Oncorhynchus tshawytscha (Chinook salmon): 112265398
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Entry
112265398 CDS
T05605
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 8 isoform X1
KO
K08623
a disintegrin and metalloproteinase with thrombospondin motifs 8 [EC:3.4.24.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112265398
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
112265398
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GFIT
Motif
Pfam:
ADAMTS_spacer1
ADAMTS_CR_2
TSP1_ADAMTS
Reprolysin
TSP_1
Reprolysin_5
Reprolysin_3
Adt-1
TSP1_spondin
Pep_M12B_propep
ADAMTS_CR_3
TSP1_CCN
Reprolysin_2
Reprolysin_4
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
112265398
NCBI-ProteinID:
XP_024298428
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All DBs
Position
LG13:59561135..59573836
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AA seq
951 aa
AA seq
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MCSKRCFVLLVLCVIDKSLSKLFESEEIVPVRINGRSSGRFWKRSEELPRFRLSAFGRDF
TLNLSPDNSFLSPTLTIQRIKAKDIHALRSASGAQGRHSETETDFHNLINKTEQIERDLR
SCFYSGTVDSNQDSVVAVSICYGILGSFVTDGDEYLIEPKVLGTGKRERSTEQLHFIKRR
TPTEAPNHTKTVFDQLREESNVKADNERFLHEKKDPERQLRGKRFVSAPRFIETLVVADT
SMTHFYGDEIKHYILTLVSVAAQLYKHPSIKNPVHMVVVKMVVVEDEEVGPSLSNNGGVA
LRNFCAWQQQFNPASQRHPEHYDTALLFTREDICGHQSCDTLGVADVGTMCDPKRSCSVI
EDNGLQAAFTAAHELGHVLSMPHDDSKNCERMFGNLGGHHMMAPLFVHLNKTFPWSPCSA
LYVTEFFDNGHGDCLLDPPESILPLPSVLPGTTYGLDRQCQQMFGEEFVHCPNTSDSDVC
SQLWCREEGKPHCTTRNGSLHWADGTTCATNKSCLHGACMAAHEVTQPKVAVDGGWGAWG
PWQQCSRTCGGGVEFSYRQCTDPVPQNGGKYCEGQRVQYQSCNTQACEDNDAKSFREEQC
EKYNTFNYLDILGNMKQWIPKYAGVSPRDRCKLFCRAKGSSEFKVFEAKVVDGTTCGPDT
TSVCVQGQCVKAGCDKEIGSNKRLDKCGLCGGDGLSCRKITGSYNKAIYGYSDIVTIPVG
ATNIDIKQRSHRNIKHDGNYLAVKRESGGFILNGNFSVSTVEQDIPVLGAVLKYSGSSTT
LERIQSFRQLREAITIQLLATAGEASPPKVKYTFFIPKDVSFTKSKERKASLHMIQAFGV
PQWRLGEWSECSKSCGSGWSRRNVECRDNAGFHSNTCDKDLKPTDIRPCADLPCPIWQMG
PWSSCSQTCGQGERRRSVVCIDYTGKTVESEKCDTNKQPAPVSGECVYQMC
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcaaaacggtgtttcgttttactagttctgtgcgtaatagacaaatcactttcg
aaattgtttgaatccgaggaaattgtacctgtccggataaatggaagaagcagcggtcgt
ttttggaaacgaagtgaagaactgccgaggtttagactcagtgcctttggccgcgatttc
actttgaatttaagcccggataacagtttcttatctcctacactgacaattcaacgcatc
aaagctaaagatatccacgctttacgcagcgcctcaggtgcccaggggagacactctgaa
actgaaactgactttcacaacttgataaacaagactgagcagatcgaaagagatttgaga
agctgtttttactcggggactgtggactccaaccaagattctgttgttgcggtcagtatc
tgttatggcatccttggatcgtttgttacagacggggatgagtatttaattgagcccaaa
