Oncorhynchus tshawytscha (Chinook salmon): 112266337
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Entry
112266337 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112266337
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
112266337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Izumo-Ig
Ig_4
C2-set_2
Ig_6
C1-set
VEGFR-1-like_Ig-like
fn3
Motif
Other DBs
NCBI-GeneID:
112266337
NCBI-ProteinID:
XP_042169970
LinkDB
All DBs
Position
Unknown
AA seq
2291 aa
AA seq
DB search
MDIYGGAPRVLGYSRPVAAQCGTDAVLQCKIGGDPRPEVVWEKKNVQILSEGRYRLSEEG
QAYFLHITGVRLEDAGQYICKASNSVGETCAPATLKVEGTVRSGKGYRNRQRSMGCSKPG
WRMESXGGNGMGSLEGKQNREYGGQQNQNGEYRTQENREYGGQQNGEVEQRNGEVDQQSR
KVDQQSGEVDQQSGAVDQQSGAVDQQSGAVEKENGEESEREKKKQRYEGEPLLSDDRPHF
LIKPLSLRVDRGEDAAFSCKLSGNPLPQVVWEKDGKKLSDIFESAHFNVSSQDGGWFQLK
IFQTRMPDGGVYTCRAHNNQGGALAGAVLLVELVPERQENGATSNGHSNGQTSPRGMRHR
MGRHGLSRQPDEPNLNSANVKKFAVSEGKHAKFRCFVTGKPKPEIIWKKDGAPLEAGRRH
LLFEDREGYYTLKVMYCKHQDTGLYVCAASNALGHTLSSVYLTVKAPAVRFRRSLQDVEV
RERGLAVLECEVPNEGIPTAWYLEDQRLQPGGKYDIEQNGARRRLTIRDVGADDDGVYLC
EMPDGGKSIAELAVKGTIVKKLPRKLDVLEGENAVFCVEVEEENMDVHWFKDGLKLRESH
QTILKSFGKTHMLVFVNVCHGDTGVVTFVVGRSKTSSRLRVKAARHSPPICPVGVEMDVD
RPNSVLLSWEPAPTSQTTTRSVYVLERQEVGSQEWLRCATSDTATSAEVMGDSVPCEGDY
RFRVCCINKYGRSGHVEFPKVVHLVPGPKIRTPLQGCEVTEGEDALFSIDLSVMVTGTWF
LNSTQLQDSQHYSIQQAKTQHSLVIHSTKVEDHEAEVTFIANGVRDSAVLKVQAVVVKFS
PMSESDSNKRVETGDPVVLYCEVSHPSASVGWFKDGVELQVTDSLNIQSEGNMRRIVIQS
AEFTDSGVYTCETMGDVIKFNVEVEGPPVQFSEVPEEELQKSAMELDPVVLTCEVSRDDA
NATWYKDGVEVQASDNITIQTEGTMRRLIIRCAETSDAGTYSCQSGDNSLSFTVNIKESP
VMIVEPKEDVVMEGHISEQVVLQCELSRSSGEVHWFKDGLQVLETENVQLTSEGPYRRLT
VLCGSAEDSGEYVCDTDGDSVFFQVTITELPVRIVSPTESELELTSLTSERLELSCEISQ
PDAQVRWYRDGLEVEESASLILEVQGAHRTLVIPTTTVEDTGEYVCDTEDDSVTWLVTIT
EPPVKLARSETMSDVMDCFSGEPIVLEIEVSRFNAEVIWMKDGGEVEESSDVTITEDGLI
RRLTIRTPVXGDSGKYTCLASDDLIDFQVKVSEPPVKIVNRSEVKTEVKSLPSDDIELEC
ELSRANAVAKWYKDGRRLNEDERFYEEEEGAFRSLVILNAELEDCGDYFLDAGDDNIIFH
VTVQEPPVTILGNSEDTDYQEMVAGDDLILACEVSRANAPVQWYCNDRQLTSDDRTYIES
YGTLRKLILSDILPSDSGKYMCDAIDDKMVTMVKIQDSPVTFVDKQAVNIITGYEAESVT
LMGVVSKENAPVRWLKDWTPVIGDRFHTGVEGATRFLTIDPLRRSDSGEYTVDANTDEMH
FSLLVKEMRVKFAKPLNDTVAHADGMVTIRCEVCKPKADVQWLKDGVEIVPSRRFTIRAD
GVERSLTIHRLTREDTGSTPASPRTTAPPPGSESRVSSTALKMVPRVVEFLTELHNTMVL
EGEDATFKCVVSPEDVQLVWGMDGELVVMGDRFQATQNGLCHTLVIKSCQILDSSKITVE
AEGNVSKATLKVQEAQVTFTKKMEAVMAEEYGDATMETEVSLDMGEVQWMRQGVVIQPGP
RHTLVQSGRKRSLTICNLNLSDRGTYRCETLHDRTQVKLNVEPRKIAIHKGLVETDTFER
ETASFEVELSHTGVEGVWQKDGIRVKPSNHWRVSCNGLVHGLTLSNLTLEDTGTIVFSAE
GVRTSARLTVKETPVTLMKKLVDMRLEQGSPATLECELSRQNVEVRWLKNGTELKPGKNQ
