Oncorhynchus tshawytscha (Chinook salmon): 112265478
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Entry
112265478 CDS
T05605
Symbol
cldnf
Name
(RefSeq) claudin-like protein ZF-A89
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03272
Virion - Hepatitis viruses
otw04382
Cornified envelope formation
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
112265478 (cldnf)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112265478 (cldnf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112265478 (cldnf)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112265478 (cldnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112265478 (cldnf)
04147 Exosome [BR:
otw04147
]
112265478 (cldnf)
04515 Cell adhesion molecules [BR:
otw04515
]
112265478 (cldnf)
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112265478 (cldnf)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112265478 (cldnf)
Exosomal proteins of colorectal cancer cells
112265478 (cldnf)
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
L1 family
112265478 (cldnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Amastin
SUR7
Colicin_V
MFS_MOT1
DUF3810
TMEM174
DUF973
DUF3185
Fig1
Motif
Other DBs
NCBI-GeneID:
112265478
NCBI-ProteinID:
XP_024298591
LinkDB
All DBs
Position
LG13:64434385..64435702
Genome browser
AA seq
255 aa
AA seq
DB search
MGRIGKEVFGQVLSFIGFVGVAVTTGIPMWRVTTYIGANIVTGQIVWDGLWMNCVMQSTG
QMQCKINDSVMRLATDLQAARALVIISIIFIFVGLIVTFIGGQCTSTLKSESSKSKVTIL
GGILLLIGALLVLIPVCWSAAFTISDFNNPLTIETQRREIGASIYIGWGSTALLLIGGII
LCTSCPPQKMYGYPGYPQGAPMYPYPGQPMVQAGPYGRVYTPASRPYSGTGSYAPSKPYA
APIEYAVPGRPGQYL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggatcggaaaggaggtgtttggccaggtgctcagcttcatcggcttcgtgggg
gtggcagtgaccacgggtatccccatgtggagggtaaccacttacatcggtgccaacatc
gtaacaggacagattgtgtgggacggcctgtggatgaactgcgtgatgcagagcacggga
cagatgcagtgcaagataaatgactcagtgatgaggctagcgacagaccttcaggcagcg
agggccctggtcatcatctccatcatcttcatctttgtcggcctgattgtcaccttcatt
gggggccagtgcaccagcaccctgaagtctgaatcctccaagagtaaagtgacgatcctt
ggtggcatcctgctgctcattggtgctcttctggtcctcatccccgtctgctggtcggca
gcgttcaccatctcagactttaataaccctctgaccatcgagacccagaggagggagata
ggagcctccatctacatcggctggggctccacagcgctgctcctcatcggagggatcatc
ctctgcacctcctgcccgccccagaagatgtatgggtacccaggctatcctcaaggagca
cccatgtacccctatccaggccaaccaatggtccaggcagggccctatgggagagtttac
accccagccagcagaccctactcagggacaggttcgtatgcaccaagcaagccatatgca
gcaccaatagaatacgctgtacctggacggcctggacagtatctgtaa
DBGET
integrated database retrieval system
