Oncorhynchus tshawytscha (Chinook salmon): 112265796
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Entry
112265796 CDS
T05605
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otw03032
]
112265796 (recql4)
03400 DNA repair and recombination proteins [BR:
otw03400
]
112265796 (recql4)
Enzymes [BR:
otw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112265796 (recql4)
DNA replication proteins [BR:
otw03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
112265796 (recql4)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
112265796 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
ResIII
zf-CCHC_3
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
112265796
NCBI-ProteinID:
XP_042151119
UniProt:
A0A8C8EHE9
LinkDB
All DBs
Position
LG13:complement(13035788..13060993)
Genome browser
AA seq
1568 aa
AA seq
DB search
MDRYNDVKILLKTWEQSFVQEHQRKPNKGDIDAAPEEAKKLYKEYRTLKQAKENSNNGHT
DPTPTAQTQSSEKVAGSNPRADKESDCWGTHLNRKSMPVAAPKLTLTPKDKESLQASAQY
FGMKLKSNLGALTKERPVSLKKSFTPRRTPLKSWKDGQSPNPAAGAAGSDTLLSPLLKPA
NTRPHLLACPVQTGTEHPQQPFEPIPAFTPSKLWSPAAGASSDRPAGSRAQQLRQTFTKR
LSSVDSSWLERCQVFDEVGVAEKPVVGNLSLAVVSAVDSPQAKGGGVGEGENPGRAASSF
VIPSMQNEGTTLLGERASKSTMPQALPFSDEQQPKIGCGVTSAAVPASLRSTGQHSSLGS
GSGEGKDGETRPGLRGQAEGGTSEETAIGASTAKKSRARARKGRVGRVEEEAEVSTQPPQ
KAEGDELGPEKKGTKKKAKKRQRDLDTDGENPDDTEKEGAVKKRRTKKVTEAIVDGRSPK
KVPRVTQTGDGNASEQGSGDVTEKEAVKQKPRVPQENLLGEVDEEDVKAARNRGSNTMRP
KPTKNSDCNFVRINLKNKSHVKGYACRGAGLRKQLTMEKFQLKGERFGGPDSRFRGGRGR
GGFRGGFGGFNRPGDTCFKCGGTGHWAMNCKGRVAAPVDGAAAAEASAVEEPFELPTLEE
VARATGTLRSEPRVASPVVKEENEGLGEKQEDGGGDEVLLNVIRPDYERLLPPPPMQPLY
PLGEDGKVQAVPSEVNEALKDFGYKSFRPGQEQAIMRILSGLSTLVVLSTGMGKSLCYQL
PAYLYAQRSNCITLVVSPLVSLMDDQLSGLPSKLKAAAIHSNMSKKQREVAIEKVKAGEV
HVLLLSPEALVGGGHSGSGCLPPADQLPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLR
DRLGVRCLLGLTATATLSTALDIAQNLGITDQDGVAVRSAAVPNNLQLSVSMDRDKDQAL
VCLLKGERFGSLESVIIYCTRREETTRISALLRTCLQGVLLKESNRTANQEADDNPVGKK
KKALARKKIRKPLKWMAESYHAGMSSSERRRVQNNFMCGELRVVVATVAFGMGLDKSDVR
GIVHYNMPKSFESYVQEIGRAGRDGEPAHCHLFLDPEGGDLHELRRHIYADTVDYYTVKK
LVQKVFPPCRCRQIHQNQQDLARTQEEVDDSEMMELMDTCDENPVETPEHTTETGQNTPI
EQLEQVKVPTEDVSTFQPLDGEQKHPPESSVPFPQRGDGEHEEEEQIGGGDDLPTTRVCH
THERAIPMQDTVEALDITEEGLETLLCYLELHPQQWVELLHPTLSTCKMVCYNGPHQLRK
LTKICPPVAVVLARKRLAGERVDTCDSVDFDVVEVADTMGWQLGLVKRGLRQLQWATNRG
VLVEFSNLSFYFRSYGDLTPDEMDQVCEFLHGRVVAQERTKLYQLKACFKAFRSVAFKSC
SVCTDKLDESRSLKLKGLLGDYFDKRRELDLSRKFQEEKDGEDEEEELLKCKMKDFEGQI
RADIQSFLGNRSDEKFSGRAVARIFFGIGSPCYPAQTFGRDKRYWRKYIQFDFNEIIRFA
