Oncorhynchus tshawytscha (Chinook salmon): 112265943
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Entry
112265943 CDS
T05605
Symbol
slc8a1a
Name
(RefSeq) sodium/calcium exchanger 1a isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
otw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112265943 (slc8a1a)
04020 Calcium signaling pathway
112265943 (slc8a1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112265943 (slc8a1a)
04261 Adrenergic signaling in cardiomyocytes
112265943 (slc8a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112265943 (slc8a1a)
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112265943 (slc8a1a)
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
112265943 (slc8a1a)
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Others
112265943 (slc8a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
112265943
NCBI-ProteinID:
XP_024299227
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All DBs
Position
LG02:complement(59339167..59383038)
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AA seq
973 aa
AA seq
DB search
MGQTGTSSFLFCTLQLTVLLAVFSSEITFVTAVNSNPSLGTNSSIGNQTYKKCDSVGTEC
KVGVILPIWLPENPSFGDKLARATVYFVALFYMFLGVSIIADRFMASIEVITSQEREITI
KKPNGEKVTTTVHVWNETVSNLTLMALGSSAPEILLSVVEVCGHNFDAGDLGPNTIVGSA
AFNMFVIIGLCVSVIPDGEHRKVKHLRVFFVTATWSIFAYTWLYLILAVISPGIVQVWEG
LVTLFFFPLCVGMAYVADRRLLVYKYMYKRYRAGKRRGVIIETEGEAQLPSKMDIEMDGK
MLNSEGFMDVAMGFDEKDLDEEEARKEMARILKELKQKHPEKETEQLIELANYQVLTQQQ
KSRAFYRCQATRIMTGAGNVLKKHAADQARKAVGAYEIRSEVSENDFSSKIFFDPCTYQC
LENCGTVALNVVRLGGDLTNTVSVEYRTEDGTANAGSDYQFTEGVVVFKPGETEKEIRID
IIDDDIFEEDEHFLVHLSNVKVISDGTGYGQPRANHVDTLAGLGLPCSATVTIFDDDHAG
IFTFEEPVMTVSESIGMMEVKVLRTSGARGLVVVPYKTIEGTAKGGGEDFEDMHGALEFQ
NDEIFKTIQINIIDDEEYEKNKNFFLEMGEPQLLEMSERKAVLLQEIGGFVKTDKRLYGR
DVYRKVQGRDNPVPATIISIAEEGDEEALSKKEEEERRIAEMGRPTLGEHVKLEVVIEES
YEFKNTVDKLIKKTNLALLIGTNSWRQQFMEAITVSSGDDDEDECGEEKLPSCFDYVMHF
LTVFWKLLFAFVPPTDYWNGWACFVVSISMIGLLTAFIGDLASHFGCTVGLKDSVTAVVF
VALGTSVPDTFASKVAAIQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHNSKGNDF
RVDPGTLAFSVTLFTIFAFVAVAVLMYRRRPEIGGELGGPRGPKIATTCLFFSLWLMYIV
FSSLEAYCHIKGF
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaactgggacatcatctttcctcttctgcactcttcaactcacagtgttgttg
gcagttttttcatctgaaattacatttgttacagcggtgaattcaaacccaagcctcgga
acaaactcttccattggcaaccagacttacaagaagtgtgattcagtgggtactgaatgc
aaagtgggtgtcattctgcccatatggttaccagagaacccatcctttggagataaactg
gcaagagccacagtttactttgtggccttgttttacatgttcctgggggtctctatcatt
gcggatcgcttcatggcatccatcgaggtaattacatcacaagagagggagatcaccatc
aagaaaccaaatggtgaaaaagtgacaaccactgtgcatgtatggaacgagacagtgtcc
