Oncorhynchus tshawytscha (Chinook salmon): 112265318
Help
Entry
112265318 CDS
T05605
Name
(RefSeq) huntingtin-interacting protein 1-like isoform X1
KO
K04559
huntingtin interacting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265318
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112265318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
BALF1
Motif
Other DBs
NCBI-GeneID:
112265318
NCBI-ProteinID:
XP_024298259
LinkDB
All DBs
Position
LG13:complement(57731600..57779655)
Genome browser
AA seq
1055 aa
AA seq
DB search
MDRVKSSMQQVPNPIPKALIRRTGGANSFELEKENFERGQAVSINKAINTQEVAVKEKHA
RTCILGTHHEKGAHTFWAAVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVIKDSMRNKAD
LSDMSRMWGHLSEGYGKLCSIYLKLLITKMEFHVKNPRFPGNLQMSNRQLDEAGENDVNN
FFQLTVEMLDYLECELNLFLGVFSSLDMSRSVSVTAAGQCRLAPLIQVILDSSHLYDYTV
KLLFKLHSCLPADTLQGHRDRFQEQFKKLKSLFYRSSNLQYFKRLIQIPQLPENPPNFLR
ASALSEHISPVVVIPAESSSPETEHMVDLVTEDLVDTDIPVQPAAVVEPRFDDLFGTSAA
TDPFNFNSQNGMRKDDKDRLIEQLTLEIQALREELESFRLESGRLRQALRGRVDELEAEL
AEQSHLRMQALGEGEFLRAELDDLRRVKEDTEKEQRSLTEIERKAVANEQRYVKLKEKYT
ELVQSHADLLRKNAEVTRQMTVARAVEDEMDSVRREMQEKVKAAKEAAERRRTSNEQEQV
EQLQELQRELISSRAALDTLKSTMASSQQSSEELSSQLSTVESEKVELAESLSKKEEELA
GLGEELERVQSSLSSERESGVKTAEALQNQLNEKESREQALESQLVAARWSALQGTVEEA
ERIVQDSLAQLDDPAHISCTSSADYLASRCQASLDCMDRLHSARDGYLADNTGVSELVRA
VTHLAHLVGDTIVQGSATSHMVPVEQADALSDSVKACGAEALSLLGQMKEQESLATADGA
MLRAALDGILATAEKLRPRGLELQQGELGDLVEQEMAATSAAVESAAARIEDMLNKSRAV
DTGVKMEVNERILASCTDLMQAIKVLVLSSKDLQRDIVESGRGAASMKDFYVKNSRWTEG
LISASKAVGWGATVMVDAADLVVQGKGKYEELMVCSHEIAASTAQLVAASKVKADKDNAN
LGRLKLASKGVTQATAGVVASTKSGKSQIEEKDTMDFSSMTLTQIKRQEMDSQVSVLELE
TKLQKERERLGELRKKHYELAGVAEGWGEEDEGTG
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagtgaagagttccatgcagcaagtaccgaacccaattcccaaagcgctgatt
cgtcggaccggcggtgccaacagtttcgaacttgaaaaggagaactttgaacgcggtcag
gctgtgagcatcaacaaggccatcaacacgcaggaggtcgccgtcaaagagaagcatgcc
aggacctgtatcttggggacccaccatgagaagggcgcccacaccttctgggcggcggtc
aaccggctgccgctctcaagcaatgcggtgctctgctggaagttttgccacgttttccac
aagctgctgcgagacggccatcccaacgtgataaaggactcgatgaggaacaaggcggac
ctcagtgacatgagcagaatgtggggtcacctgagtgaaggctatgggaagttgtgcagc
atctacctcaaactgcttatcaccaagatggagttccacgtcaaaaatccccgtttccct
ggcaaccttcagatgtcaaacaggcagcttgacgaggcgggagaaaacgacgtcaacaac
ttcttccagttgacagtggagatgttggactacctggagtgtgagctcaacctcttcctg
ggtgtgttcagctccctggacatgtcgcggtctgtctcggtgacggcggcgggccagtgt
cgcctggctcccctgatccaggtcatcctggacagcagccacctgtacgactacaccgtc
aagctgctcttcaagctgcactcctgccttcctgctgacacactccagggccacagagac