YRIYSMGRKRFCQLLQCSLADAGTYTCDVGDVNTSCNLEVYEPEVEVLHGLEDLYVQEDQ
NAVFMCEVSMEDVTGEWYKDGHKIRPTSTIKIRTEGTKHFLLMCNVKAEDSGEIRFVTKQ
TESTAYLEVEEAPVSIVKPLRDRTALEKHRVILDCTVSTPRCELTWYRGKAELVSSDRLE
IHSDGCYHKLTIHEATVEDEGTYSIEVGEHTSTAQLLVEAQSLVIETELEDVAVTAPDQA
CFQCEVSVAISRPPVWTLNGETIQSSPDVRLENHGTVHKLNLKQTRPDMSGTVTFAMGKA
KSSAKLNVMWK
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atggacatatacggtggtgccccccgtgtactgggctactcgcgccccgtggcggcacag
tgtggcacggacgccgtcctgcaatgcaagatcggcggcgaccctcgtcccgaggtggtc
tgggagaagaagaatgtacagatcttgtcagagggacgctacaggctgtcggaggagggc
caggcctacttcctacacatcactggggtcaggctggaggacgctggccagtatatctgc
aaggccagtaacagcgtgggtgagacgtgtgcccctgccacactgaaggtggagggaaca
gtcaggagcggcaaggggtacagaaacagacagaggtcaatggggtgcagcaaaccaggc
tggagaatggagagttaggggggcaacggaatggggagtttagaaggcaaacagaatagg
gagtatggagggcaacagaaccagaatggggaatatagaacgcaagagaacagggagtat
ggagggcaacagaatggagaggtagagcagaggaatggagaggtagaccaacagagcaga
aaggtagaccaacagagcggagaggtagaccaacagagcggagcggtagaccaacagagc
ggagcggtagaccaacagagcggagcggtagagaaggaaaatggagaggagagtgagcgg
gagaaaaagaaacagcgctatgaaggggagcccctgctgtcagacgacagacctcacttc
ctcatcaagcccctctccctgagggtggaccggggtgaggacgcagccttctcctgtaag
ctgtcgggcaaccctctgccccaggtggtgtgggagaaggacgggaagaagctgagcgac
atcttcgagagcgcccacttcaacgtcagcagccaggacggaggctggttccagctgaag
atcttccagacgaggatgcccgacgggggtgtctacacctgcagagcccataacaatcaa
ggaggggcgctggcgggcgcagtgctgcttgtggagctcgtcccggaacggcaggagaac
ggggccacatcaaatgggcacagcaacgggcagacatcacctcgtggtatgaggcacagg
atgggaagacacggtttgtcgagacagccggacgagcccaatctgaactctgccaatgtg
aagaaatttgcggtgtcggaggggaaacatgctaagttccgctgcttcgtgacagggaaa
cctaagcctgagatcatctggaagaaagacggagcgcccctagaggctgggaggcgtcac
cttctgtttgaggacagagagggttactacacgctcaaagtgatgtactgtaaacatcag
gacacagggctgtacgtgtgtgctgcgtccaacgctctgggacacaccctcagctctgtt
tacctgactgtcaaagctccagcggtgcggttcaggcggtctctgcaagacgtggaggtg
agagagagaggcctggccgtgttggagtgtgaggtacctaatgagggcatccctactgcc
tggtacctggaggaccagagactgcagccaggtggtaaatacgacatagagcagaacgga
gccaggcgcaggctcactatcagagatgtaggagcagacgacgatggggtctatctctgt
gagatgcctgatggagggaagagtatcgctgagctggccgtcaaaggcacaattgttaaa
aaacttcctcgaaaactagacgtgttagagggggagaatgctgtgttctgtgtggaggta
gaggaggagaacatggatgtccactggttcaaagatggcctgaagctacgcgagagccac
cagactatcctcaagtcctttggtaaaacccacatgctggtgttcgtcaacgtctgccac
ggggacactggggtcgtgaccttcgttgtgggaagatccaagacctcgtcccggctcaga
gtcaaagctgccagacacagccctcccatctgtccagtgggggtggagatggatgtggac
aggcccaacagtgtgctcctctcctgggagccggcccccaccagccaaaccaccacgcgc