aacctgacccttatggccctgggttcctccgccccggagatcctactgtccgtcgttgag
gtgtgcggtcacaactttgacgcaggtgatctgggcccgaacaccatcgttggtagtgct
gccttcaacatgttcgttatcattggactctgtgtttctgtcattcccgatggagagcac
cggaaagtcaaacatttgagggtattttttgttaccgccacctggagtatattcgcgtac
acctggctttatctcatcttggctgtcatctcaccgggcatcgtacaggtgtgggagggc
cttgtcacactgttttttttcccgttgtgtgtagggatggcttatgttgcggatcgcaga
cttcttgtctataagtacatgtacaagcgctaccgcgcagggaagcgaaggggggtgatc
attgagacggaaggggaggctcaacttccttcaaagatggacattgaaatggatgggaaa
atgctcaactcagagggcttcatggacgtagcgatgggttttgatgagaaggacctggat
gaggaggaggccaggaaggaaatggcccggatcctgaaggaactgaagcagaagcatcca
gagaaggagacggagcagctgatagaactcgccaactaccaggtattgacacaacagcaa
aagagtcgcgccttctaccgatgccaggctaccaggatcatgacgggagcagggaatgta
ctgaagaagcatgcagcagaccaagccaggaaagctgttggtgcgtacgagatccgctcc
gaagtttcggagaatgacttttcgtcaaagatcttctttgacccctgtacataccagtgc
ttggagaactgcggtacagtggccttgaatgtagtacgccttggtggggacttgactaac
actgtttcagtggaataccgtaccgaagacggcacagccaatgccggctcggactaccag
ttcactgagggcgttgtggtgttcaaacctggtgagactgagaaggagatccggatagac
atcattgatgatgacatctttgaggaggatgagcattttctggtccaccttagcaatgtg
aaggtcatatccgatggcactggctacggacaaccaagggctaatcacgtggacactttg
gcgggccttggcctgccctgctcagccactgtgactatctttgacgatgaccatgccggg
atctttacttttgaagaaccggtaatgaccgtgagcgagagtattggcatgatggaagta
aaggttcttcgtacctcaggagcgcggggactagtggtcgtaccctacaagaccattgag
ggtacagcaaaaggagggggagaagactttgaagatatgcacggagcactggaattccag
aacgatgagatcttcaaaactatacagatcaatataatcgatgacgaggaatatgagaaa
aacaagaacttcttccttgagatgggagagcctcagctgctggagatgagtgagaggaaa
gctgtgttgcttcaagaaattggtggattcgtgaagacagacaaaaggctttatggcagg
gacgtctaccggaaagtgcagggtagggataaccctgtccccgccaccattatcagcatt
gcagaggaaggggacgaggaagctctctccaagaaggaggaggaggaacgccgcatcgct
gagatgggccggcctaccctcggggagcacgtcaaactggaagttgtcatcgaggagtcg
tatgagttcaagaacacagtggataagctgattaagaagaccaacttggctctattgatt
ggaaccaatagctggaggcagcagtttatggaagctatcacagtcagctctggcgatgat
gatgaggacgagtgcggcgaggagaagctgccctcctgctttgattacgtcatgcacttt
ctcaccgtcttctggaagctgctgtttgcctttgtgccgcccaccgactactggaacggc
tgggcctgcttcgtggtctccatcagtatgattggcctgctcaccgccttcattggagac
ctggcctcccactttggctgtaccgtgggcctcaaggactccgtgaccgccgtggtgttt
gtggcgctcgggacgtctgtgccagacacgtttgccagcaaggtagctgcaatccaggac
cagtacgccgacgcctcaatcggcaacgtaacgggcagcaatgccgtcaacgtcttcttg
gggatcggcgtggcctggtccatcgccgccatctaccacaattccaagggaaacgacttc
cgggtggatccgggcaccctggccttctccgtcaccctattcaccatcttcgcctttgtc
gccgtggccgtgctgatgtaccggcgccggcctgagattgggggcgagctgggtgggccc
cggggccccaaaatcgcaaccacctgtctcttcttcagcctgtggctcatgtacatcgta
ttctcctccctggaagcttattgccacatcaagggcttctaa
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