Oncorhynchus tshawytscha (Chinook salmon): 112265836
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Entry
112265836 CDS
T05605
Symbol
ahdc1
Name
(RefSeq) proteoglycan 4
KO
K22592
AT-hook DNA-binding motif-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112265836 (ahdc1)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
112265836 (ahdc1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
Motif
Other DBs
NCBI-GeneID:
112265836
NCBI-ProteinID:
XP_024299156
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Position
LG13:22814522..22829014
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AA seq
718 aa
AA seq
DB search
MSRLSGRLRSGGGGRVGCDGRAVVEEQGCEGSRVAFEGERAVGVQEEVTVEPSAEAGAQE
TLELLPSPSPPSLSNGLHLHRRPVLGTRRRRQTETHTLNDAPTHTPGQTFIGMQTHKDIQ
MQTPAETCMDAHTHTSAHRQMDAHTHLDSAGPEQPRTDSSPETHTRSPQRQVLLPLNHSA
CTNQQAAFSPCSPAPSRSANRDMPQAISPAPNISSTPLDLSKPSRATGPNPPGLSPIGPA
CPDLSTIGPAPVDPSPVPVEGERKYALRSSGRPRFPCQLRKSSRIRRCTEDGERRGGRES
EREEEEEEEKERVSVHVKVERPTVEECLSAAFKPAASKPAASPAPVPVAPLPSTHPSSRP
SSHSAPRPSPKPQHRTSTKPQPKSSTVAKPKSQPRPSMKASPKPLPRSATNPRPATNPLP
RPLTNTVPRPVVKKEEPGELDPLTKRKRRFVGVRRIVVKVARIPVNLSRRQKSYKISSME
TVEKGGAGSDGRLEGAEGGTAVVREPTALLRMKNNGKSVMVMFPPGELPVILKRRRGRPP
KQVVPGTPDKTTGGNGEPKKPRRRRRAKLPSPQPSYVNDTNDVKTEYGDVLSKLAFLNRQ
PPATGRCSPPRCWTPSEPDSFHTPSDNPGISALLHRLTGFRRRGGRGGGVGGRGGGAGGG
AGGAGGEGFKSSFSDFFETIGKKRKVTPALSEPGLLKKRGKGGGGRGGGAAGGDGGWG
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcctgtctggacgcctgcggtcggggggagggggtagggtagggtgcgacggc
agggccgtagtggaggagcaggggtgcgaggggtcgcgggtggcgtttgagggggaaagg
gctgtaggtgtacaggaggaggtcacagtggaacccagcgctgaggctggagctcaggag
acccttgaacttttaccctccccctcacccccctccctgtctaacggtcttcacctgcac
aggaggcctgtccttggaacacgcagacggaggcagacagagacacacacactcaacgac
gctccaacacacacacctggacagaccttcataggcatgcagacacacaaggacatccaa
atgcagacacctgcagagacgtgcatggacgctcacacacacacaagtgctcacagacaa
atggatgctcacacacacttggactctgccggtccagagcagcccagaactgactcatca
ccagagacacacaccagatcacctcagcgacaggtcctcctgcctctcaatcattcagcc
tgcaccaatcagcaagctgctttctctccctgcagccccgctccttcacgctctgcaaac
agagacatgccccaagccattagccctgcccctaatattagttcaacacctctagatctc
tctaaaccctcaagagctactggtccaaatcctccaggcctttctcctatcggtccagcc
tgtccagacctttctactattggtccagcccctgtagacccctcccctgtacctgtcgaa
ggtgagagaaagtatgcacttcgtagctccggtcgacctcgctttccctgccagctacgc
aagtcttcccgcatccgccgatgcactgaggatggagagaggaggggagggagggagagt
gagagggaggaggaagaggaagaggagaaagagagggtgagtgtacatgtgaaggtagag
cgccccacagtggaggagtgtctatctgcagccttcaagcctgcagcctccaagcctgca
gcctcacctgcaccagtacctgtagcaccactcccctcaacacacccctcatcacgcccc
tcctctcactccgccccccggccatcgcccaaaccccaacatagaacttcaaccaaaccc
caacccaaatcttcaaccgttgccaaaccaaaatcccaacccagaccatcaatgaaagcc
tcacccaaacctttgcccagatcagctaccaatcccagaccagcaaccaatcccttgcct
cgtccattgaccaatacagtgccccggccggtagtgaagaaggaggagcctggtgaacta
gatcccctcaccaaacggaaacgccggtttgttggtgtgaggcgtatcgtggtgaaggta
gctcgtatcccagtcaacctcagccgacgccagaagagctacaagatttcctccatggag
acagttgagaagggcggggcaggtagtgatggcaggttggaaggagccgagggggggaca
gcggtagtccgagagccgactgcgctcctccgtatgaagaacaacgggaagagtgtgatg
gtcatgttcccgcctggagaacttcctgtgatcctgaaacgtcgccgtggccgacctccc
aaacaggttgtacctggaacgccggataaaaccaccggtgggaatggtgagcccaagaaa
cctcgtcggcgccggcgggccaagctcccgtctccgcaaccgtcgtacgtgaatgacacc
aacgacgtgaagacggagtacggagacgttctgtccaaactggcattcctcaaccgccaa
ccgccggccactggccgctgctccccaccacgctgctggacacccagcgaaccggacagc
tttcacacgccgtccgacaaccctgggatctccgccctgctccaccgactcacagggttc
agacgcaggggaggcagggggggaggtgttggaggcaggggaggaggagcagggggagga
gcaggaggagccggcggagagggcttcaagagctccttcagtgacttttttgagacgatc
gggaagaaaaggaaagtgacccccgctctgtcagaaccagggttactcaagaaacgtggg
aagggtgggggaggcaggggaggaggggctgcagggggagatgggggttgggggtga
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