Oncorhynchus tshawytscha (Chinook salmon): 112266025
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Entry
112266025 CDS
T05605
Name
(RefSeq) POU domain, class 2, transcription factor 2-like
KO
K09364
POU domain transcription factor, class 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112266025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112266025
03021 Transcription machinery [BR:
otw03021
]
112266025
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
112266025
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
112266025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
112266025
NCBI-ProteinID:
XP_042150854
UniProt:
A0A8C8JXZ5
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All DBs
Position
LG13:35548674..35566128
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AA seq
587 aa
AA seq
DB search
MEGRGRKGEGAFLPVNLSSSSLHIRLAGWGCLSVGNMLYLTCFLLSPADIRMSKPAEDEK
PGADFPGESTDSERNSPDANDQVQPMKTSPFSLSPTLSSIKSKSEAVPEMISTHVPPPSQ
QQTPHPHTQLMLAGSQLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAHAAA
QANQQQQQQQQLTKQEQAPPQLTLSQPIQLTAQDIQQLLQLQQLVLMPGHHLQSPQFLLP
QAQGQQGQQGLLSTPNLIPLPQHQQSQGSLLTIPPRLGLHAQRRHGDGLSSLQRDKSGDG
GVTSGASAAPMTSVTSGPHGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGN
DFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMAIDSMLPSPNSLSSPMMGFEGMP
GRRRKKRTSIETNVRVALERNFILNQKPNSEEILLMGQQLNMEKEVIRVWFCNRRQKEKR
INPCSATPPLPSQPPSMTHKTPCYSPHMVSSQGLHQAATSLSTTVTSPLPSVTCPLTPCG
SAATSSTPSSRTPPPHSTASPAPSTLSTHSLNAGSGCQWWAAAHFQS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaggggaagaaagggtgagggagcttttctccctgtgaatctctcatcctca
tccctccatatacgcttggcgggctggggatgtttgtcagttggaaacatgttatattta
acctgcttccttctctcccctgcagatatcaggatgtcaaaaccagcagaggatgagaag
cctggggcagactttccaggggagagcacagactctgagaggaacagtcctgatgccaat
gatcaggttcagccaatgaaaacgagtcccttcagtctttctcctaccttgagcagcatc
aagagtaaaagtgaggcagtacctgagatgatctccacccatgtgccgcctccttcccag
cagcagacgcctcaccctcacacacaactcatgttggcagggagtcagctggcagggctg
gctgccctcttgcctgcgcagcagcagctgttgcttcagcaggcccaggctcagctcctg
gccgccgcggtgcagcagtccaatgcggctcacgctgctcatgccgctcacgcagccgcc
caagccaatcagcagcagcagcagcaacaacagctgaccaaacaggagcaagccccgccc
cagctcaccctctctcagcctatccagctcaccgcccaggatatccagcagctgttgcag
ctgcagcagttagtcctgatgcccggccaccacctgcagtctcctcagttcctcctgcct
caggcccagggacaacaggggcagcagggtttgctctcgacacctaatttaattccgcta
cctcaacatcagcaaagccaggggagtcttctaactattccacccaggctgggactgcat
gcacagcgtcgccatggtgatggcctctcatctttacagagggacaagagcggggacggc
ggggtgacctccggggcctcggcagcccccatgacctcagtgacctctggccctcacggc
gaggagcccagtgacctggaggagctggagcagttcgcccgcaccttcaaacagagacgc
atcaaactgggcttcacacagggtgacgtaggcatggcgatggggaaactgtatgggaat
gacttcagccagaccaccatctctcgctttgaggccctaaacctgagctttaagaacatg
tgcaagctcaagcctctgcttgagaagtggctaaacgatgcggagaccatggcgatagac
agcatgcttcccagcccgaactctctctcctcccccatgatggggtttgagggcatgccg
gggcgtcgcaggaagaaacgcaccagcatcgagaccaacgtccgcgtggccttagagcgc
aatttcatcttgaaccagaagcctaactcagaggagattctcctgatgggccagcagctc
aacatggagaaggaggtgattcgggtctggttctgcaaccggcgccagaaagagaagcgc
atcaacccttgcagtgccacccctcccctgcccagccagcccccttccatgacgcacaaa
accccctgctacagcccgcacatggtgtccagtcaggggctgcaccaggctgccaccagc
ctcagcacaacagtgaccagtccattaccctcggtgacctgccctctgaccccctgtggc
tctgcagccaccagctccaccccctcctctaggactccacctccacacagcacagccagc
cccgctccttccaccctcagtacccacagcctgaacgctggctctggctgccagtggtgg
gcagctgcccatttccagtcttga
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