Oncorhynchus tshawytscha (Chinook salmon): 112265811
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Entry
112265811 CDS
T05605
Name
(RefSeq) DNA-binding protein SATB1-like
KO
K23225
DNA-binding protein SATB1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112265811
03036 Chromosome and associated proteins [BR:
otw03036
]
112265811
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
112265811
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112265811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ULD
CUTL
CUT
MAP6
Motif
Other DBs
NCBI-GeneID:
112265811
NCBI-ProteinID:
XP_042151192
LinkDB
All DBs
Position
LG13:17106797..17129008
Genome browser
AA seq
1104 aa
AA seq
DB search
MDPQQCDGGHVSEGCNTPGNRDHRPPPAKLVRLELNGGGGPSGPHQGRMRQGSPGVRTSA
PKLTPPAPQPKNWHKRGSLLPVLCLVEHRESPVLAVEAERREEHAEFVLVRRDLLFNQLI
EMALLALGYTHSSAAQAKGSIQVGRWNPVPLSCVTDAPDATVADMLQDLYHVTTLKIQLT
SCPMLEDLPPEQWSHSTVRNALKELLRDMNQSSLAKECPLSQSMISSIVNSTYYANVSAS
KCHEFGHWYKHFMNTKGIMEIDSFSDQSQTSSTHPSTKQSFPGSTAEQVCSSPLPFPHGG
ATHTSGRSCLAPSLCPPGLVTAPLSPQLVSPQQIVMAQFLNQQYAVSHMLAQQSLSVSGL
DPPPQAGPPGPGSGSQSQVCGPSDISCEIYQWVREELKRAGISQAVFARVAFNRTQGLLS
EILRKEEDPKSASQSLLVNLRSMQSFLQIPEGDRDRIYQEERERSLTTWTIINHSPNNTT
TPRHTQTRKEEGNFVKAEDWPSQVSIVFPKVRLSPVAVVNRGAKSEGCVLDRGLKSEGCV
LDRGVKSVGCVLDRGVKNVGCVLDRGVKSVGCVLDRGVKSEGCVLDRGVKNVGCVLDRGV
KSEGCVLDRGLKSEGCVLDRGVKNVGCVLDRGVKSVGCVLDRGVKSEGCVLDRGVKNVGC
VLDRGVKNVGCVLDRGVKSEGCVLDRGVKSEGCVLDRGVKSEGCVLDRGVKSEGCVLDIN
SSIYEEIQQEMKRAKVSQAMFAKMAASKSQGWLCELLRWKEDPSPENRTLWENLCMIRRF
LSLAQMERDAIYEQESNTLQQHCTDRLTQLVNNNTLLQRHSPLQQQHHQRTLTALSQLPL
QPQAEPRLPPRQPSTASPAETEGGRRQLRTWWGSSQGDGREEDITGRGCRGWGQGRVRGV
YNNDKEGGVGRWAGGRQTNGEVDGGSDGEGFRVSREAQGILQSFIQDVGLNPDEEAVHTL
SAQLGLPKHTILSFFHSQHHSYTHQNHRQYYSEIQHNQHPSQDHNHRENHNQHHTDQDQL
FYNGAGPTQPKRTTGEEWTVDLAGQMGVGGEDMDREEEIEGKGEEDAILKELDVSSQTNA
VATLEEEQHDSNQSETAQPHDSDE
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggacccccagcagtgtgatggaggccatgtgtcagaggggtgtaacactcctggtaat
agggaccaccggccccctcctgccaaactggtccgcctggagttgaacggtggcgggggc
ccctcaggtccacaccagggcaggatgagacaggggagcccaggggtcagaacttcggcc
cccaaactcaccccacccgcaccacaacccaagaactggcataaaagaggaagcctgctg
cctgtgctgtgtttggtggagcacagagagagcccagtcctggcagtggaggctgagagg
agagaggagcatgcagagtttgtactggtcaggagagacctgctgtttaaccagctgata
gagatggctttactggccctgggctacactcatagctcagcagcacaggccaaaggttcg
atccaggtgggtaggtggaaccctgtccctctgtcctgtgtgactgatgctcctgatgcc
acagtggctgacatgctgcaggacctctaccatgtgaccaccctcaagatccagctcacc
agttgtcccatgttggaggacctccctccagaacagtggagtcactccacagtgagaaac
gccctgaaggagctattgagagacatgaaccagagctcactggccaaagagtgccctctg
tcccagagtatgatctcctccattgttaacagcacctactatgcaaatgtgtcggcctcc
aagtgccacgagtttggccattggtataagcacttcatgaataccaaaggcatcatggag
