Oncorhynchus tshawytscha (Chinook salmon): 112265290
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Entry
112265290 CDS
T05605
Name
(RefSeq) alpha-actinin-4 isoform X2
KO
K05699
actinin alpha 1/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04517
IgSF CAM signaling
otw04518
Integrin signaling
otw04519
Cadherin signaling
otw04520
Adherens junction
otw04530
Tight junction
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112265290
04518 Integrin signaling
112265290
04519 Cadherin signaling
112265290
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112265290
04520 Adherens junction
112265290
04530 Tight junction
112265290
09142 Cell motility
04810 Regulation of actin cytoskeleton
112265290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265290
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112265290
04147 Exosome [BR:
otw04147
]
112265290
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112265290
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112265290
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112265290
Exosomal proteins of colorectal cancer cells
112265290
Exosomal proteins of bladder cancer cells
112265290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_8
Uds1
Motif
Other DBs
NCBI-GeneID:
112265290
NCBI-ProteinID:
XP_024298210
LinkDB
All DBs
Position
LG13:complement(57280102..57323082)
Genome browser
AA seq
902 aa
AA seq
DB search
MVDYHASNSQASSGGPAIYMDPREQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGT
QIENIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDYIAGKGVKLVSI
GAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFH
ISWKDGLAFNALIHRHRPELIDYDKLRKDDPLTNLNNAFEVAEKYLDIPKMMDAEDIVGT
LRPDEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLDWI
RRTIPWLENRAPEKTMAEMQQKLEDFRGYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNR
PAFMPSEGRMVSDINGSWHNLEGAEKGYEEWMLNEIRRLERLDHLAEKFRQKATIHESWT
DGKEAMLTQKDYETASLSEVKALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSP
SVNARCQKICEQWDALGSLTQSRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAME
DLQDMFIVHNIEEIQGLITAHEQFKSTLPEANKEREAIQAIQAEVQKIAQYNGIKLSGGN
PYTTITPKTIDNKWDKVEQLVPQRDQALQEELAKQQSNDHLRRKFATQANIVGPWIQTKM
EEIGRISIEMNGTLEDQLVNLREYEQSIIEYKPNIDQLEGDHQLIQEALIFDNKYTAYTM
EHLRVGWEQLLTTIARTINEIENQILTRDAKGISQEQLHEYRTSFNHFDKDHSGGLMAEE
FKACLISLGYDVENNKTGDAEFARIMGIVDPNNSGVVTFQAFIDFMSRETTDTDTADQVI
ASFKILAADKNFIMAEELRRELPPDQAEYCIARMAPYSGPDAKPGALDYMSFSTALYGES
DL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatcacgcttctaatagtcaagcatcgtctggaggtccagccatttacatg
gacccaagagaacaagaaaatgactgggaccgggacctgctgctggacccggcctgggag
aaacagcagagaaagacgttcacggcctggtgcaactcccacctgaggaaagcaggcacg
cagatcgagaacatcgaggaggacttcagggatggcctcaaactcatgctcctgctggag
gtcatctcaggggaacggttacctaagcccgagagaggcaagatgagggtccacaagatc
aacaacgttaacaaagctctggactacatcgccggcaaaggagttaagctggtgtccatt
ggcgcggaggaaattgtggatggcaacgccaagatgaccctgggcatgatctggacaata
atcctccgtttcgccatccaggacatctctgtggaagagacctctgccaaggagggcctg
ctcttgtggtgccagaggaagaccgcgccctacaaaaacgtcaacgtgcagaacttccac
atcagctggaaggatggccttgccttcaacgctctgatccacagacacaggccagagctc
attgactacgacaagctaaggaaggatgaccccttgaccaacctgaacaatgcctttgag
gtggctgagaagtacctggacatccccaagatgatggacgctgaagacatcgtgggcacg
ctgaggcccgacgagaaggccatcatgacctatgtctcctgcttctatcacgccttctct
ggcgcccagaaggctgagactgcagccaataggatctgcaaggtgctggctgtcaaccag
gagaatgagcacctcatggaggactacgagaagctggccagtgacctgttggactggatc
cgccggaccatcccgtggctggagaaccgggctccagagaagaccatggccgagatgcag
cagaagctggaggacttccggggctaccgccgcgtccacaagccccccaaggtgcaggag
aagtgtcagctggagatcaacttcaacaccctgcagaccaagctgaggctgagcaacagg
ccagccttcatgccctctgaaggacgcatggtgtcggacatcaacgggtcgtggcacaac
ctggagggggcggagaagggctacgaggagtggatgctcaacgagatccgtcgcctggag
agactggaccacctggctgagaagttccgtcagaaagccaccatccacgagtcctggacc
gatggtaaggaggccatgctgacccagaaggactatgagacagccagcctgtcggaggtc
aaggctctgctgaggaaacacgaggcgtttgagtctgacttggctgcccaccaggaccgc
gtggagcagatcgccgccatcgcacaggaactcaatgagctggactactacgactccccc
agtgtgaacgcccgctgtcagaagatctgtgagcagtgggatgccctggggtctctcacc
cagagccgcagggagtctctggagaggacagagaagcagctggagtccattgacgagctg
tacctggagtacgccaagagggcggcacccttcaacaactggatggaaggggccatggag
gacctgcaggacatgttcatcgttcacaacatcgaagagatccagggcctaatcacagcc
catgagcagtttaagtccaccctcccagaggccaacaaggagcgggaggccatccaggcc
attcaggcggaggtgcagaagattgcccagtacaacggcatcaagctgagcgggggcaac
ccctacaccaccatcacacccaagactatcgacaacaagtgggacaaggtggaacagctg
gttccccagcgtgaccaggctctgcaggaggagctggccaagcagcagtccaatgaccac
ctgcgccgcaagtttgccacccaggccaacatcgtcgggccctggatacagaccaaaatg
gaggagattgggcggatatccattgagatgaatggaactctggaggaccagctggtgaac
ctgagagagtatgagcagagcatcatagagtacaagcccaacatcgaccagctggaggga
gaccatcagctcatccaggaggctctcatcttcgacaacaaatacaccgcctacaccatg
gagcatctgcgggtgggctgggagcagctcctcaccaccatcgcccgcaccatcaacgag
atcgagaaccagatcctgacacgtgacgccaagggcatcagccaggagcagctgcatgag
taccgcacttccttcaaccactttgacaaggaccacagcgggggcctgatggctgaggag
ttcaaggcgtgtctgatcagcctgggctacgatgtggagaataacaaaacgggcgatgcg
gagtttgcccgcatcatgggcatagtggaccccaacaacagcggcgtggtcaccttccag
gccttcatagacttcatgtcccgggagaccacggacaccgacacagctgaccaggtcatc
gcctccttcaagatcctggctgcagacaagaacttcattatggctgaggagctgagacgt
gagctgcctccagaccaggcggagtactgcatcgcccgcatggcgccctactcgggcccc
gacgcgaagcccggagccctcgactacatgtccttctccaccgccctctacggggagagt
gacctctaa
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