Oncorhynchus tshawytscha (Chinook salmon): 112266383
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Entry
112266383 CDS
T05605
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04517
IgSF CAM signaling
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112266383 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112266383 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112266383 (sptbn1)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112266383 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
112266383 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
112266383
NCBI-ProteinID:
XP_042157456
LinkDB
All DBs
Position
LG02:58231970..58323344
Genome browser
AA seq
2351 aa
AA seq
DB search
MTTVAAEYEHMEITQQYSSSDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPLSEFT
EKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELALRTELIRQ
EKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEER
VQAVVSVAKELEAEKYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEM
LYIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAID
GDVYKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREK
EQILSSDESGKDLTGAVRLLSKHRTLEDEMNGRAGHLQHTIAEGQAMADGGHFGAAKIRD
RIADLRAQWAALEELAGVRKAHLEEACALHQFQADADDADAWTLDALRIVSSSEVGHDEF
STQALVRKHKDAAAEVASYRPVIDALHEQAAALPEEQAQSEEVKGRLAGIEERYKEVAEL
TRLRKQALQDALALYKMFSEADACEVWIDEKDQWLNSMEIPEKLEDLEVIQHRFESLEPE
MNNQASRVAVVNQIARQLMHNGHPSEKDIKAQQDKLNNRWSQFRDLADQKKESLISALGV
QNYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRG
EAERLAGEHPDQAKAITGRLAEITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSW
LSRTQTAIASEETPNTLAEAEKLLAQHDGIKNEICNYEEDYQKMRDMGEMVTQGQTDAQY
MFLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEVFLNNQEYMLAHTEM
PTTLEGAEGAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINADRIQERAASIDDRH
KKNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQ
AFMAELQSNKEWLDKIEKDGMQLVLEKPETESVVKEKLSALQKMWEELESTTQTKAQCLF
DANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVV
ELQSQALVLSQEGKDTGEVDGQRQMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDE
ILWVEERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSL
AVEAIRQRLADLQQLWGLMIEETEKRHVRLEEAHNAQKYYFDAAEAEAWMSEQELYMMSE
EKAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHPESERIGMRQSQVDK
LYAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQE
RFREFARDTGNIGQERVDAVNRLADELINAGHADAATVAEWKDGLNEAWADLLELIDTRT
QILAASYELHKFYHDAKEILSRILDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGT
QVRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWNTLLEACDGRRVHLLDTGDKFRFFS
MVRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLL
ARKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEP
YLFGRELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMR
KPPSPEPLPEQDTPLQSGVENGLQNGLPSDQDSPQNGVDRVEIMNGVAEQNSKDPSPIPS
PTASRRGKGSLSSTLPTQNQDLPAAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQE
MGFYKDNKAAGQGIPYHNAIPISLMGAVCDVAMDYKKKKHVFKLRVTDGNEYLFQAKEEE
EMSTWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPATVTLTSESSPGKREKDKEKDKE
KRFSLFGKKKL
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagtggccgcggaatatgagcacatggagatcacgcagcagtacagcagcagt
gacacggtcaacaaccgctgggatgatgagtgggacaacgagaacagctcagctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgcgaagcggtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgtgtgtcctgccgcatcaccgacctgtac
agggacctgagtgatggacgcatgctcatcaaactgctggaggtgctgtctggggagaga
ctgcccaagcccaccaggggacggatgcgtatccactgcctggagaacgtggacaaggct
