Oncorhynchus tshawytscha (Chinook salmon): 112265693
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Entry
112265693 CDS
T05605
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112265693 (smc4)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
112265693 (smc4)
Condensin II
112265693 (smc4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
CCDC113_CCDC96_CC
ABC_tran
Motif
Other DBs
NCBI-GeneID:
112265693
NCBI-ProteinID:
XP_042152018
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All DBs
Position
LG13:60447587..60468766
Genome browser
AA seq
1295 aa
AA seq
DB search
MPAKTSKSSTASKSRGKGSQPRDDSEDELDVPLKEANSNGQEALPTNYPAPREGADAVDN
RSLEEILGSIPPPPPPAMTNEPGSPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIGPN
GSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDLHKDVQSCTVEVHFQKIIDKEGDDY
EVIPNSKFYVSRTASKDNSSSYHINGKKATFKDVGMLLRSHGIDLDHNRFLILQGEVEQI
AMMKPKGQTEHDEGMLEYLEDIIGSCRLKQPIHTLSRRVELLNEQRGEKLNRVKMVEKEK
TALEGEKNTAVEFLTLENDIFKQKSQLCQYYVHDLQKRVANKEEEKQRIQDDTKELTEKN
NNIAEEMEKKNRDLKNVEKKQGKLTKYIEGQKEKFTQLDLQDVEVREKLKHTKSKTKKLQ
KQLEKDREKLEEVRNVPASSEKTISEASARREELEKQKGKEEEKLKEVMASLKEETSGLQ
QEKEIKEKELMELSKAVNETRSCQDVAQSELDIYLSRHNTAVTQLNTAKQSLQTTTDTLR
DRRTAIKELQVNIPQCEQELKKDEAELEQLLQADGQARELVRDLRQKVEEAKSSLSSNRS
RGKVLDALMQQKRSGKISGILGRLGDLGAIDEKYDIAISSSCGSLDNILVDSIDTAQKCV
NFLKAQNIGVATFIGLDKMKVWENKMGPISTPENIPRLFDMVRVQDESMKPAFYFALRDT
LVAKDLEQATRLAFQKDKRWRVVTMQGQIIEMAGTMTGGGGRVMRGRMGSSIGTEVTQQE
LDRMESKLNEKVVQLQGCQERKLQLEEKVQRLRQQLRDMKNTLEKYTNSMQSLAEQEVHL
KPQIKELEANVQAAAPDKKQQKQLEKRLKDFQKDFEAASSKAGKVEAEVKRLHTLIVDIN
SHKLKAQQDKLDKVNKELDDCSSAITKAQVAIKTAGRNLKKCEEGVSRLEGELVENEKSL
VDLTEHLTRLEEEAGEIMKACQEAEAALPEVQEQHQVVVREIKVLQEQEHALQEESLGVR
LRVEQIDTSITEHTNKIKHWQREASKLSLHAIEDKPAEALPALTPADLAAIKGPDVITNQ
ISLMEARCAQMKPNLGAIAEYKKKEELYLKRVAELDEITTERDNFKRGCEDLRKQRLNEF
MAGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGE
KTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNM
FEIADRLIGIYKTHNTTKSVGINPKTIVFKEPISV
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaaaacgtcgaaaagttcaactgcttccaagtctagagggaaagggtcgcag
cctcgggatgactccgaagacgagttggacgtaccccttaaagaagcgaactccaatggc
caagaggcactgccgacaaattatccggctcccagggagggtgccgatgctgttgataat
cgaagtttggaggagattcttggtagcatccctccacccccgcccccagcaatgaccaat
gaaccaggctctcctcgcttgatgataacacatatagttaatcagaacttcaaatcctat
gctggcgagcagattctgggccctttccataagcgcttttcctgtatcattggtccaaat
ggcagtgggaagtccaacgtgatagattcaatgctctttgtgttcggctatagggctcaa
aaaatcagatccaaaaaactctctgtgctgattcacagctctgacctacacaaggatgtg
cagagctgcactgtggaagtgcattttcagaaaattattgacaaggaaggagatgactac
gaagtcatccccaacagcaagttctatgtttcaagaactgccagcaaagacaattcctca
tcctaccacatcaatggcaagaaggccacttttaaagatgtgggaatgctgctgcgtagc
catggcattgacctggaccacaacagatttctgattttacagggtgaggtggagcagata
gccatgatgaagcccaaggggcagacggagcacgacgagggcatgctggaataccttgag
gacatcattggctcctgccgtctgaagcagcccatccacaccctgagccgccgcgtggag
ctcctcaacgagcagaggggagagaagctaaacagggtcaaaatggtggagaaggagaag
actgctctggagggagagaagaacaccgccgtggagttcctcactctggagaatgatatt
ttcaaacaaaagagccagctctgccagtactatgtccatgacctccagaagagagtggca
