Oncorhynchus tshawytscha (Chinook salmon): 112265581
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Entry
112265581 CDS
T05605
Name
(RefSeq) Down syndrome cell adhesion molecule homolog
KO
K06767
Down syndrome cell adhesion molecule
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112265581
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
DSCAM family
112265581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
Interfer-bind
C2-set_3
Ig_C17orf99
fn3_2
ARM_TT21_4th
DUF6249
Motif
Other DBs
NCBI-GeneID:
112265581
NCBI-ProteinID:
XP_024298770
UniProt:
A0A8C8JRI8
LinkDB
All DBs
Position
LG13:68424590..68557550
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AA seq
2029 aa
AA seq
DB search
MWIFAVIFFQSILNVFSEDLRSSLYFVNASLQEVVFASTTGTLVPCPAAGVPPASLRWYL
ATEEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VFREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYVTVVSWEKDTVSLSSGPRFLITTTGA
LYILDVQNEDGLYNYRCTTRHRYTGETRQSNSARLFVSDPTNSEPGILDGFDRREVMASH
RVELPCKASGHPMPKYRWLKDNSPLEPDTRFHQSVTGLLIESAQPTDSGTYVCEVWNSYG
NAEVVGRLLVKQPLKAVVSPRKVKGSVGSKVSLHCSVSGSDEYELSWYRNGEIIYPGNNV
RITGISRENLIMEGMAKSDGGAYQCFARKNKMSAQDFVPVILEDGTPKILSSFSEKVVNP
NEPVFLVCNVKGTPPPSCTWNLDDDPVIKDNHHHPGHYETNEGHVVSQLNITHTKEVDGG
VYRCTCRNSAGAVYHQARINVRGAASIRPMKNITAIAGRDAYVHCRVIGYPYYSIKWYKN
SHLLPFNHRQRAFENNGTLKLSNVQELDQGEYNCRVLVKPHQETNQSVHLSVKVPPYIQP
FAFQRFSIGQRVFIPCVVMSGDQPLDITWQKDGRPIPASLGVTIDNIEFTSSLRISNLSP
DHNGNYTCIARNEAAAVEHQSQLIVRVPPQFVVQPTDQDGIYGKTVTLNCSAEGYPRPTL
VWKHSKGNGVPQFQPIALNSGSRIQLLVNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTMATVGQQKEMSCTAHGEKPIMVRWEKEERIINPETSRYTVVV
KEVADEVISTLKILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEVEIREVRDR
TIALRWTMGFDGNSPITGYDIECKNKSASWNSAQITKDVSPQLNQATIIDLHPSSTYNIR
IFAKNDIGKSDTSNELTITTDEAAPDGPPQEVQLEATSPQSIKVTWKAPHKHLQNGVIRG
YQVGYREYSSGGSFQFNIISMDTTGDSSESITLDNLRKFTEYGVVVQAANRAGTGPSSQE
VITKTLEDVPSRPPENVLAMAKSPEVISLSWLTLPKEALNGNLQGYRVIYWANLPDGELG
EIRNVTTSYPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDIPGPPAGVKAA
ASTSSVVFVSWLPPLKLNGIIRKYIVFCSNHPTVMSEFEASPDVYFYRVPNLARNRKYSI
WVVAVTAAGRGNSSETITVEPRAKAPARILTFNGTVTTPWMRDIILPCKAVGDPPPTIKW
LKANNGTPAPVLIDGRHSVHSNASFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQVP
PDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLE
NLKCGTWYKFTLTAQNGVGPGRISEIIEAKTHGKEPQFAKEHELFASINSTRVRLNLIGW
NNGGCPITSFTLEYHPMDTATWTTAQRTSLTKSYILYDLAEATWYELQMKVVNSAGSAEK
KIMFATLNADGSTIPPLLKTVDPITDNMSGNEGLKMMVTITCILVAAVMVFILLMVLRRR
RREQRLKRLRDAKSLAEMLMSKNTRTPDTSNKQQTMRMHIDIPRAQLLIEERDTMEIIDD
RSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAGP
AASRNRYASQWTLNRPQPPTSSHTLSTDWRLPTPRAAGSVDKESDSYSVSPSQDTDRARS
SMVSTESASSTYEELARAYEHAKMEEHLRHAKFTITECFISDTSSEQMTAGTNDYTDSLA
SSTPSESGICRFTASPPKPQDISRVMNMAAPKAHRPGGELVHLPPYLRMDFLLNRGSVSG
GRGSNGGNGGGEAGALGQACLEPQKSRTLKRPPLLEPTPMEVPTSREVQQWQPGTASTLP
QREPTGREATGDLAQAQAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6090 nt
NT seq
+upstream
nt +downstream
nt
atgtggatatttgcagttatctttttccagagcatcttaaatgtttttagtgaagatcta
cgttccagcttatattttgtcaatgcatctttgcaagaggtagtgtttgccagcaccaca
