Oncorhynchus tshawytscha (Chinook salmon): 112265549
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Entry
112265549 CDS
T05605
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03265
Virion - Ebolavirus and Lyssavirus
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
112265549
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112265549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265549
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112265549
04090 CD molecules [BR:
otw04090
]
112265549
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112265549
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112265549
Membrane trafficking [BR:
otw04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
112265549
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
NCAM1/2
112265549
CD molecules [BR:
otw04090
]
Proteins
112265549
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
112265549
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Others
112265549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
112265549
NCBI-ProteinID:
XP_024298705
LinkDB
All DBs
Position
LG13:complement(67166619..67275789)
Genome browser
AA seq
1313 aa
AA seq
DB search
MIHAKDIILAFLLVGSTVCLEVEITPTQGEISVGESKFFLCEVVGVAKEIDWYSPSGERI
EPNKPEITVTRNDESSSTLTLYKAGVDSAGTYKCLATNGDQSAEATVNVKFYQRITFKNA
PSPQEFNEGDNAKIVCDVISSPPPTIIWKHKGAKIQMEKDVRFKILPNNHLQIRGIKKTD
EGSYTCEGRLMARGEIDLKIIRVIVNVLPTIRVWQSEVNATAGVGQSAMLTCAADGYPEP
MVTWARAGVLLESGDKYSFNEDGSEMTIMEVAKLDEGEYTCIAKNKAGESEQELSLRVFV
KPKITFLLNQSTSEMEEQVTLTCEASGDPTPTINWSFGLRTFTEGEQAHLNRIYQASWTR
PEQHKSLDGNVVVRSDARVSSLTLKYAKFTDAGQYLCSARNAIGVDSQPAYLEVRYAPKI
QGSVTVYTWEGNAANISCEVLAHPGDVSMLWLRDGFQLPNANVTKAKVFQSPTASYLEVT
PESENDFGSYNCTASNEMGTESKEFLLIQADVPSAPSLGGVEPFSSSARVEFQEPDATGG
VPVLRYRAEWKTVGRGTWVQKVYEVQGGTLSEVTIIGLKPETNYEVKMLAINGKGEGETS
PALVFKTEPVRYSYTKGEPEPPKLEGTLQTKGNSLKVNWIKQDDGGSPITHYLVRYKPKH
QTDWKPEIRLPSGSEYVVLSGLEWNTEYDVFVVAENQQGKSQPGTLTFRTSPEPAAIPDI
DGESALSTGIMAGILILAFVLLLLAVDVTCYFTNKCGLIMCLCGKPGSGAKGHNLEQGKA
AFIKDESKEPIVEMRTEDECTANHNAGGPTEPNETTPLTEPELAALALDTLSSVATISDT
ANTIYDPAQDSPSSESTALTCSLSAPSTDPLSTPVIDPLPAAAPAPAPTSESNTAPPAPL
ISTSDITATPLLDLLEDSSPRAEDKMSETAVSATDCHKSLKKSPIPIPPRRRNSNRPAPS
PPTPKSPTPTHSTTVAPRKSAPDSPSLAPSTASPIQNTRKAAPSPAPMAFTFPASDTSTD
KPAPTATSTVTPVPGTPTVLGSSTPAPDPDKPDSTTKDTHTPAPNIDPTTTPTSVPNIDP
TTTPTSVPNIDPTTTPTYVPNIDPTTTPTSVPSAPTTAFNADVTAAIVHEDTTKSALVFP
DILIPTPAPTSAPTPAPNAPTAPSFATPAAPTVTITPASTTYDTPTPTLTPHIPITTEPQ
APEIEFELTNGVATKSPSLPPAGSTGFQSSPTPSPAPVPSSSSFQANGDGFGADLQASGP
PALEELDSLAKAAPLNNEKIFGDEKSKVEEVKTAQSEVTTEHNDVTQTSDSKA
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgatccacgcgaaagatatcattttagccttccttctcgtgggctctacagtttgtctg
gaagtggagatcaccccgacccagggagagatcagtgttggagagtccaagttctttctg
tgtgaagttgttggggtagcaaaggagattgactggtattcgccgagcggggagaggata
gagcccaacaaaccagagatcaccgtaacccgaaacgacgagtcctcgtccacactcacg
ctctacaaggccggggtggacagcgctgggacctacaagtgtctggccaccaatggagac
cagtcagcagaagccaccgtcaacgtcaagttctaccaaaggatcaccttcaagaacgcc
ccctccccccaagagttcaatgaaggggacaatgccaaaattgtgtgtgacgtcatcagc
tcccctccccccaccatcatctggaaacacaaaggagctaagattcagatggagaaggat
gtccgctttaagatcctgcccaacaaccacctgcagatccgaggcatcaagaagacagac
gaggggtcgtacacctgcgaaggccgcctcatggcccggggagagatcgacctcaagatc
atcagggtcatcgtcaacgtgctccctaccatccgggtgtggcagtctgaggtgaatgcc
acagcaggcgtgggccagtctgccatgttgacctgtgcagctgatggatacccagagcca