aacaaagaggaggagaagcagaggatccaagatgacaccaaggaactcacagagaaaaac
aacaacatcgctgaggaaatggagaagaagaaccgagacctgaaaaacgtggagaagaaa
caaggcaagctaaccaagtacattgagggccagaaggagaagtttacccagctggacctg
caggatgtggaggtccgagagaaactgaagcacaccaagagtaagaccaagaaactacag
aaacaactggagaaggacagggagaagctggaggaggtgcgtaacgtgccggccagcagt
gagaagaccatctctgaggcgtctgcgcgcagggaggagttggagaaacagaaggggaag
gaggaggagaaactgaaggaagtgatggcgagtctgaaggaggagaccagcggcctgcag
caggagaaggagattaaggaaaaagagctgatggagctgagtaaggctgtgaatgagaca
cgctcctgtcaggatgtggcccagtctgagctggacatctacctgagtcgccacaacacc
gctgtgacccagctaaacacggccaagcagtccctgcagaccaccaccgacacgctgcga
gaccgccgcaccgccatcaaagagctgcaggtcaatataccccagtgtgagcaggagctc
aagaaggatgaggcggagctggagcagctgctgcaagcagacggacaggccagggagctg
gtgagggacttgaggcagaaggtggaagaagccaagagctccctgtcctctaaccgcagc
cgggggaaggtgctggacgccctcatgcagcagaagaggagcggcaagatctccggcatc
ctgggacgactaggtgaccttggggccatcgatgagaagtatgacatcgccatctcatcc
agctgtggctctctggacaacatcctggtggacagcatcgacacggcccagaaatgtgtc
aacttcctcaaggcccagaatatcggtgtggccacctttatcggcctggacaagatgaag
gtgtgggagaataagatggggcccatctccaccccagagaacatcccccgtctgtttgac
atggtgcgggtgcaggatgagagtatgaagccagccttctactttgccctgagggacacc
ctggtggccaaggacctggagcaggcaacacggcttgccttccagaaggacaagcgctgg
agggtggtcaccatgcagggacagatcatagagatggctggcaccatgactggaggtgga
gggagagtgatgcggggcaggatgggctcctccatcggcactgaggtcacccagcaggag
ctggaccgtatggagagcaagctgaatgagaaggtggtgcagctgcagggctgccaggag
aggaagctgcagctggaggagaaagtccagcgactcagacagcagctcagagacatgaag
aacaccctggagaaatacaccaacagcatgcagagcttggcagagcaggaggttcacctg
aagcctcagattaaagagctggaggccaatgtccaggcagctgcccctgacaagaaacaa
cagaaacagttggagaagcgcctgaaggacttccagaaagactttgaggcagcctcaagt
aaggcagggaaggtggaggctgaggtgaagaggctccacaccctcattgtggacatcaac
agccacaagcttaaggcccagcaggacaaactggacaaggtcaacaaggagctggacgat
tgctcctcagccatcaccaaggcccaggtggccatcaagaccgcagggcgtaacctgaag
aagtgtgaagagggtgtaagtcgtctggagggggagctggtggaaaatgagaagagcctg
gtagacctgacggagcatctgacgaggctggaggaggaggctggggagatcatgaaagcc
tgccaggaggctgaggcggcactgccggaggtgcaggagcagcaccaagtggtggtgagg
gagatcaaggtcctgcaggagcaagagcacgctctgcaggaggagtccctcggcgtccgc
ctccgagtggagcagatagacacctccatcaccgaacacaccaacaagatcaaacactgg
cagagagaggcctctaagctttcccttcatgccattgaggacaaaccagcggaggcgctg
cccgcactgacccctgctgacctggcggccatcaaggggcctgacgtcatcaccaaccag
atctccctaatggaggcccgctgtgcccagatgaagcccaacctgggagccatcgcagag
tacaagaagaaggaggaactgtacctgaagcgtgtggctgagttggatgagatcactaca
gagagagacaacttcaagcgtggctgtgaggacctgcgcaagcagagactcaacgagttc
atggctggcttcaacatcatcaccaacaagctgaaggagaactaccagatgctgacgcta
gggggtgacgctgagctggagctagtcgacagcctggaccccttctctgagggcatcatg
ttcagtgtgcgtccccctaagaagagctggaagaagattttcaacctgtctggaggagag
aagaccctgagctctctggccctggtgtttgcgctgcaccacttcaagcccacgcctctc
tacttcatggatgagattgatgcagccctggacttcaagaacgtctccatcgtggcctgt
tacatttatgagcaaaccaagaacgctcagtttatcatcatctccctgaggaacaacatg
tttgagattgctgaccgtctgatcggcatctacaaaacccacaacaccaccaaaagcgtg
ggaatcaaccctaaaaccattgtcttcaaagagccaatctcagtttag
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