attgacagcttctctgaccaatcccaaacgagctccacacacccatcaaccaaacaatca
ttcccaggcagcacagccgagcaggtctgctcctcacccctcccctttcctcacgggggt
gccacccacacttctgggcgtagttgtctggccccaagtctctgccccccggggctggtg
accgcccccctcagcccccagctagtcagcccccaacagatagtcatggcccagttcctc
aaccagcagtatgcagtcagccatatgctagcccagcaaagcctgtctgtatctggcctc
gacccccctccccaggctggaccaccaggacccgggtctgggtcccagagccaggtgtgt
ggaccatcagacatctcatgtgagatctaccagtgggtgagagaggagctgaagagagca
ggcatctcccaggctgtgtttgcccgtgtggccttcaacaggacccagggcctgctgtct
gagatcctgcgtaaggaggaggatcctaagagtgcgtctcagtctctcctggtcaacctg
cggtccatgcagagtttcctacagataccggaaggtgaccgcgaccgtatctaccaggag
gagagagagaggagtctgaccacgtggaccattatcaaccattcacccaacaacactacc
acacctcgccacacacagaccagaaaggaagagggaaactttgttaaggctgaagattgg
ccctcccaggtttccattgtatttcctaaagtgaggctgtctccagtagcagtagtaaac
agaggggcgaagagcgagggatgtgttctagacagagggttgaagagcgagggatgtgtt
ctagacagaggggtgaagagcgtgggatgtgttctagacagaggggtgaagaacgtggga
tgtgttctagacagaggggtgaagagcgtgggatgtgttctagacagaggagtgaagagc
gagggatgtgttctagacagaggggtgaagaacgtgggatgtgttctagacagaggggtg
aagagcgagggatgtgttctagacagagggttgaagagcgagggatgtgttctagacaga
ggggtgaagaacgtgggatgtgttctagacagaggggtgaagagcgtgggatgtgttcta
gacagaggagtgaagagcgagggatgtgttctagacagaggggtgaagaacgtgggatgt
gttctagacagaggggtgaagaatgtgggatgtgttctagacagaggagtgaagagcgag
ggatgtgttctagacagaggagtgaagagcgagggatgtgttctagacagaggagtgaag
agcgagggatgtgttctagacagaggggtgaagagcgagggatgtgttctagacatcaac
agttctatctatgaggagatccaacaggagatgaagagagccaaggtttctcaggccatg
tttgccaagatggccgcgtccaagagtcagggctggctgtgtgagctgctgcgctggaag
gaggatccgtccccagagaaccgaaccctgtgggagaacctgtgtatgatccggcgcttc
ctgagtctagcccagatggaacgagacgccatctatgaacaggagagcaacactctgcaa
caacactgtacagacagactcacacagctagtcaacaacaacacactgctccaacgccac
tccccattgcaacaacaacaccatcaacgaacactgaccgctctgtcccagctgcccttg
cagccccaggcggagcctcgcctgccgccacgacaaccatccacagcatcaccggccgag
actgaggggggtaggcggcaactgaggacctggtggggaagtagtcagggtgatgggagg
gaagaggatattactggcaggggctgtaggggttggggccagggcagggttaggggtgtg
tataacaatgacaaggaagggggagtgggacggtgggcggggggcagacagactaacggc
gaggttgatggtgggagtgatggcgaggggtttcgggtgtcccgagaggcacaggggatc
ctgcagagcttcatccaggacgttggtctgaacccagacgaggaggctgtccacacactg
tcagcccagctgggcctgcccaaacacaccatcctcagcttctttcacagccagcaccac
agctacactcaccagaaccatagacagtactacagtgagatccaacacaaccaacatccg
agccaggaccacaaccacagagagaatcacaaccaacaccacacggaccaggaccagctc
ttctataatggagcaggcccaacccagcctaagagaactacaggggaggagtggactgta
gatctcgctggacaaatgggggtggggggggaggatatggaccgggaagaggaaatagag
gggaagggggaggaggacgccattttgaaagagttggatgtgagcagtcagactaacgct
gtcgccaccctagaggaggagcaacatgattctaaccaatctgagactgcccaaccacat
gactctgatgaataa
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