Oncorhynchus tshawytscha (Chinook salmon): 112265846
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Entry
112265846 CDS
T05605
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U-like isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112265846
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112265846
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112265846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
PTPlike_phytase
Ig_DSCAM-DSCAML_C
Y_phosphatase3
Pur_ac_phosph_N
SPG48
Motif
Other DBs
NCBI-GeneID:
112265846
NCBI-ProteinID:
XP_042151415
LinkDB
All DBs
Position
LG13:26566343..26841599
Genome browser
AA seq
1497 aa
AA seq
DB search
MYSGVILLMLVVGIYTDTMDQGPTAGCTFDEDSDPGLCEYKQGQEDDFDWQLMRTYNWPH
TSPDLLRGSFMMVNSSQHATGQRAHLLLHSLSENDTHCIQFSYFLYSRDGHSPGELQLYI
RVNGGPWGSAVWNVSGSHGRQWHQVELAVSTFWPSEYQVVFEASVSAERRGYIAIDDILL
LNYPCYKVPHFSRLGDVEVNAGQNATFQCVATGKTTETEPFLLERRNGVVVAASSIQRLS
HKRLMATFQVEAERGEQDLYRCITESARGAAVSNFAELIVRVPPTPIAPPQLLRAGPTYL
IIQLNTNSIVGDGPVIRREIEYRASQSPWSETHGVGSLTYKVWHLEPDTEYRISVLLTRP
GDGGTGAPGPPLVSRTKCAEPMRALRGLTAIEIQPRQLVLQWEPLGYNLTRCHTYSVSLC
YRYSTPAGGSAGNNATVRECLSVERNQSHFTLRDLPPFRSVHVRLALENPEGKKEGREVT
FQTEEDIPGGIVPESLTFTPLDDMIFLKWEEPVEPNGVITQYEISYQGIESSDPGINVPG
PRRTVSKLRNETYHMFSGLHPGTTYLVSVRARTAKGFGQTALTEITTNISAPVFDYEDVP
APLSESESTITVLLRPALGRGAPVSAYQVVVVEEDGSRRIRRRRRRRELGSGSDCFPVPA
SQVEAQSKGMPHYYTAELPPSSLPEATPFTVGDNHTYNGYWNTPLDPSKNYLVFFQAISN
FRGETRINCIRIARKAACKDHKRALEVSQHAEDMGLILGACAGGLVVLILLLGAIVIIIK
KGRDFYSYSYYPRKKVALNKAAMSYRQEKTRKLGSLDCSMTEQSTLQQDGRTANSFMDAH
TCNTRNEQRSSVNESSSLLGGSPRRHCRRKSSPYHTGQLHPAVRVADLLQHINQMKTGEG
YGFKQEYESFFDGWDVTKKKDKTKGRHDSLLGHDRHRVKLHSLLADPNSDYGNANYIDLL
LKLRLSHMISCGNQRYCRVTYDIRINREGYQRSNHFIATQGPKQEMIYDFWRMVWQENCF
SIVMITKLVEVGRMKCCKYWPEDSELYGDIKITLLKTETLAEYTVRTFAMERRGYPAKHE
VCQFHFTSWPEHGVPYHATGLLAFLRRVKASTPPDAGPVVVHCSMGAGRTGCYIVLDVML
DMAECEGVVDIYNCVKTLCSRRINMIQTEEQYVFIHDAILEACLCGETAIPVLEFALTYK
EMLRVDSQSNTSQLREEFQTLNSVTPHLDVEECSVSLLPRNREKNRSMDVLPPDRALAFL
VTTEGIAEGNNYINAALTDSFHRPAAFVVTPHPLPGTTADFWRLVYDYGCTSVVMLNQIN
QSNSAWVRRGEPCLKYWPEPGLQQFGPMTVELLSMTADDDVIIRLFRVQNIMRLQEGQLV
VRHFQFLRWSPYRDVPDSKKAFLSLLAQVHNWQRECGEGRTIVHCLNGGGRSGTFCACTM
LLEMIRHHSLVDVFYAAKTLRNSKPNMVETMEQYRFCYDLALEYLDALDCLSEIEVR
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcggagtgattctactgatgctggtcgtcgggatctacactgatactatggac
caagggccaacagctggctgtacctttgacgaggactccgaccctgggctgtgtgagtac
aagcagggacaggaggacgactttgactggcagctgatgaggacatacaactggccacac
acctccccagacctgctgcgaggctcgttcatgatggtgaactcgtcccagcatgccacg
gggcagcgggcccacctcctcctccattcgctgagtgagaacgacacgcactgcatccag
ttcagctacttcctgtacagccgcgacggccactcccccggggagctgcagctctacatc
cgggtcaatggggggccgtggggcagtgccgtgtggaacgtctccgggtcacatggacgc
cagtggcaccaggtggagctagccgtcagcacattctggcccagtgaataccaggtggtg
tttgaagcatcggtctcagcagaacggcgaggctacatcgccattgacgacatcctgctg
ctcaattacccctgctacaaggttccccacttctctcggctgggggatgtggaggtcaat
gcagggcagaatgccaccttccagtgtgtcgccacgggcaaaactacagagacagaaccc
ttcctactggagcgtcgtaacggtgtggttgtggcggcgtcctctatccagcgtctgagc
cacaagcgtctcatggccaccttccaagtggaggctgagagaggggagcaggacctgtat
cgctgcatcacagagtccgcacggggagctgccgtgtccaacttcgccgagctcattgtc
agagtgccccccacccccatcgctcccccccagctgctccgggctggtcccacctacctg
atcattcaactcaacaccaactccatcgtgggggatggccctgttatccgccgtgagatc
gagtaccgggccagccaatcaccatggtcggagacacatggtgtgggctcgctcacgtat
aaggtgtggcatctggagccggacacagagtaccgtatcagtgttttactgacccgacca
ggggatggaggcacaggggcgcctggacctcccctggtcagcaggaccaagtgtgcagag
cccatgcgtgcgttgcgaggcctcacagccatagagatccagcctcgtcaactagtctta