atggtgacctgggcaagggccggtgttcttctggagtcaggagacaagtacagctttaat
gaggacggttcagagatgaccatcatggaggtggccaagctggatgagggagagtacacc
tgcatcgctaagaacaaggctggggagagcgaacaggaactcagcctcagggtgtttgtg
aaacctaagatcaccttcctgctgaaccagagcacgtctgagatggaggagcaggtgact
ctgacctgtgaggcgtcaggggaccccacccccaccatcaactggagcttcggcctacgc
accttcactgagggagaacaggcacatcttaacaggatctatcaggcctcttggactcgg
cccgagcaacacaagagtctggatgggaacgtcgtagtgaggagtgatgctcgtgtgtcc
tccctcacgctgaagtacgccaagttcaccgacgctggccagtacctctgctctgcacgc
aacgccatcggagtggattctcaacccgcctacctggaagtccgctatgcccctaagatc
cagggctcagtgacagtgtatacctgggaggggaatgcagctaacatcagctgtgaggtc
ctggcccaccccggtgacgtgtccatgctgtggctgagggacgggtttcagcttcccaac
gctaacgtcaccaaagccaaggttttccagagccccacagccagctacctggaggtcacc
ccagagtctgagaatgactttgggagctacaactgtactgcttccaatgagatgggcaca
gaatccaaggagtttctcctcattcaggctgatgtcccgtcagccccgtccctcgggggg
gtggagccgttctccagctcagccagggtggagttccaggagcctgacgccaccggggga
gtacccgtcctccggtaccgggctgaatggaagactgtgggcaggggcacctgggtgcag
aaggtctatgaggtccaaggaggaactctgagtgaagttaccatcataggcctgaagcct
gagaccaactatgaggtgaagatgttagccatcaacggcaagggagagggtgaaactagc
cccgctctggtcttcaagacagagcctgtccgttattcttacacaaaaggggaacctgaa
ccgcctaagctggagggaacacttcaaaccaaaggcaactccctcaaagtcaactggatc
aagcaggacgatggaggctcacccatcacacactacctagtccgctataaaccaaagcat
cagaccgactggaagccagagatccggctgcccagtggcagtgagtatgtggttctgagc
ggactggagtggaacacagagtacgatgtgtttgtggtggcagagaaccagcaggggaag
tcccaacctggaaccctgaccttcagaacctctccagaacccgctgccatcccagatata
gacggggagtctgccctctccacgggcatcatggcagggatcctcatcttggccttcgtc
ctgctgctcctggctgtggacgtcacctgctacttcaccaacaagtgtggcctcatcatg
tgtctgtgtggcaagccaggcagcggggccaagggacacaacctagaacagggcaaggct
gcattcataaaggacgagtccaaagagcctatagtggaaatgaggacagaggatgagtgc
acagccaatcacaatgcaggaggacccacagaacccaatgagaccacaccccttacagag
ccagagctggctgccctggctctggacaccctctcatctgtagccaccatctctgacaca
gccaacacaatctatgaccccgcccaggacagcccctctagcgagagcaccgcactcacc
tgtagcctgtctgccccctctactgaccccctgtctacccccgttattgaccccctgcct
gccgctgcccccgccccggcacccacctcagagtccaacacagcccccccagccccactc
atctccacctctgacatcacagcaacccccctgttagaccttctagaagacagctctcct
agagcagaggacaaaatgtctgaaactgctgttagtgccacagattgccataaatctctt
aaaaagtcccctattccaataccacctaggcgtcgaaactctaacagacctgctccttct
cctcccactcccaagagccccacacctacccactccaccactgtggcccccaggaaatct
gccccagacagtccctctcttgccccctccactgcctctcctatccaaaacacgaggaaa
gctgctccctctcctgctcctatggcgttcactttcccagcctctgacacctccactgat
aaacctgcacctactgccaccagcactgttacccctgtccctggtacccctactgtcctg
ggctctagtacaccagcccctgaccctgacaaacctgactctactaccaaagacactcac
actcctgcccctaatatagaccccactaccactcccacatctgtccctaatatagacccc
actaccactcccacatctgtccctaatatagaccccactaccactcccacatatgtccct
aatatagaccccactaccactcccacatctgtccctagtgctcctactactgccttcaat
gctgatgtaactgctgctatcgttcatgaggacacaaccaaatctgcccttgttttccca
gacattctcattcccactcctgctcccacaagtgcccccacacctgcccctaatgctccc
actgctccgagctttgccacacctgctgcccccacggtcactatcacacctgcctctact
acctacgacaccccaacaccaaccctgaccccccacatacccatcaccacagagccccaa
gccccagagatagagtttgagttgaccaatggggtggcgactaagagcccctccctgccc
ccagcagggtccactgggtttcagagtagtcccactccctcccctgcccctgtcccttcc
tcctcctccttccaggctaacggagatgggttcggggcagacctccaggcctcaggccct
cctgctctggaggagttagacagtctggccaaggctgctccactcaacaacgagaagata
tttggagatgagaagagtaaagtggaggaggtgaagacagcccagtcagaggtgaccaca
gaacacaacgatgtcacacagacaagcgacagcaaggcatga
DBGET
integrated database retrieval system
