Oncorhynchus tshawytscha (Chinook salmon): 112266110
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Entry
112266110 CDS
T05605
Name
(RefSeq) atlastin-2 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112266110
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112266110
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
SPW
Motif
Other DBs
NCBI-GeneID:
112266110
NCBI-ProteinID:
XP_024299356
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Position
LG02:complement(58936280..58964642)
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AA seq
583 aa
AA seq
DB search
MAEESRLQHRNHSPQNCKNSIFGEGEHGVESVPHKMSPEEEEGLLSEEDEEEALSARPVQ
IVVAHEDDHAFELDEAALERILLQEHVRDLNVVVVSVAGAFRKGKSFLLDFMLRFMYNQT
SCSWLGGHEEPLTGFTWRGGCERETTGILAWSEVFVVDKPDGSKVAVLLIDTQGAFDSQS
TIKDCATLFALSTMTSSVQVYNLSQNVQEDDLQHLQLFTEYGRLALEEIYEKPFQTLMFL
IRDWSYPYEHSYGLEGGKSFLEKRLQVKQNQHEELQNVRKHIHSCFSNIGCFLLPHPGLK
VATNPNFDGRLTDIDDDFKTELVNLVPILLSPENLVEKEIGGSKVTCRDLVQYFKAYMKI
YQGEELPHPKSMLQATAEANNLAAVAGAKDIYNKGMEQVCGGDKPYMAPDQLECCHANLL
QVAVKHFRSVKKMGGEDFCRCYQEQLEAELDEAFTNFIKHNDGKNIFYAARTPATLFAVM
FAMYVASLVTGFLGINTVATVCNLIMGVALAALCLWAYVKYSGEFREVGSVIDQVAETLW
EQRTPRKIFSKLFEVARSRVSLDSLITAQRTRLASNNNVKKKN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagagcaggttgcagcatcggaatcactctccgcaaaattgcaaaaacagc
attttcggcgaaggtgagcatggggtggagagtgtgcctcataagatgagccctgaggaa
gaggagggcctgttgtcggaggaagatgaggaagaggccttgtcggccaggccggtccag
atcgttgtggctcacgaggacgaccacgcctttgagctcgacgaggcggcgctggagcgc
atcctgctgcaggagcatgtgcgcgatctcaacgtggtggtggtgtcggtggccggtgcc
ttccgcaagggcaagtccttcctgctggacttcatgctgcgcttcatgtacaaccagaca
tcttgctcctggctgggtgggcacgaggagccactaacgggcttcacctggcgggggggc
tgcgagagggagaccacgggcatcctggcctggagcgaggtgtttgtggtggacaagcca
gacgggagcaaggttgctgttcttctaatcgacacacagggggctttcgacagccaatcg
accatcaaagattgtgcgacgctgtttgcgttgagcaccatgaccagctctgtacaggtt
tacaacttgtctcagaatgtgcaggaagacgaccttcaacatctccagctcttcactgaa
tatgggaggctggccttggaagaaatctacgagaaaccatttcagactttaatgtttctt
ataagagactggagctacccttacgagcattcttacggcttagagggagggaagagtttc
ctggagaagagattacaagtgaaacagaaccagcacgaggagctgcagaatgtcaggaag
cacatccattcctgcttctcgaacattggctgcttcctcctgccccaccccggcctcaag
gtggccaccaaccccaactttgatggcagactcacagatattgatgacgatttcaagact
gagctagtcaacctagtgcccatcttgttgtccccggagaacttggtggagaaagaaatc
ggaggatccaaagtgacgtgccgagaccttgtacagtattttaaagcatacatgaaaata
taccaaggggaggagctgcctcatcccaagtcaatgttacaggcaacggctgaagccaac
aacctcgcagctgttgcaggagcaaaagacatttacaacaaaggcatggagcaggtgtgc
ggcggcgacaagccctacatggcccccgatcaactggagtgctgccacgcaaacctgctg
caggtggcggtcaaacacttccgctcggtcaagaaaatgggcggcgaggacttctgccgg
tgctaccaggagcagctggaagcagagctggacgaggccttcactaacttcatcaaacac
aacgatggcaagaacatcttctacgctgcgcgcacgcccgccacgctcttcgccgtcatg
ttcgccatgtacgtggcgtcgctggtcacgggcttcctgggtatcaacacagtggccacg
gtgtgtaatctcattatgggcgtggcactggctgcgctctgcctttgggcctatgtgaag
tattccggcgagttccgcgaggtgggcagtgtcatcgaccaggtggccgagaccctgtgg
gagcagaggacgccacgaaagatcttttccaaactctttgaggtggcgaggagtcgagtc
tcgttggattccttgataacggcccagagaacgagactggcctcgaacaacaatgtcaag
aagaaaaactag
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