cagtgggaacctctgggctacaacctgacgcgctgccacacctactctgtctctctctgc
taccgttactccacacctgcagggggcagcgcagggaacaatgccacagtgagggagtgt
ctctctgtagagaggaaccaatcacacttcaccctgagggacctgcccccgttccgctcc
gtccacgtccggctggccctggaaaatccagaaggcaagaaagaaggcagagaggtcacc
tttcagactgaggaggacattcctggtggcatcgtcccagagtcactaactttcacccca
ttagacgatatgatctttctgaagtgggaggagcctgtggagcccaatggggtcatcaca
cagtatgagatcagttaccagggcatcgagtcatccgacccgggtatcaacgtaccgggc
cctcgccgtactgtctccaagctgaggaacgagacataccacatgttctctggtctacac
cccggcaccacctacctggtgtctgttagagctcgcaccgccaagggcttcgggcagacc
gccctcactgagatcaccaccaacatctccgccccagtgtttgactatgaggatgtccca
gccccactcagtgagtcagagagtaccatcactgtgctgctgagacctgcactgggcaga
ggagcaccagtcagtgcataccaggtggtggtagtagaagaggacggttctaggcggatc
aggaggaggaggaggaggagggagctgggtagcggttcagactgtttccctgtgccagcg
tcccaggtggaggcccagtctaaggggatgcctcactactacacagctgagctacccccc
tccagtctccctgaggccactccgttcaccgtaggggacaaccacacctataacggctac
tggaacactcccctggacccctccaagaactacctagtcttcttccaggctataagcaac
ttcagaggggagacaagaattaactgcatccggattgcccgtaaagctgcctgtaaggac
cataagagggccctggaggtgtcccaacatgcagaggacatgggtctgatcctgggggcc
tgtgctggcggactggtggtcctcattctgctgctgggggccatcgttatcatcatcaag
aagggaagggacttctattcttactcttactaccccaggaagaaggtagcgctgaacaag
gcagccatgtcgtaccgtcaggagaagaccaggaagctaggttctctggactgcagcatg
acagagcagagcaccctgcagcaggatgggcgcactgctaactccttcatggacgcccac
acctgcaacacacggaacgaacagaggagttcagtgaacgagtccagcagcctgttgggt
ggttcccctcgacgccactgtcgtaggaagagctctccgtaccacacgggtcaacttcac
cccgcggtcagggtggcagacctcctccaacacatcaaccagatgaagactggggaggga
tacggcttcaaacaggagtatgagagcttctttgatggatgggatgtcaccaagaagaag
gacaagactaaagggagacatgacagtttgctggggcatgatcgtcatcgagtcaagcta
cactctctcctagcagaccccaactctgactatggcaatgccaactacatagacttgctc
cttaaactgagactcagccatatgatcagctgtgggaaccaaagatattgcagagtgact
tacgatatccggataaacagggaagggtaccagcgatcaaaccacttcatagccacccaa
ggtcccaagcaggagatgatctatgacttctggaggatggtgtggcaggagaattgcttc
agtattgtcatgatcactaaactggtggaggtgggcaggatgaagtgctgtaagtattgg
cccgaggacagtgaactctatggagacatcaagatcacactgctgaagacggaaacactg
gccgagtacaccgtccgcacctttgctatggagcggaggggctacccagcgaaacatgag
gtatgtcagttccacttcacctcctggccagagcatggtgttccctaccacgccacaggc
ctgctggccttcctacgccgggtcaaggcctccacaccccccgatgctgggcccgtggtc
gtccactgcagtatgggagcaggcagaacaggctgctacatcgtactggacgtcatgctg
gatatggcagagtgtgagggagtggtggacatctacaactgtgtcaagaccctctgctcc
agacgcatcaacatgatacagacagaggagcagtatgtgttcatccacgatgccattctg
gaggcctgtttgtgtggagagacagctatacctgttcttgagtttgctctgacctataag
gagatgctgagggttgactcacagagcaacacctcccagctacgagaggagttccagacg
ttgaactctgtgacccctcacctggacgtggaggagtgcagcgtatccctgttgccgagg
aaccgcgagaagaaccgtagcatggacgtcctgccccccgaccgcgccctggccttcctg
gtcaccactgagggcattgccgagggcaacaactacatcaacgccgctctcactgacagc
ttccaccggcccgccgccttcgtggtcacacctcacccgttaccgggaaccacggcagac
ttctggaggcttgtctatgactatggatgtacctcggtggtgatgctcaaccagatcaac
cagtccaactctgcctgggtgagaagaggggagccatgtctaaagtactggccagagcct
gggctgcagcagtttggaccaatgacagtggagctgctgtccatgacggctgatgatgac
gtcatcattcgtttgttccgggttcagaacatcatgcggctccaggaaggtcagctggtg
gttcgtcatttccagttcctgcgctggtctccataccgtgacgtcccagactctaagaag
gctttcctcagcctcctggctcaggtccacaactggcagagggagtgtggagagggacgt
accatcgtccactgtcttaacggtggtggtaggagtggtacgttctgtgcttgtaccatg
ctgctagagatgatccgtcatcacagcctggtggatgtcttctacgctgccaagacgcta
cgcaactccaaacccaacatggtggagaccatggagcagtaccggttctgctatgacctg
gccttggagtacctggacgccttggactgcctgagtgagatagaagtgagatag
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integrated database retrieval system
