Oncorhynchus tshawytscha (Chinook salmon): 112265384
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Entry
112265384 CDS
T05605
Name
(RefSeq) arf-GAP domain and FG repeat-containing protein 1 isoform X1
KO
K15044
Arf-GAP domain and FG repeats-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112265384
04131 Membrane trafficking [BR:
otw04131
]
112265384
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112265384
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112265384
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
INTAP
Motif
Other DBs
NCBI-GeneID:
112265384
NCBI-ProteinID:
XP_024298394
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All DBs
Position
LG13:complement(58590839..58631064)
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AA seq
549 aa
AA seq
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MAASAKRKQEEKHLKMLREMTSLPPNRKCFDCDQRGPTYANMTVGSFVCTSCSGILRGLN
PPHRVKSISMTTFTQQEIEFLQKHGNESCKQIWLGLYDDRTASIPDFREPQKVKEFLQEK
YEKKRWFVPPEQAKVVASVHASISGSSASSTSSTPEVRPLKTLLGESAPTLHLNKHTPSQ
SPVGSRAAQALQLSQQQQFHDKKFDLLSDLGGDIFAAPSHSQTAAGLSANFANFAHFNSH
PAAQNAHADFANFDAFGSAGPSGAFPSAPQAPFQTSHTAFTSLSSSRSVGEFATAGTALP
HPGAGAHRGSVPSGVPGSLPPVASAGLRHPQSQLTGTSAADRYAALAELDNVFGSSAPAT
SVYNTISTSQGGMFGTVTGVSSAQAQQCMSSMPQGFGGPSTNPFAAAAVAPVIATTNPFQ
NNGRAAAMAAAGLLGALHGQGYPPAHFATFGTGSMSMPAGFRNAATYNLPTSFSGTFQQP
FPGQGPFPQSPACPQQPNGGGFSAYGQAKAVATPFGQAMAAPGVSSNPFLAGAPSGHYPS
GSSSTNPFL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagtgcgaaaagaaagcaggaggagaaacacctgaagatgctgagagaaatg
acgagtttgcctcccaacagaaagtgctttgactgcgatcagcgcggcccaacctatgcc
aacatgaccgtggggtctttcgtctgcacctcctgctctggcatactacgagggctgaac
ccaccccacagagtgaagtccatctccatgacgaccttcacgcaacaggaaatcgagttc
ctccagaaacacggcaatgagtcatgcaaacagatatggctggggctttacgacgacaga
acggcctccataccggacttcagagaaccccagaaagtcaaggagttccttcaggagaaa
tacgagaagaagagatggtttgttcccccggagcaggccaaagtggtggcttcggtccat
gcctcaatctcaggctcgtcagccagcagcaccagcagcactcccgaagtccgacccctc
aaaacactgctgggggagtccgcccccaccctgcacctcaacaagcacacacccagtcag
tctccggtggggagccgtgcggcccaggccctccagctgagccagcagcagcagttccac
gacaagaagtttgacctcctcagcgacctgggcggagacattttcgccgctccgtcccac
tcgcagaccgcagcaggcttgtcagccaactttgccaactttgcacatttcaacagccac
ccagctgctcagaacgcacatgcagactttgctaactttgatgcgtttgggagcgcgggt
ccatcgggtgctttcccctctgcaccccaagcccccttccagacctcacatacagcgttc
acgtccctctcatccagccgcagtgtgggtgagtttgccaccgctggcactgctctccct
cacccaggtgcaggtgctcacagaggtagtgtccctagcggggttccaggctctctcccc
ccggtggcgtcggcaggactgcgtcacccccaaagtcagctgacgggtacatcggcggca
gaccgctacgccgcgctggccgagctggacaacgtgttcggctcgtcagcccccgccacc
agcgtctacaacaccatcagcacttctcaaggggggatgtttggcactgtgacaggagtc
tcgtcagcccaagcacaacaatgtatgtccagcatgccccagggttttggaggtccgtca
acaaacccctttgctgctgcagcggttgccccggtgatagccaccaccaaccccttccag
aacaacgggagagcagcggctatggcagcagcaggcctgttgggggctctgcatgggcag
ggttaccctccagcccactttgccacgtttggcacagggtccatgagcatgccagccgga
ttcaggaacgctgctacctacaacctccccaccagcttcagtgggaccttccaacagccc
ttcccaggccagggccccttcccccagtctccggcctgtccccagcaacccaacggaggg
gggttttcagcctatggacaggccaaggctgtggcgaccccctttgggcaggcgatggct
gcacccggggtctctagtaaccccttcttggcgggcgccccttcaggacactatccctca
ggaagctcttcaacgaatcctttcttatag
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integrated database retrieval system
