Oncorhynchus tshawytscha (Chinook salmon): 112265433
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Entry
112265433 CDS
T05605
Name
(RefSeq) stAR-related lipid transfer protein 13 isoform X1
KO
K20632
deleted in liver cancer protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265433
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112265433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
SAM_2
Tra1_central
Motif
Other DBs
NCBI-GeneID:
112265433
NCBI-ProteinID:
XP_024298488
LinkDB
All DBs
Position
LG13:complement(61379382..61474046)
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AA seq
1684 aa
AA seq
DB search
MDTVLMVTLEERQSLVMSASSGRTFSPQTLAHTQVQTQAQQQTQPETQTHQSSSECASES
SHDDDSSTERGEDGCLTGPLSSDYNRTGAPGIEGKIAVSTGGPAGPVESGSDVSPPDPLD
PLQIVCPGGLLSEPGSVTSPSPDDANNNGLDLHSTSPAEDPCLASNVPSPRIEGDVDVLA
PKIEGNLEVEDSDRPVESGHFLDANLSGQLEDMELGHTSPSQTESDMELEEKSPRWTETD
SQPEDHSEGPMDNGHVPTDLEHTEDNHVPFPLGHIHTLLVQSEAEVSHVTISVVQSETFS
SIPSLVVSVDNNMDPFRPPSLPIALSEAPLAGLGLCDHPRIIKHKPSSITFSDYTCSSST
CHSSTDHSVFINDSSDCRESSSEEDDEGDVDEDGDDDDIFPELLQSREFLVSRRRRSSNR
DKVVQKRSSLNPQAEAPVSSTTNTSASSHLSSSSSSKNQNHGGYEAETETSSTEESALVQ
PQTLWCESMSQLMRKLDQLNLDIEEALSASSSPSDTPCTARRQQCGAVSGTAVNQSLNEK
DSTLLQRGEPDTGECPRQDQHNTTAPHISAIGTRARTKKTVMCSKMTNAGAELEAKEACD
WLRAAGFPQYAQLFEDSQFPIDISPVKKDHDFLDNDLVEPLCRRLNTLNKCASMKLDVNL
PKKKSEDSDEEDLFAISDRWTFEWTSRRWSRLKGEGHSPREGEGQGLQTTTSSESVLTDL
SEPEVSSLHSESSGGSGHQAVSTEDSDSSNRNYYDSAAMPEPDSTSLTLPHLPKHLPYYG
SLPAKNGRAGRTRAKDFLHRMETLRSRGTLGRGHCKKLVISAPVLQTEPEALKTLRCVEI
TNGDRSGAEVTTGGPILGLTPQCPSSSEGSHSSGSTVSSPSLKERKPHSQRTDRSDAKRS
GMYLEDLAMFSSLQRIGGVAQGKRGVAEHNQRNEFRSYENLVVHIPKDHKPGTFPKALSI
ESLSPILGPSVPRHSDHVNPLEPQSNPHPTYNPREFYHRPLTQFCPRGSRISVYDNVPGS
HLYASTGDLLDLEKEDLFPHLDDILQHVNGLQQIVDRWSKNILPSAGLDGQGIQPAGLKS
SSQITLDFEGTSVLEGQSTSSDGDRDAVSLNETHCTGHRERRDSGVGASLTRPNRLRWPS
FQMSNRLSHSVASLQITNQSAGQLSLLQKFSLLRLTAIMEKYSMSNKHGWTWSVPKFMKR
MKVPDYKDKNVFGVPLIVHVQRSGQPLPLSLQQALRYLRSQCLDQVGLFRKSGVKSRIQA
LRQMNESSPDDVSYEDQSAYDVADMVKQFFRDLPEPLLTSKLGETFLHIYQYVPKDQRLQ
AVQTAIMLMSDENREVLQMLLCFLSDVTSSVEENQMTPMNIAVCLAPSLFHLNILKKDNL
SPRAMQRKYTTGRPDQKDLNENLAATQGLAHMIIECNRLFEIPHEMVTQSRNSYVEADLH
APTLEELCRQQEEDDASYQTEARPCQTHSESRPQNLYQSYVESRLQELLKEAREKAKGWV
SCTSSDNTELYCKKVGDGNPLRQWRVAVEVEAPPSVLLNRVLRERHLWDVDLLQWKVAET
LDRHTEVFHYVLNRMPPHPSRDFLVLRSWRTDLPKGTCALVCVSVEHEDCPRVGGVRAVV
LESNYLLEPCGSGKSRLTHICRVDLKGRSPEWYNKAFGHLCAAEAARIRNSFQPISTEGP
ETKI
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggacacagttctgatggttactctggaggagcgacagtctctggtcatgtcagcatca
tctggtaggaccttctcaccacagacactggcacatacacaggtacagacacaggcacag
