Oncorhynchus tshawytscha (Chinook salmon): 112265575
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Entry
112265575 CDS
T05605
Symbol
vmp1
Name
(RefSeq) vacuole membrane protein 1
KO
K21248
vacuole membrane protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112265575 (vmp1)
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Gene cluster
GFIT
Motif
Pfam:
SNARE_assoc
Wzz
Motif
Other DBs
NCBI-GeneID:
112265575
NCBI-ProteinID:
XP_024298764
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Position
LG13:complement(68298234..68318842)
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AA seq
407 aa
AA seq
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MAKNGASCEQPQKRGTKDKQNGHFADSAVSERRQKDREERLALVLWRRPIVTLNYFLLET
FITLKEWTLKLWQRRGTVFLILVLCSLFSLAYSTEGAHQKYVQYLEKRFLWCAYWVGLGI
LSSVGLGTGLHTFLLYLGPHIASVTLAAYECGSTDFPEPPYPDQIICPEGGVEGSISLWS
IVSKVRLEACMWGAGTAIGELPPYFMARAARLSGADPDDEDYEEFEEMLEQAQTAQDFVT
RAKLGVQNMVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIVKMH
IQKLFVIITFSKHIVEQMVSLIGSLPRVGPSIQKPFSEYLEAQRSKLHHHTGAGTPATEN
WLSWVFEKVVLVMVCYFIFSIINSMAQSYAKRRQQSRQQRYTEEKTK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatggggcaagctgtgaacaaccacagaagcgaggaaccaaagacaaacag
aatggacattttgcagactctgcggtgagtgagaggaggcagaaagatcgggaggagcgt
ctcgctctggtgctgtggaggaggcctatcgtcacactaaactacttcctcttggaaacc
ttcatcacactaaaggaatggacattaaagttatggcaaagaaggggtacagtgttcttg
atcctggtattgtgttcactcttctcccttgcctactccactgagggagcacaccagaag
tatgtgcagtacctggagaagaggttcctgtggtgtgcctactgggtaggtttgggcatc
ctgtcctcagtaggccttgggactggcctacataccttcctactatacctgggtccacac
atagcatcagtcaccctggctgcgtacgagtgtggttctacagacttccccgagcccccc
tacccagaccagatcatctgtccagagggaggagtggagggcagcatctcactctggtcc
attgtctcaaaggtccgcctggaagcctgtatgtggggtgcaggtacagctattggggag
ttgcccccctacttcatggcccgagcagccaggctatctggagcagacccagacgacgaa
gactatgaggagtttgaggagatgctggagcaggcacagactgctcaggattttgtcaca
agagcaaaactgggcgttcagaacatggtgcagaaagtgggattctttgggattctagcc
tgcgcctcgatacctaatcctctgtttgacctggctggtataacatgtggccacttcctg
gtaccattttggaccttctttggagcgacgcttattgggaaagccatcgtcaagatgcac
atacaaaaactgtttgttattataacgttcagcaagcacatagtggaacagatggtgtct
ctgatcgggtctctgccgagggtaggtccctccatacagaagcctttcagtgagtacctg
gaggcccagaggagtaaactccaccaccacactggcgctggcaccccggcgactgagaac
tggctgtcatgggtctttgagaaggtggttctggtcatggtctgttactttatcttctcc
atcatcaactccatggctcagagctacgccaagcgacgacaacagagtcggcagcagagg
tacactgaggagaaaaccaagtga
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