Oncorhynchus tshawytscha (Chinook salmon): 112265476
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Entry
112265476 CDS
T05605
Name
(RefSeq) claudin-3
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112265476
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112265476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112265476
04147 Exosome [BR:
otw04147
]
112265476
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112265476
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112265476
Exosomal proteins of colorectal cancer cells
112265476
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
DUF2232
SPC25
Motif
Other DBs
NCBI-GeneID:
112265476
NCBI-ProteinID:
XP_024298589
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All DBs
Position
LG13:complement(64412474..64416920)
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AA seq
379 aa
AA seq
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MAVLGLEILGMILAVLGWILSIVSCALPMWRVSAFIGVNIITAQTIWEGIWMTCVVQSTG
QMQCKVYDSMLALSSDLQAARALTVISIVVGIMGVLVAVVGAKCTNCVKDETAKARVMIA
AGVAFIVASLTQLIPVSWSANSIIMEFYSPITPESEQDSLTTTMSAGLELVGIALCVLGW
IIAIVSCTLPMWRVTAFIGNNIVTAQIIWEGLWMTCVVQSTGQMQCKVYDSMLALSQDLQ
AARALTVISILLAILAVLIAIAGAKCTNCIEDEASKAKVMIISGVFFIVSGVMQLIPVSW
SANTIIRDFYNPLLTDAQRRELGAALYIGWGASALMILGGSLLCCSCPPREKRYNPSRMA
YSVSRSTPGGPGFERKDYV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgttgggactagagatcctggggatgatcctggctgtcctgggttggatatta
agcatcgtgtcctgcgccctgcccatgtggagggtgtccgctttcattggggtcaacatc
atcacggctcagaccatctgggagggtatctggatgacctgtgtggtccaaagcacgggc
cagatgcagtgtaaggtatatgactccatgctggccctcagctctgacctgcaggcagcc
cgagccctcacagtcatctccatagttgtgggaatcatgggggtgctggtggccgtggtg
ggggctaagtgtaccaactgtgtgaaggacgagacggccaaggcccgggtgatgatcgca
gcgggggtagccttcatcgtagcatcgttgacgcagctgatcccggtgtcctggtcagcc
aacagcatcatcatggagttctatagtcccatcactcctgagagtgaacaagacagctta
actaccaccatgtctgcagggttggagttagtggggatcgctctatgcgtattaggatgg
atcattgccatcgtgtcctgcaccctgcccatgtggcgagtaacagccttcatcggcaac
aacatcgtcacggctcagatcatctgggagggcctgtggatgacctgtgttgtccagagc
acaggccagatgcagtgtaaggtctatgactccatgctggctctctcccaggacctccag
gccgccagggccctcacggtcatctccatcctcctggccatcctggccgtgctcatcgcc
atcgccggggccaagtgcaccaactgtatcgaggatgaggcatccaaagctaaagtcatg
atcatctctggggtgttcttcatcgtgtcgggagtcatgcagctgataccagtgtcctgg
tcagccaacactatcatccgggacttctacaacccgctgctgactgatgctcagcgcagg
gagttaggggcagcgctctacattggctggggggcttcagccctcatgatcctcggggga
agcctcctctgctgttcctgtccccctcgggagaagaggtacaacccctcacggatggca
tactctgtctcacgctctaccccaggtgggcccgggtttgagagaaaagactatgtgtga
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