caacagacacaaccagagacacagacacaccagtcctcctcagaatgtgcttcagagtct
tctcatgatgacgacagctccacagagagaggtgaggatggttgtttgactggaccacta
agcagtgactataacaggactggagctcctgggatagagggaaaaatagctgttagtact
ggagggccagcaggaccagtagagtctggttctgatgtctcccctcctgaccctctagac
cctctccagatcgtctgtcccgggggtctcctcagtgagccaggcagtgtgacatcacca
tcgcctgatgatgccaataacaatggattggatttacacagtacttctccagctgaggac
ccctgccttgcctccaatgttccttctcctaggatagagggagatgtggatgttcttgct
cctaagatagagggaaatctggaggttgaggacagtgacagacctgtagaatcagggcat
ttcctggatgctaacctctctggtcagctagaggacatggagctggggcatacctcgccc
agccagacagagagcgacatggagctagaggagaagtcacccagatggacagaaacagac
agccagcctgaggaccactcagaggggcctatggataacggacatgtccctactgatctg
gaacacacagaagacaaccatgtgcccttccctctaggacatatccatacccttctggtc
caatcagaggcagaggtcagccatgtcactatctctgtggtccaatcagagacttttagc
tccatcccttctctagtggtcagtgtggacaacaacatggatcccttcagaccaccctcc
ctccccatagccctctctgaggcccccttggcggggctaggcctctgcgatcacccccgc
atcatcaaacacaaacccagctccatcaccttctcagactacacctgtagttcctccacc
tgtcactctagcaccgaccacagtgtcttcatcaatgacagctccgactgcagggagtct
tcctcagaggaggatgatgaaggtgatgttgatgaagatggggatgatgacgacatattc
ccagagctgcttcagagcagggagttcctggtcagtcggaggagaaggagcagcaacaga
gacaaagtagttcagaagagaagttctctgaatccccaggctgaggcaccagtcagctct
acaaccaacacttcagccagctcccacctctcctcctcttcttcctccaaaaaccagaac
cacggcggctacgaggcagagactgagaccagcagcacagaggagtctgccctggtccag
cctcagaccctgtggtgtgagtctatgagccagctgatgaggaaactggaccagctcaac
ctggacatagaggaggctctgagtgcatcatcctccccctcggacacaccctgcaccgca
cgcagacaacagtgtggagctgtgtctgggacggcagtaaaccaatctcttaatgagaag
gacagtacactgctgcagcgaggggaaccagacacaggagaatgtcccagacaggaccaa
cacaataccacggcccctcatatctcagccataggaaccagagccaggaccaagaagaca
gtcatgtgcagtaagatgaccaatgcaggagcagaactcgaggcaaaggaggcgtgtgat
tggctacgagcggcaggattcccccaatacgctcagctctttgaagactctcagttcccc
atcgatatctctcctgtgaagaaagaccatgactttctggacaacgacctggtggagcct
ctctgcaggcgactcaacaccttgaacaagtgtgcctctatgaaactagacgtcaacctc
cctaagaaaaagagtgaagactctgatgaggaggacctgtttgccatcagtgacagatgg
acgtttgagtggacgagccgccgctggtccagactaaagggggaggggcatagtcccagg
gagggtgaggggcagggcctgcagaccaccaccagtagcgagagtgttctaactgacctc
agcgaaccagaggtctcatctctccacagtgagagcagtggggggagtggccaccaggct
gtgagcacagaggactccgacagctctaaccggaattactacgactctgcagcgatgcct
gaacctgactccacctcccttaccctaccacacctccctaagcacctcccctactacggc
tcgctgcccgccaaaaacggccgcgccggaaggacccgagccaaggacttcctgcaccgc
atggagacactacgttcccggggcacactgggtagggggcattgcaagaagctggtgatc
agcgctccggtattgcagacagagccagaggccctgaagacgctgcgctgcgtggagatc
accaatggggacaggtcgggggcagaggtaaccactgggggacctatcctagggctaacc
