Oncorhynchus tshawytscha (Chinook salmon): 112266100
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Entry
112266100 CDS
T05605
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112266100
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
112266100
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_3
Motif
Other DBs
NCBI-GeneID:
112266100
NCBI-ProteinID:
XP_024299349
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Position
LG02:complement(58984769..59042965)
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AA seq
551 aa
AA seq
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MSLIEEYEEGEYERAPKRLKTMDVEEGEDLEEGEDSDTASAGLLGDEEDATGTAGENRAR
WSTKKYGSGRKDNGEDAHRIAPSPVVHVRGLCESVVEGDLVEALEKFGNICYVMMMPFKR
QALVEFEAMESADQCVTCGANEAVYIAGQQAFFNYSTSKRITRPTNADDPNSGNKVLLLS
IQNPLYPITTDVLYTVCNPIGNVLRIVIFKRNGIQAMVEFETVKNAQKAKSALNGADIYA
GCCTLKIEYARPTRLNVLRNDNDSWDYTKPFLVRRERGKGRQRQAILGEHPSSYSDNGYG
PHCPLLPVPSNNRYKRSSLHDAQEVVAYPLPQTSSYMGHASSSSVAMVSGLHPAKMNCTR
IFNLFCLYGNIEKVKFMKSVPGTALVEMGDEYAVDRSITHLNSIKVFSKRLNVCVSKQHA
VIPSQVFELEDGSSSYKDFGMTRNNRFSSVGQASKNIIQPPATVLHFYNVPPCITEDELQ
RLCTEHEVPGFIKFKVFDAKPSSKTISGLFEFDNKTHAVEVLTVLNHHQIRIPNGSNPYT
LKLCFSTSSHL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcattgaggaatacgaggaaggggaatacgagagggcgcctaagcgtctcaag
acgatggatgtggaggagggagaggatttggaggagggggaggattcagatacagcttcc
gcggggctgctaggagatgaggaggatgctactgggaccgccggggaaaaccgggcccgg
tggtcaacaaaaaaatatgggtctggaagaaaggacaatggggaggatgcccacaggatc
gccccttctccggtggtccacgtgcgggggctctgtgagtcagtggtggaaggggacctg
gtggaggccctggagaagtttggcaacatctgctacgtcatgatgatgccgttcaagcgt
caggcgctggtggagtttgaagccatggagagtgccgaccagtgcgtgacatgcggtgcc
aacgaagcggtctacattgccggccagcaggccttcttcaactactccaccagcaagagg
atcacgcggccaactaacgccgatgaccccaacagtggcaacaaagtcctgctcctctcc
attcagaaccccctctatcccatcaccactgatgttctgtacacagtctgcaatcccata
ggcaacgtactgcgcattgtcatcttcaaacgcaatggaatccaggccatggtggagttc
gaaactgtcaaaaatgcccagaaggcaaaatcagcactcaacggagcagacatatacgcc
ggctgctgtaccctgaagatagaatacgctcggcccacgcgacttaacgtcctccgcaac
gacaatgatagctgggactacaccaagccctttctcgtcaggcgagagcgggggaagggg
aggcaacgccaggccattctgggagagcatccgtcctcctacagcgacaacggctatggg
ccacactgccccctgctgcccgtgcccagcaataacaggtacaagaggagctctctccat
gacgcccaagaggtggtcgcttaccccctgccccagacctcctcctatatgggccacgcc
tccagctcgtcggtggccatggtgagcggcctgcacccagccaagatgaactgcacccgc
atcttcaacctcttttgcctgtacgggaatattgagaaggtgaagtttatgaagagcgtc
ccgggcaccgcactggtagagatgggagatgagtacgctgtggaccgatctatcacacac
cttaacagcatcaaggtgttcagcaagaggctcaacgtctgtgtgtccaagcagcacgcg
gtcatccccagtcaggtgtttgagctggaggacggcagcagcagctacaaggacttcggc
atgacccggaacaaccgcttcagcagcgtgggccaggcgtccaagaacatcatccagccg
cccgccactgtgctgcacttctacaatgtcccgccctgcatcactgaggacgagctgcag
aggttatgtacagagcatgaggtacccggtttcatcaagttcaaagtcttcgatgcaaaa
cccagctccaaaacgatctcaggcttattcgaatttgacaacaagacacacgctgtggag
gttctaacagtcctcaaccaccaccagatcagaataccaaatggttccaacccttacacc
ctcaagctttgcttctccacttcctcacacctctga
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