IQEIIRFK
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atggatcgatacaatgatgtgaagattcttctgaaaacctgggagcagtcatttgttcaa
gaacatcaaagaaagcccaacaagggtgatattgacgcagccccagaagaggctaaaaag
ctctacaaagaatatcgaacactcaagcaagcaaaagaaaacagcaacaatgggcataca
gacccaacacctaccgcacagactcagtcatctgagaaggttgctggatcgaatccccga
gctgacaaggaatccgattgctggggcactcacctgaaccgtaagagcatgccggtggct
gcccccaaactgacgctgacgcccaaggacaaggagtccctccaagcctcggcccagtac
tttggcatgaagctcaagtcaaacctgggtgctctaacaaaggaaagaccggtttctctg
aagaagtcgttcacgccacgtcgaacacctctgaagtcctggaaagacggccagagccca
aaccctgcagctggtgctgcaggcagcgatacactgctatcccctctgctaaagccagcc
aacacacgtccacacctcctggcctgtccagtgcagacagggacagaacacccacagcag
ccctttgagccaataccagccttcacgccctccaaactgtggtctcctgcagcgggggca
tcatcagacagaccagcaggaagtagggcccagcagctcagacagaccttcaccaagagg
ttatcctctgtagacagcagctggctcgagagatgtcaggtgtttgacgaggtgggtgtc
gcggagaagccggttgtgggtaatttgtctctcgccgtggtgtcggcggtagattcacca
caggccaaagggggaggtgttggcgagggagagaacccaggacgtgccgccagttccttt
gtcataccttccatgcagaatgaagggacaactctcctgggggagagggcttccaagagt
accatgccacaggctctgcctttttcagacgagcaacagcccaaaattggttgtggcgta
acgtctgcagcagtcccagccagtctgcggtccactggacaacactcttcattggggtct
ggctccggagagggaaaggatggagaaaccagaccaggtctcagaggacaggccgagggc
ggaacgtcagaagagacagccatcggcgcctccaccgccaagaaatctcgagcaagggcc
agaaagggccgggtaggaagggttgaagaggaggcggaggtgtcgacgcagccaccacag
aaggccgagggtgacgagctcgggccggagaagaaaggtacgaagaaaaaggccaaaaag
aggcaaagggaccttgacacagatggagagaaccctgacgacacagagaaagagggggcg
gtgaaaaagaggagaaccaaaaaggttacagaggctatagttgatggcaggagtcccaaa
aaagtccccagagtgactcagacgggtgatggaaatgctagtgaacaggggagtggtgat
gtcacagagaaggaagcagtgaagcagaaaccaagggttccacaggagaacctcctagga
gaggtggatgaggaagatgtcaaagctgccaggaacagagggagcaacactatgagacct
aaacccaccaagaactcggactgtaactttgtaaggatcaacctgaaaaataagtctcat
gtcaaaggatacgcatgtaggggcgctggcctacggaagcagttgaccatggagaagttc
cagctaaagggggagaggtttggaggaccagactcgcggtttagagggggaaggggcaga
ggagggtttagaggtggcttcggagggttcaatcgtccaggggacacctgcttcaagtgt
ggaggcacaggacactgggctatgaactgcaagggcagagttgcagctccagtagacggt
gctgctgctgctgaggcgtctgcggttgaggagcccttcgaactgcctaccttggaagaa
gttgcccgggcaacgggaacgctgcgttccgagcctcgggtggcgtcccccgttgttaaa
gaggagaatgagggtctgggggagaagcaggaggatggtggtggtgatgaggtcttgttg
aatgtgatcaggccggattacgagcgcctgctccctccgccccccatgcagcccctctac
cccctaggggaggacggcaaagtacaagcggtgccctctgaagttaatgaagcacttaaa
gactttgggtacaagtctttcagaccagggcaggaacaggccatcatgagaattctatca
ggtctgtccacgctagtggtgctctctacgggcatgggcaagtctctgtgctaccagctg