cgcttccaggagcagttcaagaagctgaagagtctgttctaccgctccagtaacctgcag
tacttcaagaggctcattcagatcccacagttacctgagaacccacctaacttcctgcgg
gcgtcggcgttgtcggagcacatcagtcccgtggtagtcattccagctgagtcgtcctcc
cccgagacggaacacatggtggacctggtgacagaggacctggtggataccgacatcccc
gtccagccggctgctgtggtagaacccaggttcgacgacctctttggcacgtccgccgcc
acggacccattcaatttcaacagtcagaacgggatgcgcaaggacgacaaggaccgcctg
atcgagcagctgacactggagatccaggccctcagggaggaactggagtccttcagattg
gagagtgggcgtctgcgccaggcgctgcgggggcgtgtcgatgagctggaggctgagcta
gcagagcagagccacctgaggatgcaggcgttgggagagggcgagttcctgcgggcggag
cttgacgacctgcgccgggtcaaagaggacacggagaaagagcagcgaagcctcaccgag
atcgagagaaaagcggtggccaacgagcagcgctacgtcaagctgaaggagaagtacaca
gagctggtgcagagtcacgctgacctgctgaggaagaatgcggaggtgactcgtcagatg
acggtggcgcgggcggttgaggacgagatggacagcgtgaggagagagatgcaggagaag
gtcaaggctgccaaggaggccgcggagagacggaggacttcaaatgagcaggaacaggtg
gagcagctgcaggagctgcagagagagctgatctccagcagggcggcgctagacaccctg
aaaagcaccatggcctcatctcaacagtcgagtgaggagctcagttctcagctctcgact
gtggaatcggagaaggtggagctggcggaatccttgtcgaagaaagaggaggagcttgca
ggcctgggggaggagcttgagcgtgttcaaagcagcctgtccagtgagagggagagcggc
gtgaagactgccgaggccctacagaaccaactcaatgagaaggagagcagggagcaggcc
ctggagagccagctggtggcagcacgctggtccgccctacaggggactgtggaggaggca
gagaggatagtccaggactcactggcccagcttgacgacccagcacacatcagctgcacc
agctctgcagactacctggcgtccaggtgtcaggcctctctggactgtatggacagactt
cactctgccagagacggctacctggcagacaacacaggtgtgtcggagctggtgcgggca
gtgacccatcttgcccacctggtgggtgacaccattgttcagggcagtgccacctctcat
atggtgccagtggagcaagcggacgcgttgtcagacagtgtgaaggcgtgtggggccgag
gccctgtccctgctgggtcagatgaaggagcaggaaagcctggcaacggcagatggcgcc
atgctgagggcagcactggatggcatcctggccaccgcagagaaactgcgtcctcggggt
ctggagctgcagcagggggagctgggagatctggtggagcaggaaatggccgccacatcg
gccgccgtggagtcagcagctgccaggatagaggacatgctcaacaagtcgcgtgctgtc
gacacaggggtgaagatggaggtcaacgagaggatcctggcctcctgtacagacctgatg
caggccatcaaagtgctcgtgctgtcttccaaagatctgcaaagggacattgtggagagt
ggcagaggggcagcatccatgaaggatttctatgtcaagaactctcgctggactgaaggc
ctgatctcagcctccaaagccgtgggctggggcgccacagtcatggtagatgcagcagac
ctggtggtgcagggcaagggcaagtacgaagagctgatggtgtgttcacatgagatcgca
gccagcactgcacagctggtggccgcatccaaggtgaaggcagacaaagataatgccaac
ctgggccgcctgaagctggcatccaaaggggtcacacaggccaccgccggggttgtagcc
tccaccaagtccgggaagtcccagatcgaggagaaagacaccatggatttctccagtatg
accctcactcagatcaagaggcaggagatggactcacaggtttctgttctagagctggag
acaaagctgcagaaggagcgagagcgtctaggggagctaaggaagaagcactacgagctg
gccggggtggccgagggctggggggaggaggacgaaggtacaggttga
DBGET
integrated database retrieval system
