Oncorhynchus tshawytscha (Chinook salmon): 112265861
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Entry
112265861 CDS
T05605
Symbol
pex6
Name
(RefSeq) peroxisome assembly factor 2
KO
K13339
peroxin-6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112265861 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265861 (pex6)
Membrane trafficking [BR:
otw04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
112265861 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_33
AAA_22
AAA_5
ABC_tran
DUF815
RuvB_N
nSTAND3
TIP49
Mg_chelatase
RNA_helicase
TsaE
AAA_7
AAA_25
AAA_24
NPHP3_N
Vps4_C
AAA_28
IstB_IS21
AAA_14
AAA_2
Parvo_NS1
AAA_17
PhoH
Wza_C
Motif
Other DBs
NCBI-GeneID:
112265861
NCBI-ProteinID:
XP_024299175
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All DBs
Position
LG02:59607945..59623592
Genome browser
AA seq
1089 aa
AA seq
DB search
MAAQVELSCLDTFPTHLNPLHVLVIKSQFRYAFPSCNEPTSTLLFTSRKLQTLGKTAVLL
CAHSTEETSGWGSDGNDTTLKLYTSKIFLKHYGLQDDIRGVVRSLSPFSLRKVVIGARTR
QSFKWANSDKFSNGLLVLASCQGQPLLARQGDSLSLPYHPLLGDDISQVQHSLFDLVVLE
CTPITQGMITINTTVVVTDCRDIAQHGALETSNALATRNLTSLFVSDFAHYANSLGGGSS
LLDNRQVLDSSLSAFLQALECRLDVRIVDIRRLYGQGRIVLVEKGDAKIDLDSTVFVSKQ
LLLKLGLFNREWVVVSRFNCSSEMTKTSYRGESLPSPGQADENAPGKEPSKGTEMVHLGS
VVVADFSKCAELDLQDNVGFISPTHWFNLSNGEPVPVSSRAVKIKRWNRVVSQSGLQLSE
SLSRSASPLLAKELHIDAVISPEYSSHGPFDSILCEHFTIPRLVQLGGVLGIPSEGHPEV
LESNSEGITRWPVVYFKVKKVCGSTEEEDQGPYLADTVHTSLYMGGSTNSLAPCSLVGEE
PSLWTSLSPPGLSSTVDQFSTIIQPHMNESSAALMSGCTILLLGPSGSGKFTSVRAACRR
LHLHLVKVDCVTLCADTAASCEAKMKSVFQRAEAHRPCILLLRNLQLLGQPRDGAEEDAR
VIAALCQFIAHAPASVVVVAAVSKPRELSSDVMAAFIHQVSIESPSEEQRRAMLASLSEC
VPLGKDVNLARLAKHTAGFLLGDLSALLTQAGKSAHARILQSCFPEGASVQEEEDLCACG
VTVLAQDFTNALETLQDAHSQAIGAPKIPSVRWQDVGGLQQVKREILDTVQLPLERPELL
SLGLRRAGLLLYGPPGTGKTLLAKAVATECSMTFLSVKGPELINMYVGQSEENVREVFSK
ARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRP
DLLDQSLLRPGRFDKLVYVGINEDKESQLQVLKAVVRKFKVDPSVSLQDIVERCPPQLTG
ADIYALCSDAMMSAIKRKIARVTDGLDTEDTLLILSAEDFNQALDCLKPSVSEQELFKYK
LIQQKLTAK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaggtagaactgtcatgtttagatacatttccaacgcacttaaatccttta
cacgtgcttgttatcaagtcacaatttagatatgcgtttccaagttgcaatgagcctact
tcgacccttttattcacctcacggaagcttcagacactcgggaaaactgccgttttgctc
tgcgcgcactcaacagaggagacgtcaggttggggatcggatggaaacgacacaacttta
aaattgtacacaagtaagatctttctcaaacactatggtctccaggatgatataagggga
gttgtacgctcactatcaccgttttcccttcgaaaagttgttataggggcacgaacaaga
cagagtttcaagtgggcaaactcggataagttttccaatggacttctcgtactggcttcg
tgccaaggtcaaccactattggcacgacaaggggactcgctatcacttccctatcaccct
ttacttggagatgatatatctcaagtgcaacactctctgttcgacttagttgtgttggag
tgtacacctataacgcaggggatgataacaatcaacacaacagtggtggtcactgactgc
cgagacattgcgcaacatggtgcactggagacctcgaatgctttggctactagaaatttg