gtgctcggcacagggaaaagggagaggtccactgaacagttacattttatcaaaagaagg
acgcccacagaagcaccaaatcacactaaaactgtctttgatcaactgagggaggagagt
aatgtaaaagcagacaacgaacgttttctgcatgagaaaaaagatcctgagagacaatta
cgagggaaacgctttgtatcagcaccacgatttattgagacgctggtggttgcagacacg
tcgatgacacatttctatggggatgagataaagcactatatcctgaccttggtctctgtg
gcagcccagctttacaaacatcccagtatcaagaaccctgtccacatggtggtggtgaaa
atggtggtggtggaagacgaggaggttggaccgtcactctccaataacgggggagtcgct
ctgcgtaatttctgtgcctggcaacaacagttcaacccggccagccagaggcatcctgag
cactacgacactgctctgctttttacccgagaggatatttgtggacatcagagttgtgac
accctaggagttgctgatgtgggaaccatgtgcgatccaaaaaggagttgctctgtcatt
gaggacaatggacttcaagcagccttcactgctgcccatgaacttggccatgtgctgagt
atgcctcacgacgactccaagaattgcgagaggatgtttgggaatctaggcggccatcac
atgatggcccctctgttcgttcacctcaacaagactttcccttggtccccttgcagcgct
ctctacgtcacggagttctttgacaacggacacggcgactgcctcttggatccaccggag
agcatcttaccgttacccagtgtacttccaggcaccacatacggcctcgaccgccagtgc
cagcagatgtttggggaggagtttgtgcactgccccaacacctctgacagtgacgtctgc
agccagctgtggtgccgggaggagggcaagccccactgcaccaccagaaacggcagcctc
cactgggcggatggcaccacgtgcgccaccaacaagagctgtctgcacggtgcatgcatg
gcagcccacgaggtcacacagccaaaggtggctgtggatggtggctggggcgcttggggg
ccatggcaacagtgctccaggacatgtggggggggtgtggagttctcctacaggcagtgc
acagatcccgtgccccagaacggcggaaaatactgcgagggccagagagttcagtaccag
tcttgcaacacccaggcgtgtgaggataatgatgcgaagagttttagagaggagcagtgt
gagaagtacaacaccttcaactatctggacattctggggaacatgaagcaatggattcca
aagtacgctggtgtgtcgccccgggacaggtgtaaactcttctgccgggccaaaggcagc
agtgaattcaaagtctttgaagccaaggttgtcgacggcaccacatgtggtcccgacact
acgtctgtctgtgtacaaggccaatgtgtcaaggcgggctgtgacaaagagatcggctcc
aacaagaggcttgacaagtgtggcttgtgtggtggggatggcctcagttgcaggaagatc
actggttcatacaacaaagccatttacggctacagcgacattgtgaccattcctgtcgga
gctaccaatattgacatcaaacagcgtagccataggaacatcaaacacgatggaaactac
ctggcggtcaagcgagagagtggtggcttcatactgaatggtaacttctctgtgtccacg
gtggagcaggatatccctgttctcggggctgtgctgaagtacagtggctcgtccaccacc
ttggagagaatccagagcttcagacaactgagggaggccatcaccatccagttgctggcc
actgctggggaggcatctccacccaaggtcaaatacacattctttatccccaaagatgtg
tctttcactaaatccaaagagagaaaggcttcgctgcatatgatccaggctttcggtgtg
ccccagtggcgtttgggcgaatggtcagagtgctccaagagttgcggctctgggtggtcc
cgaaggaacgtcgaatgcagagacaacgctggtttccattccaatacctgcgataaggac
ctgaaacccacagatatcagaccctgtgctgatctgccgtgccccatctggcaaatgggg
ccttggtcgtcctgttcacaaacttgtggccagggggaacgccgacgcagtgttgtctgt
atagactacacaggcaagactgtcgagtcagagaagtgcgacaccaataagcaacccgcg
ccagtgtcgggagagtgtgtttaccaaatgtgctag
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