Oncorhynchus tshawytscha (Chinook salmon): 112265553
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Entry
112265553 CDS
T05605
Name
(RefSeq) vacuolar protein sorting-associated protein 26B-like
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112265553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265553
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
112265553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
112265553
NCBI-ProteinID:
XP_024298722
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Position
LG13:67657530..67661182
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AA seq
333 aa
AA seq
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MSFFSFGQSAEIDVVLTDAETRKKAEHKTEDGKKDKYFLFYDGETVSGKINVTLKNPRKR
LEHQGIKIEFVGQIELYYDRGNHHEFVSLVKDLARPGELTQSQTFDFEFTHVEKPYETYT
GQNVKLRYFLRATVSRRLNDISKEMDIVVHTLSTYPELNSSIKMEVGIEDCLHIEFEYNK
SKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPSVYHENDTIAKYEIMDGAPVR
GESIPIRLFLAGYEMTPTMRDINKKFSVRYYLNLVLIDEEERRYFKQQEITLWRKGDVVR
KSMSSQATIGAQRFEGSASSESALEKAAREDSG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttcagttttggccaaagtgcagaaattgatgtagttctgactgatgctgag
acgagaaagaaggctgaacataagactgaagatgggaagaaggacaaatatttcctattt
tatgacggggagactgtgtctggaaagatcaacgttacactgaagaaccctaggaaaaga
ctggaacatcaagggatcaaaatcgaatttgtaggccaaattgagctgtactacgacaga
ggaaaccatcatgagtttgtctccttggtgaaagatctggcaaggcctggggagcttact
cagtcacagacctttgattttgagttcacccatgttgagaagccctatgagacctacaca
ggccagaatgtgaagctgcggtattttctgcgtgctacggtgagcaggagactgaatgac
atcagtaaagagatggatatcgtggtgcacacactcagcacttacccagagctcaactca
tcaataaaaatggaagttgggattgaagactgtctccacattgagtttgagtacaacaaa
tccaagtaccacctgaaagacgtaattgtgggtaagatctacttcctgctggtgcggatt
aagataaagcacatggagattgacatcatcaaacgggagacaactggcaccggtcctagt
gtataccatgaaaatgacaccatcgccaaatatgagatcatggatggggctcccgtccga
ggagagtcaattccaatccggttgtttctggctggctatgagatgactcccaccatgcga
gacattaataagaagttctctgtgcgttactaccttaacttggtgctgattgatgaggag
gagagacgctacttcaaacagcaggaaatcacactgtggaggaaaggggatgtggtgagg
aagagcatgtcgagccaggccaccatcggagcccagcggttcgagggctcagccagttca
gagagtgctctggagaaggcggcgagggaggacagcggctaa
DBGET
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