Oncorhynchus tshawytscha (Chinook salmon): 112265538
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Entry
112265538 CDS
T05605
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog isoform X1
KO
K15174
RNA polymerase II-associated factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112265538
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
112265538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
112265538
NCBI-ProteinID:
XP_024298680
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All DBs
Position
LG13:66831088..66836337
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AA seq
537 aa
AA seq
DB search
MAPTIQTQAQRDSDGHRSRSSSHRTVPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQHR
FVQYKATSLEKQHKHELLTEPDLGVTIDLINPDTYRVDPSILLDPADEKLLEEDITAPSS
SKRSQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQIA
AIEKTFEDAQKPIAQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDMSAPQG
VEMMSQAMIRGMMDEEGNQFVAYFLPNEETIRKRKRDVDEELDYMPDDLYDYKIAREYNW
NVKNKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAVLVCKHRDMN
DKELEAQDARKAQLENHEPEDEEEDMDLGKLQDSGDEKEKGSESEADNSDSDSDREDEDG
KRSGAENDDEEGAKRRRKASGSGSESGEEEVKLADEVEIFGSDDDSDNDDNEPKNGAARS
SGEEGSGSEEEKESHRERSRSVSPAHSSGSDHSEGGRAQSGSGSEQASDSSDGSDSE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctccaactatacagacacaagcccagcgagactcagacggtcacaggtctaggagt
tcatcacacagaactgttccagagaggtccggcgtggtctgtcgggtaaagtactgcaat
agcctgcctgacatcccatttgatcccaaattcatcacatatccatttgaccagcacagg
tttgtgcagtacaaggctacatcgttagagaagcaacacaaacatgagctgctgactgag
cctgaccttggcgtcaccatcgacctcattaacccagacacctaccgtgtcgaccctagc
attcttcttgatccagctgatgagaagttattggaggaagacatcacagctccatccagc
tcgaaaagatctcagcagcacgccaaggtggtcccgtggatgaggaaaactgagtacatc
tctacagagttcaacagatatggtgtctccaatgagaaagtggaagtcaagattggtgtg
tctgtcaaacagcagttcacagaggaggagatatacaaggatagggacagccagattgct
gctattgaaaagacctttgaggatgcacagaaaccgattgcccagcactacagtaaaccc
agagtcactcctgtggaggtgatgcctgtgttccctgacttcaagatgtggatcaacccg
tgtgctcaggtaatcttcgactctgatcctgcgcctaaagacatgtcagcaccccagggt
gtggagatgatgtcacaggccatgattagaggtatgatggatgaggaaggaaaccagttt
gtggcctacttcctgcccaatgaggaaacgattcgcaagcgcaagagagacgtggatgag
gagctggactacatgcctgatgatctgtatgactataagatagccagggagtacaattgg
aacgtaaagaacaaagccagcaagggctatgaggagaactacttctttatcttcagagac
ggagatggagtctactacaatgagctggagaccagagtgaggctgagtaagaggagagct
aaggctggagcccagtctactacaaacgctgtgctggtgtgtaagcacagagacatgaac
gacaaggagctggaagcacaggatgcgcgtaaggctcagctggagaaccatgaaccagag
gatgaagaagaggacatggacttgggtaaactgcaggactctggtgatgagaaggagaaa
ggcagtgagagtgaggcagacaactctgacagtgactctgacagggaggatgaggatgga
aagcgtagtggagctgagaatgatgacgaggagggagcgaaacggaggaggaaggccagt
ggtagcggcagtgagagtggcgaggaggaggtcaagctggcggatgaggtggagatcttc
ggtagcgatgacgacagtgataacgatgataacgagcccaagaatggagcagcccggagc
agtggggaggagggcagtgggagtgaggaggagaaggagagccatagggagaggagtagg
agcgtgtctccggctcacagtagcggtagtgaccactcagagggtggccgtgcccagagc
gggagtggcagtgagcaggcctcagattccagcgatggcagtgacagtgaataa
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