KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112266332
Entry
112266332         CDS       T05605                                 
Name
(RefSeq) histone deacetylase 4-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    112266332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112266332
Enzymes [BR:otw01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     112266332
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     112266332
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 112266332
NCBI-ProteinID: XP_042152641
LinkDB
Position
LG14:complement(1108609..1183235)
AA seq 1050 aa
MTSHSHQEGLLGKEQQLDVLKTSALNHIPTVDINSALPLRLPPAAIPMDLRIDQHHHQQQ
LSMSPSAAQASAAQAREQQLQQELLSLKQKQQIQRQHLIAEFQRQHEQLNRQHEAQLQEH
VKHQQELLALKHQQELLEHQRKMEKHRLEQELEKHQREQKLLLLKNKERGQESAVASTEV
KMRLQEFVLNKKKALAQRSLNHGGLPNDPRYWYGKTQHTSLDQSSPPQTGMGTYNHPVLG
IYNARDDFPLRKTASEPNLKLRSRLKQKVSERRSSPLLRRKDSPITTAKKRSLDMADSAC
NSAPGSGPSSPNNNSISNIPNENGVTVSNSIDVSLAQRLCGGELSQLSLYTSPSLPNITL
GLPATATSASNVTSAQQDGGQHSALSLSPPYLGGAPLATYLADGGGAGGHGPLLQHLVLL
EQTGAHGPLLAGVDALQSPSIHMLRGQHRPLGRTQSAPLPQQNAQAQALQQLVVQQQHQQ
FLEKHKQQFQQLHINKLMGKPSEPTGTRQHQSHPEETEEELREHQALSPQDGGFPCGFAI
KQEPPDPQESQEEDMQQELLFRQQAMLLEQQRIHQLRNYQASMEAAGLSITFPGHRPLSR
AQSSPASASSFPISVPPPEPPTKPRFTTGLVYDSLMQKHQCMCGNTHTHPEHAGRIQSIW
SRLQETGLRGQCECIRGRKATLEELQTVHSEAHVLLYGTNPLRQKLDCSVTPMLVRLPCG
GVGVDSDTIWNEVHSSTAVRLAVGSVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGF
CYFNSVAIAARLLQQRLNVCKILIVDWDVHHGNGTQQAFYDDPNVLYLSLHRYDDGNFFP
GSGAPDEVGSGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRSVVMPIANEFSPDVVLVSSG
FDAVEGHPPPLGGYTLTSKCFGYLTRQLMTLAEGRVVLALEGGHDLMAICDASEACVSAL
LGNQLDPLPQTLLEQRPNQNAVCSIEKVIETHSKYWRSMQRGSPRLGLSVLEAQRGDSEE
AETVSAMASLSVANKQSRSEEEPMEEEAPL
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgacatcacacagtcaccaagaaggactcctgggcaaggagcagcagctggatgtcctg
aagacgtctgccctcaaccacatccccacagtggacattaactctgccctgcccctgcgt
ctgcccccggctgccatccccatggacctacgcattgaccagcaccatcaccagcagcag
ctgtccatgtctccttctgcagcccaggcgtctgcagcccaggccagagagcagcagctg
cagcaggagctcctgtccctgaaacagaaacaacagattcagagacagcacctcatcgct
gagttccagaggcaacatgagcagctcaaccgccagcatgaagcccagctacaggaacat
gttaagcaccagcaggagctcctggccctgaaacatcagcaggagctgttggagcaccag
aggaagatggagaagcaccgtctggagcaggaactggagaaacaccagagagaacagaaa
ctactgctgctgaagaacaaggagagaggacaggagagtgcagtggccagtacggaggtg
aagatgcgactgcaggagtttgtgctgaacaagaagaaggctctggcccagaggagtctc
aaccacggggggttgcccaacgacccccgctactggtacgggaaaactcagcacacttcc
ctggaccagagctctcctcctcagactggtatgggtacctacaaccaccctgtcctgggc
