Oncorhynchus tshawytscha (Chinook salmon): 112266030
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Entry
112266030 CDS
T05605
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112266030
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112266030
04082 Neuroactive ligand signaling
112266030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112266030
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glutamate (ionotropic)
112266030
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
112266030
NCBI-ProteinID:
XP_024299295
UniProt:
A0AAZ3STI6
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All DBs
Position
LG13:complement(36446653..36515535)
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AA seq
1917 aa
AA seq
DB search
MAAKPALSLLLAVLACTGPARSSPPLLLRPRERERDLGVVNIAVVHSGSSLLPETAAAGG
TGATNGPGGPQGRGASSSLAMVAASAPLASASAALVGGSVMTQYGPANVIYLTVNESSPA
SLLLQLCELLATTPLQGLVFEEERPPPPDQAPLAPMLEFVSAQTGVPVVAVGGGAGLGRE
PQESGSIYLQFTCSTAMQLDVVFEVLEEFDWTSFSVVATRHHGYEDFLAMVEALTDGSFI
GWEKKGVVMLNVTDDPGGTRASRLLKENEAQVRLLYCSQEEAALIFKAAWASGQAGHSHM
WFAVGPALSGLGLEGLPKALFAVRPQGWRDEPRRRIAKGVSVLTHGAMALRKEYGWARGP
HYFAGNCQTDGNQTQRVPDRIRFFSNITLSGRDYSFNSDGYLSNPVLDVISYTEGKGWEE
VGTWQNGVLDLIIQPFSRYGSFLKPLDDTQHLKVVTLEERPFVIVEPADPGTNSCIRDSV
PCRLPLNTTNVPVDEKSSKHCCKGFCIDVLKRLAKIVGFSYDLYLVTNGRHGKRGSDGQW
NGMVGEVVYKRADMAIGSLTVNKERSEVVEFSVPFVETGISVMVSRSNGTVSPSAFLEPY
SPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSAKKTGGSKFTIGKSIWLLWALVF
NNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQQP
TEQYPPLRFGTVPNGSTEENIRSNYANMHNFMIRNNQKGVEEAIDNLKTGKLDAFIYDAA
VLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNTRWKRPVDLALLQLVGDDEIDMLER
LWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKIRHCLGRSG
GMDFLLALSRGMYSCCKFEDETVSGGLRNTLPLYQSVPTMPPPPQSHISAAVTCNTTLAM
VQQQQRHHHQQHEQQQQQAYSMLPAGSPPTTGHSAMALGPSNSPLLEGPMPCSTFLPRHD
RRLAVVDRWNRPKPGTDKPIGGSGGIPDMAQFQQGLPPHWAGGASGGDGSLDEYKRYYGP
IDPEGLGANADPQTGGTQTPKMNQRGTKSSGMPRLPSKGPPPGHLMSKPPLPLPSSPHPP
PFWRRGSLLKRKGSGGPLYENILPLGRRGGGRYGVRDGGGRRGRRPPPLPLPVPVASPAL
TTPTTPSHSALYTSSSCSSTSSSSSSSSSSVSPSRSNSPSSSTITYTSSQSFKYRAGSRD
VEDVYDSDELTEESSLLLGRRKGKSRRMSSRSLPCSPPPPPVPPRKPRLQYERERAGSQL
AQLQEWWASWGERERRRGTGTRAEGKEEKRHHKERERERKRRKKGRKKKKREEKERERER
KRRKVKEKKKKREDKAKRRDRGKRSEHEEGGGEQRGQLKAIMQEAYSSYPAPRRDSMRKK
SEGSIRSYGWDIPREEERRDSEDKARDGEDTRGKERHRSPYSRHRHAGRPSSSSKQYQSP
RKPSTAVKFWGAGNPSSEIPSSAFLPLIPLSSRHRSKGAGRAALGKEGETRPLLGRNERV
EVHSKEGLSFHEWDSEDEDEDSEEERRKVEQEKRHERRRRTASESERESDKMVGIYSDDD
GSSGEFGKFERYWEGHEGRAVGGIGGGGWFFGTYPAREKAGSINSRDGSLLGRGEEWGGA
GGVGEGGWGSGRIGGTQWPPPPLTPPAPRRYWSVDKLPVKEEKKERRKDKDKGRGDVACN
CQSALEHQHAHSKLAKVSSPSQEELFLHCQSFVTSANSKRHSFKPDRTQNQPKSGSQSNL
SIQRTDRIRQPSTSQVLIPSLPPPTLPALPAPPSSSHPIHIPPPNSSSSVSSPSVVSSTP
GAPQPSSMASASAKLLYQRLRSVPQPQRLQSPHLPLKAKSLCSRRGSAHFSSVESEV
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaagcccgccctctccctcctgttggccgtgttggcctgcacggggcccgcc
cgctcctcccctcccctcttgctccgcccccgggagagagagagggacttgggtgtagtc
