Oncorhynchus tshawytscha (Chinook salmon): 112266414
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Entry
112266414 CDS
T05605
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112266414
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112266414
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112266414
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112266414
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
SR proteins
112266414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
GRP
Motif
Other DBs
NCBI-GeneID:
112266414
NCBI-ProteinID:
XP_024299619
UniProt:
A0AAZ3SSQ6
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All DBs
Position
LG14:5410465..5418119
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AA seq
304 aa
AA seq
DB search
MSDNEKDFGERDSRSASRSVSPRGSGKSASRSPAHSPARSKDGSRHSRSKSHSRSRSKSR
SRSHRSSRRHYSRSRSRSHRRRSRSRSRSGEYRRRRSHSHSPMSNRRRHIGNRANPDPNC
CLGVFGLSLYTTERDLRDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFEVREDANEAKER
ANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGGSSSSGGGGGGGGSGGPSSSS
SRRSSKDYDRGGDRGYDRGYDRGYDRYDDRECYRSYRRRSPSPYYSRGTYRSRSRSRSYS
PRHY
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgaaaaggattttggcgagcgggactcgcggtccgcttccaggagtgtg
agcccaaggggttctgggaagtctgccagccgctccccggcccattccccagcccgctcc
aaagatggctccagacactccaggtctaagtcccactcccgatcccgctccaagtccagg
tctcgttcccacagaagctcccgcaggcattattcccgctctcgctcccgttcccaccgc
cgccgttcccgtagccgttcccgaagcggggaataccgccgccgtcggagccacagccac
tcccccatgtccaaccgccgcaggcacattggcaaccgggccaacccggacccgaactgc
tgcctgggtgtgtttggtctgagcctgtacaccacagagagagacctgagagacgtgttc
tccaagtacggtcccctggctgacgtcagcatcgtctacgaccagcagtcacgacgctcc
cgcggcttcgccttcgtctacttcgaagtccgagaggacgccaatgaggctaaggagaga
gctaatggaatggagttggatggacggaggatcagggtcgatttctccatcaccaaacga
ccacacactcctacccctgggatatatatgggacggcccacatatggtggcggcggcggc
agcagcagcagcggaggcggtggaggaggaggaggaagtggcggccccagctcaagctcg
tctcgccgtagctcgaaggattacgaccgtggcggtgaccgtggttacgacagaggctat
gaccgtggctacgatcgttacgacgaccgagagtgctacaggtcctacagacgcaggtct
ccgtccccgtactacagccgagggacctaccggtctcgctcccgctcgcggtcttactcc
ccacgccactactga
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