Oncorhynchus tshawytscha (Chinook salmon): 112265683
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Entry
112265683 CDS
T05605
Symbol
ngef
Name
(RefSeq) ephexin-1 isoform X1
KO
K07525
neuronal guanine nucleotide exchange factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265683 (ngef)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112265683 (ngef)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
PH
Syntaxin_2
SesA
Motif
Other DBs
NCBI-GeneID:
112265683
NCBI-ProteinID:
XP_024298987
LinkDB
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Position
LG13:75286037..75309594
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AA seq
788 aa
AA seq
DB search
MAMTALFRGKWGQKSQEPPEKRPAAPVHSRNHEEDEEDDRVIAPIRRNSRFYRSMRKKRL
AASEQPESPAVSLRPGPEPSPASRSGSSTLSVPDLQKPPLSPRARRMPTSPRPLHSGTVL
PSNGEPRSPHILSSGASSPLWMRSGEGGRKSADASPASGQCGGGSTSFSSVSSALLYRTH
GMHAHTEDMESLSERTAACSVREPGGGTQSPQPAEEGVDVEGVKLSNGERKGSTPLKIES
ICYSLNIVKNIAFLYQEYRDTSKQQEIEQRRQQEGLTYGVSAGLGVTSPPALQLQLRNNS
RSLSLWQNLEVVQQSGLLTQLLQREIIIQEAMFELVTSEASYYKSLEVLETHFLKNPVLV
NTLSQSDMHFLFSNIEEVMKASERFLMDLENRIEQSLQISEVCDIVHHHAVKHFHVFITY
VINQVYQEKNYRRILQGNQLFREAMAQLENHPCVRGLSFTSFLILPFQRITRLKMLVQNI
LKKAEENSEIEANAIKAHQQLEQIVKECNEGVRKMSRTEELISIEKTLEFKSKSVPVISH
SRWLLKKGEVQQMAGPKSTRTMRSKKLHHPVYLFLFNNLLLITKRNSSGEKYQVLDSSTR
AMLRTEDLEDQGQMLANVFNLKLLENQEERPVNYMLKTSSMSDKLRWICALTPNRRTRFM
STSAHQPASPQVQCIQSYSSQEPDELSIEMADLLNILERTDDGWMMGERLHDGERGWFPC
RVVEEIQNQEVRAQNLRECQRIHLAHGGGASSGARLGSRGARRTPKTPKVSNFFGTWTDQ
SEEEQGST
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgacggccctgttcaggggcaaatggggtcaaaagtcacaggagccccctgag
aagcggcccgcagcgccggtgcactccagaaatcacgaggaggatgaggaggatgacagg
gtcatcgcccccatccgcaggaactcccgtttctaccgttccatgaggaagaagaggctg
gccgcgtcagaacaacctgaaagccctgcagtctctctgaggcctggcccagagcccagc
ccagccagcaggtcaggcagcagcaccctcagtgtccctgatctccagaaacctccccta
tctccccgggcacgacgtatgccaacatctcctcgtccactccattctggaactgtgttg
ccaagcaacggggagcccaggagcccacacatactttctagcggggcttcttcccctctt
tggatgaggagcggagaaggagggaggaagagcgcagatgcttctccagctagcggtcag
tgtggagggggttccacttccttctcctctgtttctagcgctctgttgtatcggacacat
ggcatgcacgcacacactgaagacatggagagcctctcagaacgcaccgccgcctgctct
gtacgggagcccggaggggggacacagtcaccgcaaccagcggaagagggggtcgacgta
gagggagtcaaactcagcaatggggaaagaaagggctcaacaccattgaaaatagaatcc
atctgctacagtctcaacattgtcaagaacattgccttcctgtaccaggagtaccgggac
acatccaagcagcaggagatcgagcagcgacggcagcaggaagggttgacctatggggtc
agcgcggggttaggggtgacgtccccaccagccctgcagctgcagttgaggaacaactcc
cgctctctgagtctgtggcagaacctggaggttgtgcagcagagcggcctactcacgcag
ctactgcagagagagatcatcatacaagaggccatgtttgagctggtaacctcagaggcg
tcctactacaagagtctggaggtgctggagacccacttcctgaagaaccctgtgctggtc
aacacactcagccaatcagacatgcacttcctgttctccaacattgaggaggtgatgaag
gccagtgagaggttcctgatggacctggagaaccgcatcgaacagtccctccagatctca
gaggtgtgtgacatcgtccatcaccacgccgtcaagcacttccacgtctttatcacctac
gtcatcaaccaggtgtatcaggagaagaactaccgacgcattctacagggaaatcagtta
ttccgcgaggccatggctcagctggagaaccatccgtgtgtccgaggcctgtccttcaca
tccttcctcatcctccccttccagaggatcacacgactcaaaatgctggtccagaacatt
ctgaagaaggcagaggagaattcagagattgaggctaatgctatcaaggctcaccagcag
ctggagcagattgtgaaggagtgcaacgagggtgtgaggaagatgagtcgtacagaggaa
ctcatcagcattgagaaaacactggagttcaagtctaagtcagtgccggtgatctctcac
tcccgctggctgctgaagaagggtgaggtgcagcagatggctgggcccaagagcactagg
accatgcggagcaagaagctccaccaccctgtctacctgttcctcttcaacaacctgctg
ctcatcaccaagcgcaactccagtggtgagaagtaccaggtgctggactcgagcacgcgg
gccatgctgagaactgaggacctggaagaccagggtcagatgctggccaatgtgttcaac
ctgaaactcctggagaaccaggaggagaggcctgtcaactacatgctcaagacctccagc
atgagtgataagctgcggtggatatgtgctctcacgccaaatcgccgcacacgattcatg
tccaccagtgcccatcaaccagcttctccccaggtccagtgtattcagtcgtactcttct
caggagccagatgagctgtccattgagatggctgacttgctgaacatcctggagaggaca
gacgatggctggatgatgggtgagaggctccatgatggagagaggggctggttcccctgt
cgggtggtagaagagatccagaaccaggaagtgcgggcccagaacctcagggagtgccag
aggatccacctggcccatggagggggtgcttcctcaggggccagactgggctccaggggg
gccagacgcacccccaaaacacccaaagtctccaacttcttcggtacctggactgaccag
tcagaggaggagcagggaagcacataa
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