Oncorhynchus tshawytscha (Chinook salmon): 112265425
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Entry
112265425 CDS
T05605
Name
(RefSeq) spartin isoform X1
KO
K19366
spartin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112265425
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Gene cluster
GFIT
Motif
Pfam:
Senescence
MIT
Motif
Other DBs
NCBI-GeneID:
112265425
NCBI-ProteinID:
XP_024298474
UniProt:
A0A8C8IFE8
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Position
LG13:60992436..61009965
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AA seq
617 aa
AA seq
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MEEANQDAFDRARLQVIKDGYEKAFECINRGLTEDEAGHKAQALAQYTQGRQHLIRAISV
PSQGHECVGCSWESARQMQHKMQETLNNITTRLAVLETSPDPEFPPPLDASNGVPGTASN
SNLYPKLEKEKPERPSPPKLLMTNRQGGAVGGSVFPSLPLSPTRQSVVPGELPPAYSSQA
ADGHLTISYGTESGEMSLVGEEFYSHMSPSPPSPHSLGEDGEELFFLPHGVQIFFVTPDG
QVSAPSYPGYLRMVKFTSQQSERVPNRPPAFLQVCDWLYPLMATDSPVLLCNTGVFMFPD
MMASAPGSYVGVVLSSELPIEDRQLFQDLLSQMTDLRVQAPNEAADSINLSQKVSIAPLE
EEEVPAAAEEEEKNLPEWSEKVASGILTGASWLSWGLVKGAEFTGIAIQKGASKLREHIT
PEDKPAHISPSVSKGLHVAKQATGGAVRVSQFLVDGVCMVAGCVGKELAPHVKKHGGKLV
PESMKKDKDGRSNIDGAMVVAASGVQGFATMWTGLEVAAKNITVSVASETVNTVKHNPPP
LNSWLCVIIRYGAAAGQATDHAVNSAINMGVTAFNIDNLGIKAVVKKTGKQTAVAILEDY
QLRDPNTNQKQVEKRDK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagccaatcaagatgcctttgacagagccaggctgcaggtgattaaagacggc
tatgagaaggcctttgagtgcatcaacaggggcctgaccgaggatgaagctggccacaag
gcccaggccctggcccagtacacacagggacgccagcacctcatcagggccatcagtgtg
ccctcacaggggcatgagtgtgtggggtgctcctgggagtcagcccgccagatgcagcac
aagatgcaggagactctgaacaacatcaccactcgattggcggtcctagagaccagccca
gaccctgagttcccaccacctctagatgcctctaatggagtcccagggacagcctctaac
tcaaacctctaccccaaactggagaaggagaaaccagagcggccgtctccacccaagctg
ctgatgactaaccgccaaggtggagctgtgggaggcagtgtgtttccctccttgcctctt
tctcccactagacagtctgtggtgcctggcgagctgcccccagcctactcttcccaggcg
gctgacggccacctgactatctcctacgggacagagtctggagaaatgtcgctggtggga
gaggagttctacagccacatgtccccctctcccccctctcctcatagcctgggggaggat
ggagaggaactcttcttcctgcctcacggggtacagatattctttgtcacacctgacggc
caggtcagcgctccctcctacccagggtacctgcggatggtcaagttcaccagccagcag
tcagagagagtgcccaaccggcccccagccttcctgcaggtgtgtgattggctgtaccca
ctgatggccactgactcccccgtcctgctgtgtaacacaggggtgttcatgttccccgac
atgatggcgtccgccccggggtcctacgtgggcgttgtgctgtcctctgaactgcctata
gaagacagacagctgttccaggacctgctgtcccagatgacagacctcagggtgcaggct
ccaaatgaggcagcagacagcatcaacctgagccagaaggtgtccatcgctcccctcgag
gaagaggaggtcccagcagctgcagaggaggaggagaagaacctgccagagtggagcgag
aaagtggccagcggcatcctcacaggggcatcgtggctgagctggggcctggtgaagggg
gctgagttcactggcatagccatccagaagggggcgtccaaactgcgggagcacatcacc
ccagaggacaagccagcccacatcagcccctctgtctccaagggactgcatgtagccaaa
caggccaccgggggcgctgtccgcgtcagccagttccttgtggacggtgtgtgtatggtg
gcagggtgtgtgggtaaggagctggctccccacgtgaagaaacatggaggcaagttggtc
ccggagtccatgaagaaagacaaagatggacgatccaacattgatggagccatggtggtg
gctgccagcggagttcaaggcttcgctaccatgtggactggcttggaagtagcagcaaag
aacatcaccgtctctgttgcctccgaaaccgtcaacactgtcaagcataaccctccccct
ctcaacagttggttgtgtgtgattataaggtatggggctgcagccggccaggccacagac
catgctgtgaactcagccattaacatgggcgtcaccgccttcaacattgacaacctgggc
attaaagctgtggtgaagaagactggcaaacagacggccgtggccatcctggaggactac
cagctacgggaccctaatactaaccagaaacaagtagagaaacgggacaaatag
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