aacatcgctgtggtccactcgggctcctccctgctcccggagacggccgctgctggggga
acgggcgccacgaacgggccggggggtcctcaggggaggggggcctcatcgtcattggct
atggtggcggcgtctgcgccactggcttctgcgtcagcggctctggtgggcggtagcgtg
atgacgcagtatggcccagccaacgtgatctacctgacggtgaacgagagcagcccggcg
agccttctgctgcagctgtgtgagctgctggccaccacgccgctccaggggctggtgttc
gaggaggagaggcccccgccacccgaccaggctcccctggcccccatgctggagtttgtc
tcggcccagaccggagtgcctgttgtggccgtgggaggaggggccggcctgggcagggag
ccacaggaaagcggctccatctacctccagttcacctgctccacagccatgcagctggac
gtggtctttgaggtgctggaagagttcgactggacctccttctccgtggtggccacgcgt
caccacggctacgaggacttcctggccatggtggaggcactgacggacggatccttcatc
ggctgggagaagaagggcgtggtcatgctcaacgtcaccgacgacccgggagggacacgc
gcgagcaggctgctcaaggagaacgaggcgcaggtgcgtctcctctactgctcccaggag
gaggccgcgctgatcttcaaggcggcctgggcctcgggtcaggccggacactcccacatg
tggttcgccgtggggccagctctgtccggccttggcctagagggcctccccaaggccctg
ttcgcagtgcggccgcagggctggagagacgagccccgtcggaggattgccaaaggggtg
tctgtgctgacccacggagccatggctctgaggaaggagtacggctgggcccgagggcca
cactacttcgcaggcaactgccagacagatggcaaccagacgcaaagggtgccagacagg
atcaggttcttcagtaacattacgctgagtggccgggactactcgttcaacagtgacggc
tacctgtccaatccagtgctggatgtgatttcctacaccgaggggaaaggctgggaggag
gttggcacgtggcagaacggtgttctggatctcatcattcagcccttttcacgctacggc
tccttcctcaagcctctggatgacacccagcacctcaaggtggtcaccctggaggagagg
ccctttgtcattgtggagccagccgacccaggcaccaactcctgcatccgggactcggtg
ccctgcagactaccgctcaacaccaccaatgtgccggtggatgagaaatcgtcgaagcac
tgctgcaaaggcttctgcattgatgtcctcaagcgattggccaaaatagtgggcttctcc
tatgacctctacctggtgaccaatggcagacacgggaagagggggagtgatgggcagtgg
aatggcatggtcggggaggtggtttataaacgggccgacatggccattggctccctgacc
gtcaacaaggagaggtcggaggttgtggagttctccgtgcccttcgtggagacaggcatc
agcgtcatggtctcccgtagcaacggcaccgtctcgccgtcggccttccttgagccatac
agcccagctgtgtgggtgatgatgttcgtcatgtgcctctccgtggtcgctgtcacagtc
tttattttcgagttcttcagtcccgtcggctacaaccgcagcctgcaaagtgcaaagaag
acagggggctctaaattcaccatagggaagtctatctggctgctgtgggcgttggtcttc
aataactcagtgcctgtggagaaccccagaggaaccaccagtaagatcatggtgctggtg
tgggccttctttgcggtcatcttcctggcctcctacacggccaacctggcagccttcatg
atccaggaggagtacatcgacactgtgtctggcctcagcgacaagaagttccagcagccc
actgagcagtaccccccgctccgatttggcaccgtccccaacgggagcaccgaggagaac
atccgcagcaactacgccaacatgcacaacttcatgatccgcaacaaccagaagggcgtg
gaggaggccatcgacaacctcaagactggtaaactagatgccttcatctatgatgcggct
gtgctaaactacatggcgaggaaagacgagggctgtaaggtgatgaccattggctcgggc
aaggtgtttgccaccacgggctacggcatcgccctgcataagaacacccgctggaaacgc
cccgtggacttggccctcctgcagctggtgggagacgacgagatcgacatgctcgagcgc
ctgtggctctcggggatctgtcacaacgacaagattgaggtgatgagctccaagctggac
atcgacaacatggcgggggtcttctacatgctgctggtggccatggggctcagtctgctg
gttttcgcctgggagcacctggtgtactggaagatcaggcactgcctgggccgttccggt
ggcatggacttcctattggctctcagcaggggtatgtacagttgctgcaagtttgaagat
gaaaccgtgtctggaggcctccgaaacacacttcccctatatcagagtgttcccacaatg
ccgcctccaccccagtcccacatctcagcggctgtaacctgtaacaccactcttgccatg
gtacagcagcagcagaggcatcatcaccagcagcatgagcagcagcagcagcaagcatac
agcatgcttcctgctggatctcctccaactactgggcactctgcaatggcccttgggcca
