Oncorhynchus tshawytscha (Chinook salmon): 112265391
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Entry
112265391 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: amyloid-beta A4 precursor protein-binding family A member 1
KO
K20055
amyloid beta A4 precursor protein-binding family A member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265391
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
112265391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
NRho
Motif
Other DBs
NCBI-GeneID:
112265391
NCBI-ProteinID:
XP_042180066
LinkDB
All DBs
Position
LG01:7071625..7092089
Genome browser
AA seq
971 aa
AA seq
DB search
MRKGERGDREDGKVYSLRNCDTPEDRTISVCVSESPQRAPYRGSGGGRDWICDAPQRAHK
EVKRQGRGGGRGGRSERGGGKSGREGGRVGRETDREEDTGQIVSEIKVCMSSSSSSETQD
CREAAIRPRPPRPRPRPRSGPSSSTPQPHQTQSHTQTRPKQAYQTHTYLTECHTGPTKAH
PAQNHHLEAQSDARQSQQTKTQDCRDGAISSIPRSDFITPHPYPPQTPAQTEHSQAQQTH
TQPPQICPKQAHPAKTHTHPTQAQTQARQVLPTQAQNHKRQAPTHPTQAQTLQHHREGSV
RPTFDCPPTHQTQIQQTQHRRESLTTEPTHSQESQAQTQQSEAQTQAWQIQDRRGSPITS
DPPPAHQTQAQNHPQQQEAWQTMQHRRESLTSPRPDSDSPPSKAQNDQFQSQQHYRESLP
RSRPTSASPPSHKTQIQDHTPHTRQTPQHRRESTTSPRPPSDSPPLQESHQAHIQAHSFQ
TENQGRQTQQHCRENTTSPIPRPTSNSTPSLESHPRAVNVSPASHQNTEPQRESPEERQT
RTQTQMPHDVSEQQPGRPQCPEPRALQKDSNNTPQPEPTQNNASFPSFVDVPGPCEPEDL
IDGIIFAANYLGSTQLLSDKNPSKGTRMAQAQEAVSQVKSQDEDSQMVTEVDLFISTKAV
KVLNADTQETLMDSALRSISYIADIGSIVVLMARTRMAGTSSQDCTEADLSSSEGQRHYR
MICYVFESEDAQLIAQSIGQAFSVAYREFLRANGINPKDLSQKQYSDIINSQEMYNDDLV
HFSNSDNCKELELEKQKGESLGVVIVESGWGSILPTXILANMLNSGPAARSGKLNVGDQI
MSINNTSLVGLPLATCQGIIKGLKSQVQVKLSIVSCPPVTTVLIKRPDLKFQLGFSVQNG
IICSLMRGGIAERGGVRVGHRIIEINGQSVVAMPHEKIVQTLSVSVGEINMKTMPAVMFR
LLTGQETPVYI
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagggagagaggggtgacagggaagatggtaaggtctactctttgagaaactgt
gacacccctgaggacagaacgatctcagtgtgtgtctcagagtccccacaaagggccccc
tataggggaagtggagggggaagggattggatttgtgatgcccctcaaagggcccataag
gaggtgaagaggcaggggaggggaggaggacgaggtgggaggagcgagaggggaggagga
aagagtgggagggaaggaggaagggtcgggagggagactgacagggaggaagacaccgga
cagatagtatctgagattaaggtatgtatgagcagtagcagcagctcagagacacaggac
tgcagagaggctgctatcaggcccagaccaccaaggccaaggcccaggcctagatccggg
cccagttccagcaccccacaacctcaccagacacaatcccacacccagacccgcccaaaa
caggcctaccagacccacacctacctgacagagtgccatactggaccgacaaaagcccac
ccagcacagaaccaccacctagaggctcagagcgacgcccgacagagccagcagactaag
acacaggactgcagagacggtgccatcagttctatacctagatctgacttcatcacacca
cacccttaccctcctcaaaccccggcccaaacggagcacagccaggcccagcagacacac
acccagcctccccagatctgcccaaaacaggcccatccggcaaagactcacacccacccg
acacaggcccagacccaggcccgacaggtcctgccgacacaggcccaaaaccacaagaga
caagcacccacccatccgacacaggcccagacactgcagcaccacagagaaggttccgtc
aggcccacctttgactgccctcccactcaccagacccagatccagcagactcagcatcgc
agagagagtctcaccactgagcctacacacagccaggagagccaggcccagacccagcag
tcagaggcccagacccaagcctggcaaattcaggatcggagagggagtcccatcacttct
gacccccctcccgcccaccagacccaggcccagaaccatcctcagcagcaagaggcctgg
cagaccatgcaacaccgtagagagagccttaccagccccaggcccgactctgactcccca
cccagtaaagcccaaaatgaccagtttcagtcccagcagcactacagagagagtctcccc
aggtcccggcccacttctgcctcccctcccagccacaagactcaaatacaggaccacact
ccccacacccgacagacacctcagcatcgcagagagagcaccaccagtcccaggcccccc
tctgactcccctcccctccaggagagccaccaggcccacatccaggcccactcttttcag
accgagaaccagggcagacagacccagcagcattgcagagagaacaccaccagccccatc
ccaaggcctacttctaactccactcctagcctggagagccatccaagggctgtcaatgta
tcaccagcttcacatcagaacacagagccacagagggagtccccagaggagagacagaca
aggacacagacacagatgcctcacgatgtctcagagcagcagcctggcaggccccagtgc
ccagagccccgggccctacagaaggacagcaacaacacacctcagcctgaaccaacacag
aacaacgcctcgttccccagcttcgtggatgtcccaggtccgtgtgagccggaggacctg
atagatgggatcatctttgctgctaactaccttggttccacacagctgctgtctgacaag
aacccatctaaaggaacacgcatggcccaggcgcaggaggctgtcagccaggtcaagagc
caagatgaagactctcagatggtgacagaagttgacctcttcatctccaccaaagcagtc
aaagtgctgaatgctgacacacaggagacgctgatggacagtgcgttgcgttccatatcc
tacatcgcagacatcgggagcatcgtggttctgatggctcgtacccgtatggcaggaaca
tcctcacaggactgtactgaagctgatctctcctcctcagagggacagagacactacaga
atgatctgctatgtctttgagtcagaagacgcccagctcattgcccagtccatcggacag
gcattcagcgttgcctacagggagttcctccgagccaatgggatcaatcctaaggacctg
agtcagaagcaatacagtgacatcatcaattcccaggaaatgtacaatgacgacctggtc
catttctcaaactctgacaactgtaaagagctggagttggagaagcagaagggtgagagc
ctaggtgtggtgatagtggagtctggctggggctccatcctgcctacgnngatcctagct
aacatgttgaacagcggcccagctgcccgctctgggaagctcaacgtgggagaccagatc
atgtccatcaacaacactagcctggtagggctaccactagctacctgccagggtatcatc
aagggtctgaagagccaggttcaggtgaagctgagcatcgtgagttgtcctcctgtcacc
actgtcctcatcaagagacccgacctcaagttccagctgggcttcagtgttcagaacggc
atcatctgcagtctgatgcgcggcggtatcgcagagcgaggaggggtgcgagtcggccac
aggatcattgagatcaatgggcagagtgttgttgccatgccgcatgagaaaatagtccag
accctgtctgtatcagtgggagagatcaacatgaagaccatgcctgcagtgatgttcaga
ctgttaacaggacaggagactcctgtttacatctag
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integrated database retrieval system
