Oncorhynchus tshawytscha (Chinook salmon): 112266006
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Entry
112266006 CDS
T05605
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 3-like
KO
K22654
immunoglobulin superfamily DCC subclass member 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112266006
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
PUNC
112266006
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Sp38
Ig_C17orf99
Adeno_E3_CR2
Pur_ac_phosph_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
112266006
NCBI-ProteinID:
XP_024299277
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All DBs
Position
LG13:30717372..30739009
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AA seq
710 aa
AA seq
DB search
MDLGERERPSRGVKVGQGFLSLFAHKKMKKMGKTCRVSGVNFERGMGYRGHRTGNLVYEW
IRDRQGSSHDMLSAPVQNVCGAKELAFLLEPSDVIAVRDRPLMLDCRVEGEGTISITWRR
NGVPVVVEERVQVLPNGTLFIQSFQKRLERGGSETDVGEYDCAAQNRFGMLVSRKARVQL
AFLPKFHTHPESMSVDDGGVARFKCQVNSVPEANITWERDRNPLSTTDNRYTLLPMGVLQ
VTGVRRIDAGVYRCVASNIANTRFSHEAVLNVTGGASRIYKEPVILSGPQNLTITVHQTA
ILECIATGNPRPIVSWSRLDGRSIGVEGIQVLGTGNLMISDVSLEHSGVYVCAANRPGTR
MRRTALGRLVVQAPPEFMQWPQSVSKPAGGSAVFTCVAQGVPEPHLIWLKNGKILMPSDN
VKLTNNNSTLAMTRITSEDEAIYQCIAENMAGTNQASARLAVSLAKDLPDSPQGLTATAL
SPRALQLTWIQPPAEITDDIIGYVLHSRKIGEPDNRELQEAVSKTTFQHNFINLEPATTY
SIYLKAYSPLGASQQSSTVVATTLGGVPTPPTFFTKVVNSTAVQVLWELPSKPGKAEGFR
LTYRRVPHTNFQGPVQFPCHVNAHTISRLETGAVYEVNLVAYNGNGESGCSKRLVSLTEE
GTNAKTSGENQCNCIQDGEGSMGGIVVGIHISMACIIFCVLFLMFGYRRR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggatctgggagaaagggagcggccatctcgaggggtcaaggtggggcaggggtttttg
agtctgtttgcccacaaaaagatgaagaaaatggggaagacttgccgtgtcagcggggtc
aacttcgagaggggaatgggatacagagggcataggacaggaaacttggtgtatgaatgg
attagagacaggcaaggctccagccatgacatgctcagtgccccagtacaaaatgtatgt
ggtgccaaggagctggcattcctattggagcccagcgacgtcatcgctgtgcgggatcga
ccgctgatgctggactgccgggtggagggcgagggtaccatctcgatcacgtggcgcagg
aacggggtacccgtggttgtggaggagcgggtacaggtgctgcccaacgggaccctcttc
attcagagcttccagaaacgactagagagaggcggaagtgagacggacgttggagagtac
gactgcgccgcccagaaccgctttggcatgctggtcagccgcaaggcccgggttcagctt
gcatttctccctaagttccatacccacccagagtccatgtcagtggacgatggcggcgtg
gctcgcttcaagtgccaggtcaacagtgtgcctgaggccaacatcacctgggagagggac
agaaacccactcagtaccaccgacaacaggtacactctcctgcccatgggtgtcctccag
gtgactggtgtgaggcggatcgacgccggggtgtaccgttgtgtggcctccaacatcgcc
aacacacgcttcagccacgaggctgtgctcaatgtgaccggtggggcttccaggatctac
aaggagccagttatcctctctgggccccagaacctgaccatcactgtccaccagacagcc
attttggagtgcatcgctacagggaatccccggcccatcgtgtcttggagcaggctggat
gggcgctccatcggggtggagggcatccaggtgttgggcactggaaacctgatgatctcg
gacgtgtcgctggagcactcgggggtatacgtgtgcgccgccaaccgccccgggaccagg
atgaggcgtaccgcactgggaagactggtggttcaagctccccctgagttcatgcagtgg
ccgcagtctgtctcgaaaccagcggggggcagtgctgtattcacctgtgtggcccagggg
gtccctgagcctcacctcatctggctgaagaatggcaagatcctgatgcccagcgacaac
gtcaagctcaccaacaacaacagcaccctggccatgacgcgcatcacctcggaggacgag
gccatctaccagtgcatcgctgagaacatggcaggcaccaaccaggctagcgcccgtctg
gctgtgtccctggccaaggatctgcccgactccccccagggcctcacggccacagccctc
tcccccagggccctgcagctcacctggatccaaccgccagccgagatcaccgacgacatc
atcggctatgtgctccacagccgcaagatcggagagccggacaacagagagctgcaggag
gcagtcagtaaaaccaccttccagcacaactttatcaacctggagccagccaccacttac
tccatctacctcaaggcctactccccactgggcgccagccagcagtccagcactgtggtg
gccacaacactagggggcgtgcccactccccctaccttcttcaccaaggtggtgaactcc
actgctgtccaggtgctatgggagctccccagcaagcctggcaaggcagagggcttcagg
ctcacctaccgcagggtcccgcacaccaacttccaagggccagttcagttcccctgccac
gtcaatgcccacaccatctcccgtcttgaaaccggcgcggtgtatgaagtcaatctagtg
gcctataacgggaacggcgagagcggttgctccaagaggctggtgtcactgacagaagag
ggcaccaacgccaaaaccagtggggagaaccagtgtaactgtatacaggatggcgagggc
tcgatgggcggtatcgtggttggcattcatattagcatggcctgcatcatcttctgtgtg
ctcttcctcatgtttggataccgtcgcaggtaa
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