tcaaacagtccccttttggagggtcctatgccgtgctccacttttctgcctcgccatgac
cgcagattggctgtggtagaccgctggaaccgtcccaagcccggcacggacaagcctatt
ggtggcagcggtgggatcccagacatggcacagtttcaacagggcttgccccctcattgg
gctgggggagccagtggaggggacggtagtctggatgaatacaagcgatactatggcccg
atcgatccagagggcttaggggcaaatgctgacccacaaacaggtggcactcaaaccccc
aaaatgaaccagagggggacaaagtcctcaggaatgccacggctaccttctaaaggaccg
ccccctggtcacttaatgtccaagccccctctaccgctcccctcatccccacatccacct
ccattttggagaagaggcagcctcctgaaaagaaagggctccggggggcctctgtatgag
aacatcctccccttggggagaagagggggagggcggtacggagtaagggatggaggtggc
aggcgaggccgtcgccctcccccactcccattgcctgtccctgtcgcgtcccctgccctc
actacccctaccactccctctcactccgccctctacacctccagctcctgctcctccacc
tcatccagttcatcctcgtcctcatcctccgtctccccctcacgctccaactccccctca
tcctccaccatcacatacacatcgtcccagagttttaagtacagggctggcagtagggat
gttgaggacgtctatgactctgatgagctgacagaggagtctagcctcctgctaggacgg
agaaagggcaaatcccgacgcatgtcctctcgctcactgccttgcagtccgccccctccg
cctgtaccaccccgcaagcctcgtctgcagtatgagagagagagggctgggagccagcta
gcccagctgcaggagtggtgggcctcctggggcgagagagaaagacgcagaggaacagga
accagggctgaggggaaggaggagaaacggcatcacaaagagcgagaaagggagagaaag
aggaggaagaaaggccggaagaaaaaaaagagagaggagaaggagagggagcgggagcgc
aagcggcgtaaagtgaaggagaagaagaagaagagagaggacaaggcgaagagaagagac
cggggcaagcggtcagagcacgaggagggaggtggtgagcagagagggcagctcaaagcg
ataatgcaagaggcctactcctcctacccggctccgaggcgtgactctatgaggaaaaag
agtgaaggttctatcagaagttacggatgggatattccaagggaggaagagaggagggac
agcgaggacaaggcaagagatggagaggacactagaggcaaggaaaggcacagaagtcct
tactctcgccacaggcatgcaggtaggccttccagttccagcaagcagtaccagagcccc
agaaaaccctcaaccgctgtcaagttctggggagcgggaaacccatcgtcagagattcct
tcgtctgcatttctgccactgatccctctctcgtccaggcacaggagtaagggtgcaggt
agagcggccctagggaaagaaggggagacgcgccccctgttgggcaggaacgagagagtg
gaggttcactccaaagaaggtctgtcgtttcacgagtgggactccgaagatgaggatgaa
gattccgaggaggaaaggagaaaagtggagcaagagaagagacacgaaagaagacgaagg
accgcatcagagtccgaaagggaaagtgataagatggtgggcatctactcagacgacgac
ggctcctcgggagaatttggaaagttcgaaaggtactgggagggtcatgagggtagagcg
gttgggggaataggagggggaggctggtttttcggcacttatcccgccagagaaaaagcc
ggcagcataaacagtagggatggctcgttattgggccgtggggaggaatggggcggagca
gggggagtaggggaaggtggctggggatcagggaggataggtggtactcagtggcctcca
cctccattgacaccaccagctcctcgaagatactggtccgtggacaagcttcccgtgaag
gaggagaagaaagagagacggaaggacaaggacaaagggcgaggtgatgtggcttgcaac
tgccaatctgccctcgaacatcaacacgctcactctaaattggccaaggtgagctcccct
agccaggaggaactatttctacactgtcaaagctttgtgaccagcgccaattccaaacgg
cattccttcaaacccgaccggacccagaatcaacccaaatcgggaagccagtccaacctc
agcatccagcggacagaccgcattcggcagccttcgacatcgcaggtcctcatcccctcc
ctccctccaccaacactcccagcccttcctgcccctccctcctcatcccatcccatccac
atccctcctccgaactcgtcctcttcggtctcgtctccctctgtagtatcctccacccca
ggcgccccccagccgtcttctatggcttctgctagtgccaaactcctgtaccagagactg
cgctcagtgccccagccccaaaggttacagtcacctcacctgcccctcaaggccaagagc
ctctgctcacggagggggtccgcacacttctccagtgtggagagcgaggtgtga
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integrated database retrieval system