tccgtctatgtcctggagagacaggaagtgggatcacaggagtggctgaggtgtgcgacc
tccgacacggcgacctccgcagaggtcatgggcgacagcgtgccgtgcgagggcgattac
cgcttccgtgtctgctgcatcaataagtatggccgtagtggacatgtggagttccctaaa
gtcgtccatcttgtgccaggtcccaagatcaggacccctctccagggctgtgaggtgacg
gagggggaggacgccctgttctccatcgatctgtcagtgatggtgacgggcacctggttc
ctgaacagcacccagctacaggatagccaacactactctatccaacaggccaagacacag
cactccctggtaatccacagcaccaaggtggaagaccatgaggcagaggtcaccttcatc
gccaacggagtcagagactcagcagttctcaaggttcaagctgtggtggtgaagttcagc
ccaatgtcagagtcagacagtaacaagagggtggagactggtgaccctgtggtcctgtac
tgtgaggtgtctcacccctcagccagcgtgggctggttcaaggatggggtggagctacag
gtgacagacagcctcaacatccaatcagaaggcaacatgaggaggattgttatccaatcg
gctgagttcaccgactctggcgtgtacacatgcgagacgatgggtgatgtcatcaaattc
aacgtggaggttgaaggtccccctgtgcagttcagtgaggtccctgaggaggagctccag
aagtctgccatggagctggatcctgtggtgctcacctgtgaggtttccagagatgacgcc
aacgctacctggtataaggatggggttgaggtccaggccagtgataacatcaccatacaa
acagagggcaccatgaggagactgatcatccgttgtgctgagacctcagacgcaggaacc
tacagctgtcagtcaggagacaacagcctctcattcactgtcaacatcaaagagtctcca
gtgatgatcgtggagcccaaggaggatgtggttatggagggtcatatctctgagcaggtg
gtcctgcagtgtgagctgtcccgctccagcggtgaggtccactggtttaaggacggcctt
caggtcctggagacggagaacgtccagctgacgtccgagggaccgtacaggaggctgacc
gtcctctgcggctcggcagaagattccggagagtacgtctgtgacacggatggagactct
gtgttcttccaggtcaccatcacagagcttccggtgcgaatcgtctcccccactgagtct
gagctggagctgaccagcctgacctctgagaggctggagctcagctgcgagatctcccag
cctgatgcccaggtacgctggtaccgagatgggctggaggtggaggagagtgcctctctc
atcctggaggtccagggagcccacaggacactggtcatccccacaaccactgtggaggac
acaggagagtatgtgtgtgacacagaggatgactcggtcacatggctggtcactattaca
gagcctcctgtaaagctggcccgctctgaaacaatgtctgacgtaatggactgtttctct
ggagaacccatcgtcctggagatcgaggtgtcacggttcaacgctgaggtgatctggatg
aaggatggaggagaggtggaggagagcagtgatgtcaccatcactgaggatggactcatc
cgccgcctcaccatccgcacgcccgtcnccggggactctgggaaatacacctgtcttgcc
tcagatgacctcatcgacttccaggtcaaggtgtcagagcccccagtgaagattgtgaat
aggtcagaagtcaagacagaggtcaagtccctgccctctgatgacattgagttggagtgt
gaactctccagggccaatgccgtcgctaagtggtacaaagatggccgccggttaaacgag
gacgagaggttctatgaggaggaagaaggggcgttccgctccctggtgatccttaacgct
gagctggaagattgcggagactacttccttgatgctggagatgacaacatcatcttccat
gtcactgtgcaagagcctccagtgaccatcctggggaactctgaggacacagactaccag
gagatggttgccggggacgacctgatcctggcctgtgaggtgtcccgggccaatgcccct
gtccagtggtactgtaacgacagacagctgactagcgatgaccggacctacatcgagagc
tacggcacgctgaggaaactcatcctctctgacatcctgccctccgactctgggaagtac
atgtgtgatgctatcgatgacaagatggtcaccatggtgaagatccaagactcccccgtc
accttcgtagacaaacaagcagtgaacatcatcacgggttacgaggcagagagtgtgacg