gggaccctggtgccctgtcccgctgcaggggtgccccccgcctcgctgcgctggtatctg
gccaccgaagaggagatctacgatgtgcccgggatccgccacgtgcaccccaatggcacc
ctccagatctttaacttcctcccctccagctttagtaagctaatccatgacaatacctac
tattgcacagctgaaaatccttcaggaaaaataagaagtcaagatgtccacattaaggcc
gtatttcgggaaccctacaccgttcgggtggaggaccagaaagccatgagaggcaatgta
gcggtcttcaagtgcattatccctgcctccgtggaggcttacgtcactgtcgtatcgtgg
gagaaagacacagtctcactatcctcaggacctagatttctcatcacaaccacaggagcc
ttgtatattctggatgtccagaatgaggatggattgtataactaccgctgcaccacacgg
catcgctacacgggcgagaccaggcaaagcaacagcgcccggctttttgtgtcagatccc
accaactcagagccggggattctggatggctttgaccgtcgggaggtcatggcgtcccat
cgggtagagctgccctgtaaggcgtcgggccatcccatgcccaagtaccgctggctgaag
gacaacagccccctggagccagacacacgtttccaccagagtgtcacgggcttgctgata
gagagcgcccagcccaccgactctggcacctacgtgtgtgaggtgtggaacagctatggc
aacgctgaggtggtgggccggctgcttgtcaaacagcccctgaaggcagtggtcagccca
cgaaaggtgaagggcagcgtgggtagtaaggtgtccttgcattgcagtgtcagtggctct
gatgagtacgagctgtcgtggtaccgtaacggagagatcatctatcccggcaacaacgtg
cggatcacaggcatcagcagggagaacctgatcatggagggcatggccaagagcgacgga
ggggcctaccaatgtttcgccaggaagaacaaaatgtccgctcaggattttgttccggtc
atcttggaggacggcactccgaagattctgtcctccttcagtgagaaggtggtcaacccc
aacgaaccggtcttcctggtgtgtaacgtcaaaggcactccccctccctcctgcacctgg
aacctggacgacgacccggtcatcaaggacaaccaccaccaccccggccactacgagacc
aacgagggccacgtggtcagccagctgaacatcactcacactaaggaggtggacggaggg
gtgtatcgctgcacctgcaggaactcggccggggcagtctaccaccaggctcgaataaac
gtaagaggggctgccagcatccgtccaatgaaaaacatcacggccatcgcagggcgggac
gcgtacgtccactgtcgcgtcattggctacccgtattattccatcaagtggtataagaac
tcccacctgctccccttcaaccacaggcagagggcctttgagaacaacggcactctgaag
ctgtccaacgtgcaggagctggaccagggagagtacaattgcagggtattggtcaaacct
caccaagagaccaatcagagcgtccatctcagtgtcaaagttccaccgtacatccagccc
tttgcattccagcggttctccattggccagcgtgtcttcatcccctgcgtggtaatgtca
ggtgaccagcccctggacatcacatggcaaaaggatgggcggccaatccctgccagtctg
ggggtcaccattgacaacatagagttcaccagctcactgcggatctccaacctgtcccca
gaccacaacggaaactacacctgcattgcacgcaacgaggctgcagccgttgagcaccag
agtcagctcattgtcagggttcctccccagtttgtggtgcagcccacagaccaggatggg
atctatggcaaaactgtgacactaaactgctctgctgagggttatccacgccccaccctc
gtatggaaacactccaaaggtaacggggttccccagttccagcccatcgccctgaactct
ggctctcgtatccagctgctggtcaatggctctctgctaatcaaacacgtactagaggag
gacagcggctactacctgtgtaaggtcagcaacgatgtgggagctgacgttagcaagtcc
atgtacctcaccgtcaaaatcccagccatgatcacgtcgtaccccaacaccaccatggcc
acggtgggccagcagaaggagatgagctgcacggcccacggggagaagcccatcatggtg
cgctgggagaaggaggaacgcatcatcaacccagagaccagccgctacaccgtcgtggtc
aaagaggtggctgacgaggtcatctccactctgaagattttgcccactgttcgggaagat
tctggattcttctcctgccatgccatcaactcctatggtgaagacagagggatcattcag
ttaacagtacaagaacctccagaccctcccgaggtggagatccgagaggtcagagaccgg
acaattgccctccgctggaccatgggctttgacggaaacagccctatcacaggatatgac
attgagtgcaagaacaaatcagcctcgtggaattcagcccagataacaaaagacgtgtcc
ccccagctgaaccaggccaccattatagacctgcacccctcctccacctacaacatccgc
atttttgccaagaacgacatcggcaagagcgataccagcaacgagctcactatcaccact
gacgaagcagcccctgatggccctccacaagaagtacaactggaggccacctctccacaa
agcatcaaagtcacctggaaggccccccacaagcaccttcagaatggggtgatccggggc
taccaggtgggttacagagagtacagctctggaggcagcttccagtttaacatcatcagc