atctacaacgctagagacgacttccccctccgcaagacagcctctgagcccaacctgaag
ctacgttctcgtctgaagcagaaggtgagcgagcgacggagcagccccctactgaggcgc
aaagacagcccgatcacaaccgccaagaaacgctcactggatatggcagattcagcgtgt
aacagcgctcctggatctggccccagctctcctaacaacaacagcatcagcaacatcccc
aatgagaacggcgtcactgtctccaacagcattgatgtgtccctggctcagcggttgtgt
ggtggtgaactcagccagctgtctctgtacacgtccccctccctccccaacatcacccta
ggtctgcccgccacggccacctctgcttccaatgtgacctcagcccagcaggatgggggt
caacattcggccctctccctcagccccccctacctaggcggtgcccccctagccacctac
ctggctgacggagggggcgcaggggggcacggcccactactgcagcacttggtcctgctg
gaacagactggcgcgcacgggcccctactggcaggtgtggacgccctccagtctccctcc
atccacatgctgcgtgggcagcaccgtcccctgggtcggacccagtcggccccactgccc
cagcagaacgcccaggcccaggccctgcagcagctggtggtccaacagcaacaccaacag
ttcctggagaaacacaaacagcagttccagcagctacacatcaacaagttgatgggcaag
cccagtgagcccacggggacccggcagcaccagagtcacccggaggagaccgaggaagag
ctgagggagcaccaggccctctctccccaggacggcggctttccatgtgggttcgccatc
aaacaagagcccccagacccccaagagagccaggaggaggacatgcagcaggaactgctg
ttcagacagcaggccatgttgttggagcagcagagaatccaccagctgagaaactatcag
gcttccatggaggcagccggtctgtcaatcaccttcccaggtcaccgccccctctccagg
gcccaatcgtctccggcctccgcttcctccttccccatctctgtcccgcctcctgagcct
cccaccaaacctcgcttcaccacagggttggtgtatgactctctgatgcaaaagcaccag
tgtatgtgcgggaacacacacacccatccggagcacgccgggcgcatccagagcatctgg
tccagactgcaggagacaggacttaggggacagtgtgagtgtatccgtggtaggaaggcc
actctggaggagctccagacagtccactctgaagcccacgtcctgctgtatggaaccaac
cccctccgacagaaactagactgttcagtcacgcccatgttggtcagattaccatgtgga
ggagtgggggtggacagtgacaccatctggaacgaggtccattcctctactgcagttcgt
ctggctgtgggttctgtggtggagctggtgttcaaagtggccactggtgaactgaagaac
ggctttgctgtggttcgaccccctggacaccatgcagaagagagcactcccatgggcttc
tgctactttaactcagtagccatcgcagcccggctgctccaacagagactcaacgtctgc
aagatcctcatagtagactgggatgttcaccatggcaacgggacccagcaggcattttac
gatgaccccaacgtgctgtacctgtctctccatcgatacgacgatggaaacttcttccct
ggcagcggagcacccgacgaggtgggcagtggtccaggagtaggttttaacgttaacatg
gccttcaccggggggctggagccacctatgggagatgcagagtacctggcagccttcagg
tctgtggtgatgcccatagctaatgaattttctcctgacgtggtgctggtgtcctcaggc
ttcgacgccgtcgagggtcaccctcctcccctaggcggttacaccctcacctccaaatgt
tttgggtacctgacacgtcagctgatgaccctggctgagggtcgcgtggtgctggcattg
gagggaggtcacgacctcatggccatctgtgacgcttccgaggcctgcgtctccgctctg
ctgggcaaccagctggatcctctccctcagacgcttctggagcagagacccaaccagaat
gctgtgtgctccatagagaaggttatagaaacacacagtaagtactggcgctccatgcaa
cgtggctcccccaggctgggcctgtctgtgctggaggctcaaagaggagactcggaggag
gctgagaccgtcagcgccatggcctctctctctgtggccaacaaacagagcaggtcggag
gaggaacccatggaggaggaagcaccattatag

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