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcacacgacatcgtt
gacggcaaccaccgcctcaccctggggctcatctggaccatcattctcaggttccagatt
caggacatcagtgttgagactgatggagacaacaaggagaagagatcagccaaggacgcc
ctgctcctctggtgccagatgaagactgctggctatccaaacgtgaacattcacaatttc
agcaccagttggcgagacggcatggctttcaatgccctcatccataagcacaggccagac
ctgattgactttgacaagctgaaaaagtccaatgcccaccacaacctacagaatgccttc
aatctggctgagcagcatcttgggcttaccaagctcctagacccagaggatatcagtgtg
gaccaccccgatgagaagtcggtcatcacatacgtggtgacgtactaccactacttctcc
aaaatgaaggcgctgaaagtggaggggaaacgtattgggaaggtactggacaatgccatt
gagacagagaagatgattgagaagtacgagtctctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggtcgagaaacccctaagtgagtttact
gagaagggcaacctggaggtgcttctgtttaccatccagagcaagatgagggccaacaat
cagaaagtctacatgcccagggagggcaaactcatctctgacattaacaagacctgggag
agactggagaaggcggagcatgagcgggagctggctctgaggacagagctgattcgacag
gagaaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctgg
ctgagtgagaaccagcgcctcgtctcacaggacaactttggctttgaccttccggcggtg
gacgcggccaccaagaagcatgaggccatcgagacggatattacggcgtacgaggagcgt
gtgcaggccgtggtgtctgtcgctaaggagctggaggcagagaagtaccacgacatcaaa
cgcatcacagcgcgcaaggacaacgtgatccggctgtgggagtacctgctggagcttctg
aaggcgaggcgccagcgcctggagatgaatctgggtctgcagagggtcttccaggagatg
ctttacatcatggactggatggacgagatgaagatgatgctgctgtcccaggactatggg
aagcatctgctcggagtggaggatctcctgcagaaacatgccctggtagaggccgatatc
ggcatccaggctgaccgtgtcaaagctgtcaacaacaatgcccagaaattcgcaatcgac
ggcgacgtttacaagccctgtgaccctcaggtaatacgcgaccgcgtggcccacatggag
ttctgctaccaggagctgacccagctggctgccgagcgccgggcccgcctggaggagtcc
cgccgtctctggaagttcttctgggagatggccgaggaggagggttggatccgtgagaag
gagcagatcctgtcatcggacgagagcggcaaggacctgaccggggctgtgcgcctgtta
agcaagcaccgcaccctggaggacgagatgaatggccgtgccggtcacctgcagcacacc
atcgccgagggccaggccatggccgacggtggccacttcggcgccgccaagatccgcgac
cgcatcgccgacctgcgggcgcagtgggcagcattggaggagctggcgggcgtgaggaag
gcccatctggaggaagcttgtgccctgcaccagttccaggcggacgcagacgatgccgac
gcctggaccctggatgccctgcgcatcgtgtccagcagcgaggtgggccatgacgagttc
tccacacaggccctggtgcgcaagcacaaggacgccgccgccgaggtggccagctatcgg
ccggtgatcgatgcgctccatgagcaggcggccgccttgcctgaggagcaggctcagtca
gaagaggtcaagggccgcctggcaggcatagaggagcgctacaaggaggtggccgagctg
acccggctgagaaagcaggcactgcaggacgccctggccctctacaagatgttcagcgag
gcggacgcctgcgaggtgtggattgatgagaaggatcagtggctcaacagcatggagatc
ccagagaagctagaagacctagaggtcattcagcacaggttcgagagcctggagcctgag
atgaacaaccaggcgtcacgcgtcgctgtcgtgaaccagatcgccaggcagctgatgcac
aacggacaccccagtgagaaggacataaaagcccagcaagataagctcaataacagatgg
agccagttccgggatctggcggaccagaagaaggagtctctaatctccgcgctgggtgtg
cagaactaccacctggactgcaacgaaaccaagtcgtggatccgcgagaagacaaaggtc
atcgagtccacccaggagctgggcaacgacctgactggtgtcatggcgctgcagcgcaaa
ctcactggcatggagcgtgacctggctgccatcgaggacaagctgggcgacctgcgcggc
gaggctgagcggctggccggcgagcacccagaccaggccaaggccatcacgggccgcctg
gccgagatcaccgctgtgtgggaggagatgaaggccacactgcgtaaccgcgaagagtcc
cttggcgaggccagcaagctgcagcagttcctgcgcgaactggatgacttccagtcgtgg
ctgtcgcgcacacagacagccattgcctcggaggagacgcccaacacgctggctgaggca
gagaagctgctagcacagcacgacggcatcaaaaacgagatctgcaactacgaggaggac
taccagaagatgcgcgacatgggcgagatggtgacccagggtcagaccgatgcccagtac
atgttcctgaggcagcggctacaggcactggacacaggctggaacgagctgcacaagatg
tgggagaaccggcagaacctgctgtcacagtcccacgcctaccagctgtttctcagggac
accaagcaagccgaggtcttcctcaacaaccaggagtacatgctggcccatacagagatg
cccactacgcttgagggggccgaaggagccatcaagaagcaggaggacttcatgaccacc
atggacgccaacgaagagaagataaacggcgtggtggaggctggcaggcggctggcgagc
gacggcaacatcaacgccgaccgcatccaggagagagcggcgtctattgatgacaggcat