acctcgctatttgtctctgattttgcacactacgcgaatagtcttggcgggggaagctct
ttacttgacaacaggcaagtattggactcgagtttatccgcttttttgcaagcactggag
tgtaggctggatgtcagaatcgtggatattcgtcgcttgtacggtcaagggagaattgta
ctagtggagaagggcgatgctaaaatcgatttagacagtactgttttcgtaagcaaacag
ttgctgctcaaactcgggttattcaaccgtgagtgggtagtggtgtctaggtttaactgc
tcatcagaaatgacaaagacgtcctacagaggcgagtccctgccaagtcccgggcaagcc
gatgaaaacgcacctggcaaagagccatctaagggcaccgaaatggtccacctcggctcg
gttgttgtggcagatttcagcaagtgtgcagagttggaccttcaagacaacgttggcttc
atatcgccgactcattggttcaacttgtcgaacggagagccggtgccagtcagtagcaga
gctgtgaaaataaagagatggaaccgggtcgtttctcagtcaggtcttcagctttctgag
agcctctctcgatcagcatcaccgctgttagccaaagaactccacattgatgctgtcatc
tccccagaatacagttctcatggtccctttgacagtatcctctgtgagcactttaccata
ccaagacttgtgcagctgggcggtgttttgggcatcccatctgaagggcatcctgaagtc
ttggagagcaactctgagggaatcacaaggtggccggttgtgtatttcaaagtgaaaaag
gtttgtggctctacagaggaggaagaccaaggtccttaccttgcagacactgtccacaca
tctctatacatgggcggctccacaaatagcctggctccctgttcccttgttggcgaggag
ccttccctctggactagcctgtctccccctgggctctccagcaccgtggaccaattctcc
actatcatccagccccacatgaatgaaagctctgctgctctgatgagcggctgcaccatc
ctcctcctgggaccgagtggcagtggaaaattcacctctgtcagagctgcatgccgtaga
ctccatctgcacttagtgaaggtggactgcgtgaccctctgtgccgacacagccgcctcc
tgtgaggcgaagatgaagtctgtcttccagcgagctgaggcccaccggccgtgcatcctg
ctgctcaggaacctgcagttgctgggccagcccagggatggcgccgaggaggatgccagg
gtcatagccgccctgtgccagttcattgcccacgcccctgccagcgtggtcgtggtggcg
gcggtaagtaaaccccgggagctgtcgtctgacgtgatggcagccttcatccaccaggtg
tcgatagagagccccagtgaggagcagcgccgggccatgctggccagcctcagcgagtgc
gtgcccctgggaaaggacgtcaacctggccaggctggccaagcacactgcgggctttcta
ttgggggacctcagtgcactgctgactcaggctggtaaatctgcccacgcaaggatactc
caatcctgtttcccagagggggccagtgtgcaggaggaagaggacctctgtgcctgtggg
gtaaccgtcctggcccaggacttcaccaatgccttggagaccctccaagacgcccactct
caggccatcggagccccgaagatccccagtgtgcgctggcaggacgttggcggcctgcag
caggtgaagcgggagatcctggacacggtgcagctgcccctggagaggcccgagctgctg
tccctgggcctgcgccgcgccggcctgctcctctatgggcctcccggcacgggcaagacc
ctgctggccaaggctgtggctacagagtgctccatgaccttcctcagtgtcaaaggcccg
gaactcatcaacatgtacgtgggtcaaagcgaggagaacgtgagagaggttttctctaaa
gctcgagcggcggccccttgtatcatcttctttgacgagctggactctctagcacccaac
agagggcgcagtggagactctggtggagtcatggacagggtggtctctcagctcctggct
gagcttgacggacttcactcctctggggacgtgtttgtgattggagccaccaaccggcca
gacctgcttgatcaatcattgctcagacctggcaggtttgacaaattggtgtatgttggg
atcaatgaagacaaagagtctcagctgcaagttctgaaggccgtagtcagaaagttcaag
gtggaccccagcgtcagtctccaggatatagttgaacgctgccctcctcagctcacaggg
gcggacatatatgctctctgctctgacgccatgatgtctgccattaagaggaagattgca
cgtgtcaccgacggtctggacaccgaggatactcttctcatactctctgccgaagacttt
aaccaagcattggattgcctcaaaccgtccgtctctgaacaagagctgttcaaatataaa
ctcattcagcagaaactcactgcaaaataa
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