Oncorhynchus tshawytscha (Chinook salmon): 112265787
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Entry
112265787 CDS
T05605
Name
(RefSeq) sorting nexin-9
KO
K17923
sorting nexin-9/18/33
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112265787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265787
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112265787
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112265787
Macropinocytosis
Sorting nexins
112265787
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112265787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_1
SH3_2
SH3_9
Vps5
SH3_3
Motif
Other DBs
NCBI-GeneID:
112265787
NCBI-ProteinID:
XP_042182168
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All DBs
Position
LG08:complement(7923987..8006544)
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AA seq
562 aa
AA seq
DB search
MAMQAQVMYDFSAEPGNNELTVKEGETVTVLNQNVGGGWIEAQNSRGESGLVPEDYLQVG
AVSSTTPETTTYPDAYSPESSNSTNTQIANGDNPWSGGGTYTNKTAGGWDTQGYAQTQQN
AGDDDDDGEWDEEWDDARSTGGYGETTGEEEGEATGRNTHTHMKISLNKFAFSKIPNPEV
YLLAKLPPKGKDRLAIYMGDVGPVWLYPQSPLDCVVADPKKGSKMYGLKSYIEYQVTPNT
TNRPVNHRYKHFDWLYERLLEKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQGWMCRM
CRHPVVSNSDVFQLFLTYRDEKEWKTGKRRAEKDECVGPMVFSLIDPEAPELDIIEVYGA
VCELFSRFTKEMDDGVKDLLNVGNIHWKRCTGPLRKEYQKIGKAFQNLSSVFNTSGYTGE
ATLTDALTAAGKTYEEISQIVAEQPRKDLHFLMETNNEYKGLLGCFPDTIGVHKAAIEKV
REGDKMVAAGKITTQDKGTMAKRISIMCYSLQAEMNHFHSNRIYDYNRVMQLYLEEQIRF
YETVRGVREREGSCYFNMVLLC
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcaggcccaggtgatgtatgacttcagtgccgaaccaggaaataacgagttg
acagtcaaagaaggagagactgtcaccgtcctcaatcagaatgttggtggaggatggata
gaggctcagaactccagaggagaaagtgggctggtgccagaagactacttacaggttggt
gcggtgtcatccacaacaccagagacaactacctatccggatgcctacagccccgagtcc
agcaacagcacaaacactcagattgctaacggtgacaacccttggtctgggggaggaact
tacaccaacaagacagccgggggatgggacacccagggatacgcgcagactcaacagaat
gcaggtgatgatgacgatgatggtgagtgggatgaagagtgggatgatgccagatcaaca
gggggttatggagaaactacaggggaggaggaaggagaggcgacaggccgcaacacacac
acacacatgaagatatccctcaacaagtttgcgttctctaagatccccaacccagaggtg
tacctcctggctaaactaccacccaaaggcaaagacagactggccatctatatgggagat
gtggggccagtgtggctgtatccccagtctcctcttgactgtgtcgtggctgatcctaaa
aagggctctaagatgtatgggctgaagagttacatagaatatcaggtcacacccaacacg
accaacagacctgtcaatcacaggtataagcattttgattggctgtatgagcgcctgttg
gagaagtttggttccgccatccccatcccctcgctgcctgacaaacaagtcacaggtcgt
tttgaggaggagtttatcaagatgaggatggagagactgcagggctggatgtgtcgtatg
tgtcgacatcccgtcgtctccaacagtgacgtcttccaactcttcctcacatacagagac
gagaaggagtggaagaccgggaagaggagagcagagaaggatgagtgtgttggaccaatg
gtcttctccctcatcgaccctgaagctcctgagttagacataatagaagtgtacggagca
gtgtgtgagttgttcagtaggttcactaaagagatggatgatggagttaaagacctgctg
aacgttgggaacatacactggaaacgctgcacaggccctctgcgtaaggagtaccagaag
attgggaaagcctttcagaacctgtcatctgtcttcaacaccagtggctatacaggagag
gccacactcacagatgctctcacagctgcagggaaaacatacgaggagatctcacagatc
gtagctgagcagcccagaaaagaccttcacttcctgatggaaaccaacaacgaatacaaa
gggctgctaggctgcttccctgatactatcggagtacacaaggcggctatagagaaggtg
agggaaggggacaagatggtggcagcagggaagatcaccacacaggataaagggaccatg
gccaaacgcatcagcatcatgtgctactcactacaagctgagatgaaccacttccatagc
aaccgtatctatgactacaacagagtcatgcagctctacctggaagaacagatcaggttc
tatgaaacggtaaggggggtaagagagagggagggttcttgttacttcaacatggtgctg
ctgtgttga
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