Oncorhynchus tshawytscha (Chinook salmon): 112265564
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Entry
112265564 CDS
T05605
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112265564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112265564
04090 CD molecules [BR:
otw04090
]
112265564
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
ALCAM
112265564
CD molecules [BR:
otw04090
]
Proteins
112265564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
Syndecan
DUF6773
DUF6377
Motif
Other DBs
NCBI-GeneID:
112265564
NCBI-ProteinID:
XP_024298743
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All DBs
Position
LG13:68022659..68087375
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AA seq
563 aa
AA seq
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MHFSSCLCTLLVALVYQGTYLSAMDTVIGLYGETVEVPCNNGAPKPKDLFITKWKYDNGD
LLTQLKDQDASVIATNQYKDRVSMAENSSLLIAAASLKDEKIFTCMVVAGADISEYPVKL
LIHKAPTRVEITALAAELEIGKPTQLGQCSAPDSNPAANITWFKNKKHLVADGKGIIISS
KVKVDEVTGLTTTSSTLQYTAEKGDTDALFTCGTLNALSSPVSFTVTYPTERVSLHVISK
GPLMEGDNVTLKCKADGNPLPTSFNFHIQRKVVKVENSDSYTVTDVTRDSTGEYKCSIVD
NAKMEDSKNITINYLDMSLSPSEKVMKSAGESLALNLQTDASGELRVSWTKDNGKLDKMP
KFDKLTYSDSGKYEVVVTMGALIKKASFELVVEGIPVIRRLAKQRGEDGQHKVLTCEAEG
SPKPTVAWSVNGTSADESPYVNGKISYKLTIVPTVNLTVVCTVSNELGQDTRAINVSTLF
EEVRMDKQGSSDDSDTTKLVVGVIVGLLLATVVVGLAYWLYMKKSKQGSWKTGEKEDGST
EESKKLEEKIEEKLEENSQKVEV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcacttttcaagctgtctgtgtaccctcctcgtcgcgcttgtctaccaaggtacttac
ttgagcgctatggatactgttatcggcctgtatggagagaccgttgaggtgccatgcaac
aatggagcccccaaaccaaaggacctgttcataacaaaatggaaatacgacaatggggac
ctgctgacccagctgaaagaccaggatgcctctgtcatagccaccaaccagtacaaagac
cgtgtcagcatggccgaaaactccagcctgctgattgctgcagcatcactgaaggatgag
aagattttcacctgcatggtggtggctggggctgacatctcagaataccctgtcaaactc
cttatccacaaggctccaaccagagtggagatcacagccctagccgcagagctggagatt
ggcaaaccaacccagctagggcagtgcagcgcccctgattccaacccagctgccaacatc
acatggttcaagaacaagaaacatctggtggcggatgggaaaggcattataatcagttcc
aaagtgaaggtggacgaagtcactggcctcactaccacttcctccactcttcagtacaca
gctgagaagggagacacagatgctctgttcacctgtgggaccctgaacgcattgtcctcc
ccagtctccttcactgtcacctaccccacagagagggtcagtctacatgtaatttctaaa
gggccccttatggaaggagacaacgtgactctgaagtgcaaggccgatgggaacccactt
cccaccagcttcaacttccacattcagagaaaggtggtgaaggtggagaactctgactcc
tacactgtgactgatgtcacacgtgacagcacaggggaatacaagtgttctatcgttgac
aatgccaagatggaagactccaagaacattaccatcaattacctggatatgagtttgagc
ccctctgagaaggtcatgaagagcgccggcgaaagcttggctctgaacctgcagaccgat
gcgtctggagaactcagggtgtcctggactaaggacaatggcaagctagacaaaatgcct
aagtttgacaagctgacctactctgattctggaaagtatgaggttgtggtcaccatgggc
gctctcatcaagaaagcctctttcgagctggtcgttgaaggtattccagtcatccggcgg
ttggccaagcagcgtggcgaggacggccagcacaaggtactgacctgcgaggctgagggc
tcccccaaacccactgtggcctggagcgtcaacggcacctcggctgatgaaagtccctac
gtcaatgggaagatctcatacaagctgaccattgtgcctacagtcaacctgaccgttgtc
tgcactgtgtccaatgagcttggccaggacaccagggctattaacgtgtcgaccttattt
gaggaggtgagaatggataaacaaggctcatcagatgacagtgacacaacaaagttggtg
gtgggagttattgttggtctgctcctggccactgtagttgtgggtctagcatactggctg
tacatgaagaaatccaagcaaggcagctggaagactggtgagaaggaggatggatccact
gaggagagcaagaaactagaggagaaaatagaggagaagctggaggaaaacagccagaaa
gttgaggtgtaa
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integrated database retrieval system