cctgcctacctctatgcccagaggtcgaactgtatcactttggtggtgtcaccactggtg
tctcttatggatgatcagctttctggactcccatccaagctgaaagcggctgccattcac
tccaatatgtctaaaaaacagcgagaggttgccattgagaaggttaaggcaggtgaggtc
catgtcctgctcctgtcccctgaggcgttggtaggtggaggtcactctggctctggctgt
cttcccccagctgaccagctccccccggtggccttcgcctgtatcgacgaggcccactgt
gtctcagagtggtcacacaactttaggccctgctacctgcgtctctgcaaggtgttgagg
gaccgtctgggcgtgcgttgcctgttgggtctgactgccaccgccaccctgtccacagcc
ctggacatcgctcaaaacctgggcatcactgaccaggacggtgttgctgtccgctcagcc
gccgtgcctaacaacctgcagctgtctgtctccatggaccgagacaaggaccaggccctg
gtgtgtctgctgaagggagagcggtttgggtctctggagtccgtcatcatctactgcacc
aggagagaggagacgacccgtatatctgccctgctcaggacctgcttgcagggggtgctg
ttgaaggagtctaaccgtacagctaatcaggaggcagatgacaaccctgtagggaagaag
aagaaagctttggccaggaagaagatccgtaagcctctgaagtggatggctgagtcctac
catgccggcatgtcgtcctctgagcgccgtcgcgtccagaacaacttcatgtgtggtgag
ctgcgagtggtggtcgccacggtagccttcggcatgggcctggacaagtcggacgtgcgc
ggaatcgtgcactacaacatgcccaagagctttgagagctacgtgcaggagatcgggagg
gcagggagagatggggaaccggcccactgtcatctcttcctggatcctgagggaggggac
ctgcatgagttgcggaggcacatctatgccgatacagtggactactacactgtgaagaag
ctggtgcagaaggtgtttcctccctgcaggtgcagacagatccaccagaaccagcaggac
ctagccaggactcaggaggaggttgatgactccgagatgatggaactgatggacacctgt
gatgagaacccagttgaaacaccggaacacacaacagagactggtcagaacacccccatc
gagcagttggaacaggtcaaagttcctactgaggatgtatcaacttttcaaccactggac
ggggagcagaaacacccaccagagtcaagtgttccatttccccagagaggggatggcgaa
catgaagaggaggagcagatagggggaggtgatgatttgcccacgactagggtgtgtcac
acccatgagagggccatacctatgcaggacactgtggaagccctggacatcactgaggaa
ggtttggagactctgctgtgctatctggagctgcaccctcagcagtgggtagagctgctc
caccccaccctctccacctgtaagatggtctgttacaacggcccgcatcaactccgcaaa
ctcaccaaaatctgcccacctgttgccgtagtgttagcccgaaaacggctggcaggggag
cgagtggacacctgtgattcggtcgactttgatgtggtggaggtggcagacactatgggc
tggcagctgggtctggtgaagagaggcctccgacaactacagtgggccacaaacagagga
gtcttggtggagttctccaacctgtccttctacttccgttcctacggtgatttgaccccg
gatgagatggaccaggtgtgtgagttcctgcatggcagggtggtggcccaggagaggacc
aaactgtaccagctcaaagcctgcttcaaggccttccgcagcgttgcattcaagagctgc
agtgtctgtacggacaagctggacgagagcagaagcctgaagctgaaagggcttctgggg
gattactttgataagaggagagaactggacctgagcaggaagttccaggaggagaaggat
ggcgaggacgaggaggaggagttgttgaaatgcaagatgaaggacttcgagggtcagatc
agagcagatattcagagtttcctgggcaaccgcagtgatgagaagttctctggcagagcc
gtcgctagaatattctttggaattgggagtccatgttacccagctcagaccttcggcagg
gacaagagatactggagaaaatacatccaatttgattttaatgaaatcatccgctttgct
attcaggagatcattcgattcaagtga
DBGET
integrated database retrieval system