aagaagaaccgcgaggctgctgtggagctactgatgaggctgaaggataaccgggacctt
cagaagttcctacaggattgccaggagctgtctctgtggatcaatgagaagatgctcacg
gcccaggacatgtcgtacgacgaggccaggaacctccacagcaaatggctcaagcatcag
gccttcatggccgagttgcagtccaacaaggagtggctggacaagattgagaaggatggg
atgcagctggtgttggagaagcctgagacagagtcggtggtcaaggagaagctctcagcc
ctccagaagatgtgggaagagttggagtccaccacccagaccaaggcccagtgcctgttt
gacgccaacaaggctgagctgtttacacagagctgtgccgacctggacaagtggctgggt
ggcctggagggccagattcaatcggacgactacggcaaagacctgaccagcgtcaacatc
ctgctcaagaagcagcagatattggaaaaccaggtggaggtccgtcagagggaggtggtg
gagctgcagagccaggcgctggtcctcagccaggaagggaaggacacgggggaggtggac
ggccagagacaaatggtggagcacaagttcaaagagctgctggacccgctgaggaagaga
aagaacttcctggtggcctcccgcgagatccaccagttcaaccgcgatgtggaggacgag
attctgtgggtcgaagagaggatgccaattgcaacctccacagatcatggtcacaacctg
cagaccgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacac
cagccccgcttcgatgacattttcgagcggagcgagagcctgctgatggaggacagcctt
gccgtggaggccatccgccagcgcctggccgacttgcaacagctgtggggcctgatgatt
gaggagacggagaagcgtcacgtccgactggaggaggcccacaatgcacagaagtactac
tttgatgctgctgaggctgaggcctggatgagcgagcaggagttgtacatgatgtctgag
gagaaggccaaggatgagcagagttccgtagccatgctgaagaagcaccagattgtggag
cagtcggtggaggactacgctgagacagtacatcagctctccaagaccagcagaggcctg
acagctgcaggacatccagagagtgagaggataggcatgcgtcagtctcaggtggacaag
ctctatgccggcatgaaggacctgtctgaggagaggcggggcaaactggatgagcggttc
cgcctgttccagctcaatcgcgaggttgacgacttggagcagtggattgccgagcgggag
gtggtggccggatctcatgagctgggacaggactatgagcatgtcaccatgctccaggag
cgcttccgggagtttgcgcgcgacacaggcaatatcggccaggagcgtgtggatgccgtc
aaccgcctggcagatgagctgataaatgcgggccacgcagatgccgccacggtggccgag
tggaaagatggactcaacgaggcctgggctgacctgctggaacttatcgacacgcgcacg
cagatcctggccgcctcctacgagctgcacaagttctaccatgacgccaaggagatcctg
agccgcatcctggacaaacacaagaaacttccagaggaggtgggacgtgaccagaacaca
gtggagacactgcagaggatgcacaccaccttcgagcatgacatccaggccctgggaaca
caggtgaggcagctgcaggaggatgccgtccgcctccagtcggcctatgccggtgacaag
gcagacgacatccagcggagggagagcgaggtgctggaggcctggaataccctgctggag
gcctgtgatggccgcagggtccacctcctggacacgggcgacaaattccgcttcttcagc
atggtgcgcgacctcatgctgtggatggaggacgtcatccgtctcatcgaagcccaggag
aatccaagggacgtgtcctcagtggagttgttgatgaacaaccaccagggtatcaaggct
gagatcgacgcccgcaatgacagcttcaccgcctgcattgagttgggcaagtctctgcta
gccagaaagcactatgcatcagaggagatcaaagataagttactacagctgatggacaag
aggaaagacatgattgacaagtgggaggaccgacgggagtggttaagactgattttggaa
gttcaccagtttgggagggatgcaggggtggcagaggcgtggctgctgggacaggaacca
tacctattcggccgggagttggggcagagcgtggacgaggtggagaaactgatcaagagg
cacgaggcattcgagaagtcggccgccacttgggaggagcgcttctcagcactggagagg
ttgactacgttggagttattggaagtgagaagacagcaagaggaagaagaaagaatgcga
aaacccccttcgccagagcctttaccggagcaagacacaccactgcagagtggagtagag
aacggactgcagaatggactgccctcagaccaggattccccacagaatggtgtggacaga
gttgagatcatgaatggagtggcggagcagaactcaaaggaccccagccccattccctca
cccacagccagccggcggggcaagggcagcctgtcctccacattgccgacccagaaccag
gatttgcctgcagctcagctggagggcttcctgcatcgcaagcatgagtgggagggtcac
aacaagaaggcctcaagcagatcctggcataacgtgtactgcgttatcaacaatcaggaa
atgggcttctacaaagacaacaaggctgctggtcaaggcatcccctaccacaatgcgatt
ccgatcagtctaatgggggctgtgtgtgatgtggccatggattacaaaaaaaagaaacat
gtcttcaaactcagagttacggatggaaatgagtatctcttccaagccaaagaagaagag
gagatgagcacatggatccaggccattctgaatgcggggacacctgacaaggtatcgatt
acgcccagcaaccagagcactccggcgtcaagccgagcccagaccctgcccgccaccgtc
accctcaccagcgaatccagcccgggcaagcgggagaaagacaaggagaaggacaaggag
aagcgattcagcctgttcggcaagaaaaaactataa
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integrated database retrieval system