atggacaccacaggggacagcagcgagagcatcaccctggacaacctgaggaagttcact
gagtacggggtggtggtgcaggcggctaaccgtgcaggcaccgggccctcctctcaggag
gtcatcaccaaaacactggaggatgtcccctcacgtccccctgagaatgtcctggccatg
gccaagtctccagaagtcatctctctttcctggttgaccctgcccaaagaggccctcaat
ggaaacctgcagggctacagagtcatctactgggccaatctgccagatggagagttggga
gagatcaggaacgtgacgacctcctacccgtctctggaactggatggtctggagaaatac
accaactacagcatccaggttctggccttcacccgggccggggacggggtgcgcagcgag
cagatcttcacccggaccaaggaagacatccctgggcctccagcgggggttaaggccgca
gcctccaccagctccgtggtgtttgtgtcctggctcccacctctcaaactcaacggcatc
attaggaagtacatcgtcttctgctccaaccaccccactgtgatgagtgagtttgaggct
tctcctgatgtatatttctacagagtgccaaacctggcccgcaacaggaagtacagcatc
tgggtggttgccgtgacagccgctgggcgaggcaacagcagtgagaccatcacagtggaa
ccccgggccaaagctccggccaggatcctgacgttcaacggaacagtgactacaccctgg
atgagggacatcattctgccctgcaaggcggtcggagatccaccccccaccatcaagtgg
ctgaaggcaaacaatggtacccctgctcctgttctgattgacggacgccacagtgtccat
agcaacgctagtttcatcatccggacggtgaaagcagaggactctgggaactacagctgt
gtggccagcaacaactggggctctgatgaaatcacgctgaacctgcaggttcaagttcct
ccagaccaaccacgcctcacagttaccaagacaactaccacgtcaatcactctgtcctgg
atacctggggacaatggaggaagctccatcagaggctacatcctgcagtactcagaggac
aacagtgagcagtggggcagctttcccatcagccctagtgagcggtcgtaccgtctggag
aacctgaagtgtggcacctggtacaagttcactctgactgctcagaacggagtgggcccc
ggacgcatcagtgagatcattgaagcaaagacccacggcaaagagccccagtttgccaaa
gaacatgagctgtttgccagcatcaactccacccgggtcaggctcaatctaattgggtgg
aacaatggtggctgcccaatcacctcgttcaccctggagtaccatccgatggacacggca
acgtggaccacggctcagcgcacctccctaaccaagagctacatcctgtatgacctggcg
gaggcaacctggtacgagctgcagatgaaagtggtcaatagcgccggctctgccgagaag
aagatcatgttcgccacactcaacgccgatggaagcaccatccctcctctgttgaagaca
gtggaccccatcacagacaacatgtcaggcaacgaggggctgaagatgatggtgaccatc
acctgtatcctggtggctgctgtcatggtcttcatcctcctgatggtgctgaggaggagg
aggagggagcagaggctcaagaggctacgcgacgcaaaaagcctggcagaaatgctgatg
agtaaaaacacacggacaccagacacatccaacaagcagcagaccatgagaatgcacatc
gatatcccccgagcccagctgctcatcgaggagcgagatactatggagattattgacgac
aggtcgacggtgctgctgactgataatgactttggggagacgtccaaacagaagtcgtcc
acggtcacgcacacagtccattaccagtccctgtcgcaggccaccggcccactggtggac
gtctccgacgcccggcctggaaccaaccccacagcacgccgcactgccaaagcaggccct
gcagccagcaggaaccgctatgccagccagtggactctgaaccggccacaaccacccacc
tcctcccacaccctgagcacagactggagactgcccacaccgcgtgctgccggctctgtg
gacaaggagagcgacagctacagcgtcagcccatcgcaggacacagaccgcgcgcggagc
agcatggtgtcgacagagagcgcgtcgtccacgtacgaggagctggcccgggcctacgag
cacgccaagatggaggagcacctgcggcacgccaagttcactatcacagagtgcttcatc
tccgacacctcctcggagcaaatgacggccggcaccaatgactacacagacagcctggca
tctagcacgccgtctgagtcaggcatctgcaggttcacagcctccccgcccaagcctcag
gacatcagccgggtcatgaacatggccgcaccaaaggcccacagaccgggtggagagctg
gtgcacctgcccccgtacctacgcatggacttcctgttaaaccgtggctctgtgtcggga
ggccgggggtccaacggtggtaacggaggaggggaggcaggggcgttgggccaggcgtgt
ctggagcctcagaagagccgcaccctgaaacggcccccgctcctggagcccacacccatg
gaggtgcccacgtccagggaggtgcagcagtggcagccagggactgcctccaccctgccc
cagcgtgagcccactggccgtgaggccaccggagacctggcccaggcacaggccgccaag
ctcagtagctcacaggagtccctgctagattccagaggacacttaaaacagagcaacaac
ccctacgcaaagtcctacacactggtataa
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