ctgatgggggtcgtgtctaaggagaatgctccggttcgctggctcaaggactggacgccc
gtcataggggaccgcttccacacgggggtcgaaggagccacccggttccttaccatcgac
ccgctgagacggtcagacagcggagagtacacagtagacgccaacacagacgagatgcat
ttcagtctgctagtcaaagagatgagggtgaagtttgccaagccgctcaacgacaccgtg
gcccatgcggacggcatggtgaccatacgatgtgaggtgtgtaagcccaaggcggacgtc
cagtggctgaaggacggcgtggagatcgtccccagccggaggttcaccatccgggccgac
ggcgtggaacgcagcctgaccatccacaggctgaccagggaggacacggggagtacgcct
gcgagtccaaggacgaccgcaccgccgccaggctcagagtcgagagtaagtagtacagcc
ctcaaaatggtgcctcgcgtggtagagttcttgacagagctccacaacaccatggtgtta
gagggagaggacgccaccttcaagtgcgtggtgtcgccagaggacgtgcagctggtgtgg
gggatggacggcgagctcgtcgtcatgggtgaccgtttccaggcgacgcagaacggcctg
tgtcacaccctggtgatcaagagctgtcagatcctggactcctctaagatcacagtggag
gctgaggggaacgtgtctaaggccaccctcaaagtacaggaagctcaggtgaccttcacc
aagaagatggaggcggtgatggccgaggagtacggagacgctaccatggaaacagaggtc
agtctggacatgggcgaggtccagtggatgaggcagggtgtggtcatccagccaggaccc
cgacacaccctggttcagagtggacgcaaacgcagcctaaccatctgcaacctcaacctc
tctgaccgcggaacctaccgctgtgaaaccctgcacgaccgcacgcaggtcaaactcaac
gtggagccccgtaagatcgccatccataagggtctggtggaaacggacacgtttgagcgg
gagacggcctccttcgaggtggagctgtctcacactggcgtggagggtgtctggcagaag
gacggcatccgggtcaaacccagcaaccactggcgggtgagctgcaatgggctggtccac
ggcctcaccctgtccaaccttaccctggaggacacgggcaccatcgtcttctctgcggag
ggagtccggacctctgccaggctcactgtcaaggagactccagtgactctcatgaagaag
ctggtagacatgagactggagcagggctctcctgccacattggagtgtgagctgtccagg
cagaacgtggaggtcaggtggctgaagaatgggacagagctgaagccagggaagaaccag
taccgtatttactccatggggaggaagaggttctgtcagctgctgcagtgtagcctcgct
gatgcaggcacctacacctgtgacgtaggagacgtcaatacatcctgtaacctggaggtc
tatgagcctgaagtggaggtgctacatgggctggaggacctgtatgtccaggaggaccag
aatgctgtgttcatgtgtgaggtgtccatggaggacgtgactggggagtggtacaaggat
ggacacaagatacgacccactagcaccatcaagatacgcacagaggggaccaaacacttc
cttctcatgtgcaacgttaaagctgaggattctggggagatccgctttgtgaccaaacag
acagaatcaacagcctacctagaggtggaagaggcccccgtgtctatcgtgaagcctctg
agagaccgcacggctctggagaagcaccgcgtgattctggactgcaccgtgtccacgccg
cgctgtgaactcacatggtacagaggcaaggcagagctggtgtcttctgataggctagag
atccacagtgacggctgctaccataaactgaccatccacgaggcgactgtagaggacgag
ggtacctatagtatagaggttggggagcacacgtccacagcccaactcctggtggaagcc
cagtccctggtgatagagacagagctggaggatgtggcggtgacggctcctgaccaggcc
tgtttccagtgtgaggtgtctgtggccatcagcaggcccccagtctggactctgaacgga
gagaccatccagtccagccctgatgtccgcttagagaaccacggaaccgtccacaaactg
aacctgaaacagaccagaccagacatgagcgggacggttaccttcgccatgggaaaggcc
aagagcagcgccaaactgaacgtgatgtggaagtag
DBGET
integrated database retrieval system
