Oncorhynchus tshawytscha (Chinook salmon): 112265280
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Entry
112265280 CDS
T05605
Symbol
rinl
Name
(RefSeq) ras and Rab interactor 3 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265280 (rinl)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112265280 (rinl)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
Motif
Other DBs
NCBI-GeneID:
112265280
NCBI-ProteinID:
XP_024298192
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All DBs
Position
LG13:57065267..57078035
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AA seq
840 aa
AA seq
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MMRGLEDQDEKDASHRGVSGTVRTENEVTDGVSRRPLTLLDRLRLCQDAWAPGGPWDRDG
AHAALWGRPAGSFLVLRDSASQPVLLCVATGGESGHVRDNPIHRTGAAYQLSQSFLGFSD
LAQLVVFYSMSRDVLPVCLFIPPWLYSLTDQPQSNSLSQLGPKSWLCPTSDLQPDHMTQR
APGTAMCTIQLTAANGALCIINPLYLHEHGDDWLTHQPTSPQRVNRTANYRRERRLSTTR
PWSGSGLLTKRAISMEQESYSSRSDNPVQATPSPPTPIGGVVMRRPSRDASIESLDRTWT
QDRTTRPPSDPKPLFSPAPQSPHRVSWVEDRVWLSKPPPPSLLRPPSLEMDSLSISSMEE
EPESVTTPSHSPHPSHRLADKVKHRLSAVGLAIGGLGSPQKRMTKRVQELSKRRGGLFAE
AVMGFVEMTLGAAFIPGMTGADLLQEVRTALTALRETLLDCPEIHILIDSMADTPDGELD
AILELSLHKVALKPVSAHLYTCLQSCWDHDGSLRKLRENQRLLEGRGVEELEGTPGAGVP
DHVTLEKIQQRWSAMHQSYSPSRKVHILLKVCKTIYHSMTSNANPGVVYGADDFLPCLTW
VLLRSDVVTLQLDTNYMMELLDPTQLQGEGGYYLTSLYASLFYISSFRPRLVTRQLSTEA
QQSLSQWHRRRTLHCNQSRRSMNRRTLRRPGHSEKGRENSSYAEMETGTGSVTDAPPAPS
SVVAKALHIISEVVVAVREEEGSRAEGQGSPAPQLQASPRKEKPITVEELDGHPAGSEVD
WEGGVRPWRCVVEGLESEEGQASLHRVHEELCARSVELDDQTDTQIGQQRSEWTGLPVGD
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggggattggaagatcaggatgagaaggatgcctctcacagaggtgtgagtggc
acggtgaggacagagaatgaggttactgacggagtttcaaggaggcccctgactctgctg
gacaggttgcgactgtgtcaggacgcctgggcccctgggggcccctgggatagagacggt
gcccatgctgccctctggggccggcctgctgggagcttcctggtgttgagggactctgcc
tcccagcccgtcctgctgtgtgtggccactggaggagagagtggacatgtcagagacaac
cccatacatcgcactggtgcagcttatcagctatctcagtcatttttagggttctctgat
ctggcccagttagtggtgttctactctatgagcagggacgtgttgccagtgtgtctgttc
atccctccgtggctctacagtctaacagatcagccacagtccaacagtctgtcccagctg
ggtcccaaatcctggctgtgtcccacctctgacctccagcctgatcacatgactcagagg
gctcctggtactgccatgtgcaccatacagctgacagcagccaatggtgctctgtgcatc
atcaacccactctatcttcatgagcatggcgatgactggctgacccatcaaccaaccagc
ccacagcgagttaatcggacagcgaattataggcgtgagagacgactgagtacaacaaga
ccttggtcagggtcgggccttcttactaagagagctatctcaatggagcaggagtcctac
agctccaggtctgataatccagttcaggctaccccgtctccccccaccccaataggaggg
gtggttatgaggaggcccagtagggatgcttccattgagtcactcgacagaacctggacc
caggaccgcactaccaggcccccctcagacccaaagcccctgttcagccctgcccctcag
tcccctcacagggtgtcctgggttgaggacagggtatggctctccaaaccgccacccccc
tccctcctccgccccccctccctggagatggactcgctgtcaatcagcagcatggaggag
gagccggagtcggtcaccaccccttcccactccccccacccctcgcatcgtttggccgac
aaggtgaaacaccgcctctcggctgtgggcctggccattggtggactggggtctccacag
aagaggatgaccaagcgggtgcaggagctcagcaagcggaggggcggtttgtttgccgag
gcagtgatgggattcgttgagatgaccctgggggcggcgtttatccctggaatgacaggt
gcggacctgcttcaggaggtgcgtacggctctcactgccctgagagagacactgctggac
tgtcctgagatacacatcctcatagacagtatggcagacacacccgatggggagctggat
gccatactggagctctccctacacaaggtggccctaaagcctgtgagcgcccacctgtac
acctgcctccagagctgttgggaccatgacggtagcctgcggaagctgagggaaaaccag
cggctcctggaaggccggggggtggaggagctggaagggacacctggggcgggggtccct
gaccatgtcaccctggagaagatccagcagaggtggtcagccatgcaccagtcttactcc
cccagcaggaaggtccatatcctgctcaaggtctgcaagaccatctaccacagcatgacg
tccaatgccaacccaggagtggtgtatggggctgatgacttcctgccgtgtctgacctgg
gtgcttctgcgtagtgatgtggtcactctgcagctggacactaactacatgatggagcta
ctggaccccacacagctgcagggagagggaggttactacctgacgtccctgtatgcttct
cttttctacatcagcagcttccgccctcgtctcgtcacgcgccagctcagcaccgaggcc
cagcaatcgctgagccaatggcatcgcaggcgcaccctgcactgcaaccagtcacgacgc
agcatgaatcggaggaccctccggagacctgggcacagtgagaagggcagggaaaactcc
agttacgcagagatggaaactggcacaggaagtgtaactgatgccccaccggcgccctct
agtgttgtggccaaggcattgcacataatctcagaggtggtggtcgcagtgagggaggaa
gagggcagcagagcagagggccaaggatccccagctccacaactccaggcctcgcctcgg
aaggagaaaccgattacagtagaagagttggacggacatccagcagggagtgaggtggac
tgggagggaggggtcagaccatggaggtgtgttgtagagggtttagagagtgaggaaggg
caagctagtctccatagggtccatgaggaactctgtgccaggtcagtggagctagatgac
cagacagacacacagataggtcagcagaggtcagagtggactgggctgccagtgggagac
tga
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