacattgggactgtcatactaaagagggcgaag
cagctagctggttcctgtgtacgtctgcatcgcggccccagggctgtgttctctcgcgtc
ctcctcctcttctccctgacagatggtctggaggaggaggagacggccggagggggtcag
ggtcagctctacaccatcctactggtcaactctggccgactggccttccctgactacacc
gtacagcgcagagccaaactgttcctggatagagaagatcttatcaggtacgaggcggcg
atgcgagcgctgcaagaggtgatcacagccatgcagacaggccactgggaggacgctctg
ggactttacactgcagccaagacgacctggcaggagacgagcaagacgtacgacctcagc
caccaggaagagctgccagtgttcctgcgctgtttcaccacaggttgggcctacacacgc
atcctgtccaggggagtagaagtactgcagagattacgttgctacaaggaagcggtgaag
gagctgcgctcactattgtcccagtcagtctactgtccagacagcagggggcgatggtgg
gacagactggcactcaatctccagcagcacctcaaactacctgaacaggctatcagctcc
atcagagacggtctctctgaccccttggtgaggacaggccaccagctttcactccaccag
agagccaataggatgaaggaatcccctagctacaagaattaccaccctgtactcagtgac
ctgcctaccatccacgtcaacgatgtcactcatgtcactatccgagggcagctcttcccc
cacgagggggggacagggaagaatgtgttcctcatgcctgctgaggagggggcagaggga
ggatactccactgtcatgtgttctgtggaagagctgtcactggcacactaccgtcggcaa
ggctttgaccaagggatccatggagagggctccacgttttccactctgtttggtcttctg
ttatggggcgtcattttcatggagggtattccagacgtcttccggaatccctaccagccc
tgcccactggacctcttcacagactgtttctatgggaaccggagggaggcgatagagacg
cgtgtgcaggtgctctgtgaggcgtccattgagacgctgcacaacctgatggctgaggcc
tggaccgatcaggaggggaagatgtgttcactggtcaactgggagcgcttctcatccctg
cagcgggcacagagtctagtgtcttgtctgggtggatcgtttctgggagggatgatcact
aggatggccaaggactacagacactgtcgagcaggactgcctgacctagtggtgtggaac
acatccaacaacacctacaagctggtggaggtgaagggccctagcgacaaactgtcccag
aagcaacagatctggttggatgagctacagagactgggggctgatgtagaggtttgtcac
gtcactgccaccggggccagaggagcttggctggaatag
DBGET
integrated database retrieval system
