Oncorhynchus tshawytscha (Chinook salmon): 112266072
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Entry
112266072 CDS
T05605
Name
(RefSeq) ARF GTPase-activating protein GIT1 isoform X1
KO
K05737
G protein-coupled receptor kinase interactor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112266072
09142 Cell motility
04810 Regulation of actin cytoskeleton
112266072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112266072
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112266072
Endosome - Golgi transport
Arf GTPase associated proteins
112266072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank
Ank_4
Ank_5
TTRAP
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
112266072
NCBI-ProteinID:
XP_042151902
LinkDB
All DBs
Position
LG13:54941102..54963495
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AA seq
671 aa
AA seq
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MSRKVHRTEVCADCSAADPGWTSINRGVLICDECCSVHRSLGRHISIVKHLRHSGWPPAL
LQMVQTLASNGANSIWEHSLLDPAQVQSGRRKPNPQDKVHPTKSEFIRAKYQMLSFVHKL
PCRDDDGVTTKDLSKQLHSSVRTGSLETCLRLLSLGAQANFFHPEKGTTPLHVAAKAGQV
LQAELLVVYGADPGALDINGRTPMDYARQAGQVELAERLVECQYELTDRLAFYLCGRRPD
HKNGHYIIPQMADRARPKCPTQSLDLSELAKAAKKKLQALNNRLFEELAMDVYDEVDRRE
NDAVWLTTQNHSTLVTERSAVPFLPVNPEYSATRNQGRQKLARFNAREFATLIIDILSDA
KRRQQGKGLSSPTDSSLDLGADDDQHDYDSVASDEDTDSELTTQNNNNAQRNNRAKSMDS
SDLSDGPITLQEYLEVKKALASSEAKVQQLMKVNNNLSEELRRLQKEVRKGGPGGPTPYG
GSHLSGSMEMGRYMGPKGEKHGSGTDSDYDNTQMYELSLSRGRSSEEEGRGDSEEWGGGE
GGEPDPTLPCTEDVILKTEQVTKNIQELLRAAQEFKHDSFVPCSEKIHSAVTEMASLFPK
RPALDAVHCSLRLLASSASRLQVECRKADPSDPSAPAVDYQLLTQQVIQCAYDIAKAAKQ
LVTITTREKKQ
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaaaggtccacagaaccgaagtatgtgccgactgcagtgcagcagatccaggc
tggaccagcatcaacaggggcgttctgatctgtgacgagtgctgctctgtgcaccgcagc
ctgggacgccacatctccatcgtcaagcacctgcggcacagcggctggccccctgcactg
ctgcagatggtgcagaccctggccagtaatggggctaactcgatttgggagcactccctg
cttgacccagcgcaggtgcagagcggccgcaggaaacccaacccacaggacaaagtccac
cccaccaagtccgagttcatccgcgccaagtaccagatgctatccttcgtccacaagctg
ccgtgccgcgatgacgacggtgttaccaccaaggacctcagtaagcaactgcactccagt
gtgaggacggggagtctggagacatgtctacggctgctgtccctgggagcacaggccaac
ttcttccacccggagaagggcaccactccactccacgtggcagccaaggcaggccaggtt
ctgcaggcagagctgctggtcgtttacggagccgaccccggagctctggacatcaatgga
cgcacacccatggactacgccaggcaagcgggccaggtggagctggcagagcggctggtt
gagtgtcagtacgagctcacagacaggctggccttctacctgtgtggccgacgccctgat
cacaagaatgggcattatatcattcctcagatggctgacagagctcgccctaagtgtccg
acacagagcctggacctctcagaactggccaaggcagctaagaagaagctccaagcgctg
aacaatcgattgtttgaggagcttgccatggatgtgtatgacgaagtggaccgcagggag
aacgatgcagtgtggctgacgactcagaaccacagtactctggtgacggagcgcagcgcg
gtgcccttcctgcctgtcaaccccgaatactcagccacacgcaaccagggtagacagaag
ttggcccgttttaacgctcgtgagttcgcaacgctgatcatcgacatcctgagtgacgcc
aagaggagacaacaagggaaaggcctgagcagccctactgactctagtctggacctgggg
gccgacgacgaccagcatgactacgacagcgtagcgtcggacgaggacacggacagcgag
ctgaccactcagaacaacaacaacgcgcagcgcaacaaccgggccaagagcatggactcg
tcagacctgtcggacgggcccatcactctgcaggagtacctggaggttaagaaggccctg
gcctcctccgaggctaaagtccagcagctgatgaaggtcaacaacaacctgagtgaagag
ctgcgccggctgcagaaagaggtgaggaaggggggtcctggcggtccaacaccctatgga
gggtcgcacctctctggctccatggagatggggagatacatgggtcctaaaggagagaag
cacggcagtggcactgatagtgactatgacaacactcagatgtatgagctgtcgctaagt
agggggcgcagcagtgaagaggagggccggggggattcggaggagtggggtgggggtgaa
gggggtgagccagacccgaccctgccctgcaccgaagacgtcatcctcaagacggagcag
gtgaccaaaaacatccaggagcttctgagggccgcacaagagttcaaacacgacagtttt
gttccatgctctgagaagatccactctgctgtcactgaaatggcctctctctttcccaag
cggcctgccctagacgctgtgcactgctccctgcgcctcctggcgtccagcgcctcccgc
ctccaggtggagtgtcgcaaggcggatccctcggacccctcagcgcccgccgtcgactac
cagctgctcacccagcaggtcatccagtgcgcctatgacatcgccaaggccgccaagcag
ctggtcaccatcaccacccgcgagaagaaacagtga
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