ccccagtgcccctccagcagcgagggcagccactccagcggcagcactgtctcatccccc
agtctgaaggagaggaagccccactcccagcggacggaccggtccgacgccaagcgcagt
ggcatgtatctggaggacttggccatgttctccagcctgcagcggatcggtggcgtggcc
caggggaagaggggtgtggccgaacacaatcagcgtaacgagttccgctcctacgagaac
ctggtggtccacatccccaaagaccacaagcctggcaccttccccaaggccctgtccata
gagagcctctcccccatcctggggccctctgtcccccgccacagcgaccacgtcaacccc
ctggagccccagtccaacccccaccctacctataacccgagggagttctaccaccgtccg
ctcacccagttctgcccacggggcagtaggatcagtgtgtacgacaacgtccctgggtct
cacctctatgcctctactggagacctgctggacctggagaaggaagacctgttcccccac
ctggatgacatcctgcagcatgtcaacggcctgcagcagatagtggaccgctggtccaag
aacattctgccctctgcaggcctggacggacaggggatccagcctgcaggtctgaagtca
tccagccagatcacgctggactttgaggggacgtctgttctggagggacagagcacatcc
agtgacggggacagagacgccgtgtccctcaatgagactcactgtacaggacatagagag
aggagggactcaggggtgggagcatcactaaccagacccaaccgtctgcgatggcccagc
ttccagatgtccaaccggctcagccactcagtggcctcgctccagatcaccaaccaatca
gcaggtcagctcagcctgctgcagaagttctctctcctccgcctcactgccatcatggag
aaatactccatgtccaacaaacacggatggacctggtcagttccaaagttcatgaagagg
atgaaggttccagactacaaggacaagaatgtgtttggtgttcctctgatcgttcacgtc
cagcgctctggtcagcccctccccctcagtctgcagcaggccctccgatacctcaggagc
cagtgtctagaccaggtgggtctgttccgtaagtctggtgtgaagtctcgtatccaggcg
ctgaggcagatgaatgagtcgtctcctgatgatgtcagctacgaggaccagtcggcgtac
gacgtagcagacatggttaaacagttcttcagagacctgcctgaacctctactgaccagc
aagctgggagagaccttcctacacatctaccagtatgttcctaaggaccagcggttgcag
gctgtgcagacggccatcatgctgatgtcagacgagaacagggaggtgctccagatgctg
ctctgcttcctgtctgatgttacttcctctgtggaggagaaccagatgactcccatgaac
atcgctgtgtgtctggccccgtccctgttccacctcaacatcctgaagaaggacaacctc
tcacccagggccatgcagaggaagtacacaacaggacggcccgaccagaaggacctgaat
gagaaccttgccgcgacgcagggactcgcccacatgatcatcgagtgcaaccgactgttt
gagattccccacgagatggtgactcagtccaggaactcgtacgtggaggcggaccttcac
gctcccaccttagaggagctctgtagacagcaggaggaggacgatgcgtcctaccagaca
gaggccagaccctgccagacacactcagagtccagaccgcagaacctgtaccagagctac
gtagagagcaggctgcaggagctcctgaaggaggccagagagaaggctaagggctgggtg
tcctgcaccagctcagacaacactgagctctactgtaagaaggtgggtgatgggaaccct
ttgcggcagtggcgtgtggcggtggaagtggaggcccctccctcggttttgttgaaccgc
gtgctgcgagagcgccacctgtgggatgtggacctgctacagtggaaggtagctgagact
ctggacagacacactgaggtgttccactatgtcctcaaccgcatgcccccacaccccagc
agagacttcctggtcctacggtcgtggaggactgaccttcccaaggggacgtgcgcattg
gtgtgtgtgtctgtagaacatgaggactgtccccgggtcggtggggtgagggccgtggtt
ctagagtccaactaccttctagaaccctgcggctctgggaagtccagactcactcacatc
tgcagggtggatctcaaggggaggagtccagagtggtacaacaaggcctttggtcacctc
tgtgctgctgaagctgctcgtattcgcaactccttccaaccaatcagcacagaggggcca
gagaccaagatctga
DBGET
integrated database retrieval system
