KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112266433
Entry
112266433         CDS       T05605                                 
Name
(RefSeq) ATP-binding cassette sub-family C member 4
  KO
K05673  ATP-binding cassette, subfamily C (CFTR/MRP), member 4
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010  ABC transporters
otw04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    112266433
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    112266433
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:otw02000]
    112266433
Transporters [BR:otw02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    112266433
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 AAA_29 AAA_22 MMR_HSR1 RsgA_GTPase nSTAND1 Dynamin_N DUF87 AAA_7 ABC_ATPase
Other DBs
NCBI-GeneID: 112266433
NCBI-ProteinID: XP_024299664
LinkDB
Position
LG14:complement(6020204..6048970)
AA seq 1323 aa
MEPVKKDAKTNPSATANLFSQVFFCWLNPLFRIGYKRRLEEDDMYKVLPEDGSERLGEEL
QSLWDHEVQKAAKDLRTPKLTKVLIKCYWKPYAVLGIFTLIEEVIKVIQPVFLGKLIQYF
EKYDPDNMDALYEAFGYAAGVSLSTLILAITHHLYFFHVQRTGMKMRVAMCHMIYKKALC
LSSAAMGKTTTGQIVNLLSNDVNKFDEVTIFLHFLWVGPLQAAAVLGLLWVEIGPSCLAG
MAVLVILMPTQTMFGRLFSKFRSKTAALTDNRIRTMNEVVSGIRIIKMYAWEKPFSALVN
EVRRKEISKIMSSSYLRGLNMASFFAASKIIVFITFTVYVLLGNTISASRVFVTVSLYSA
VRLTVTLFFPSAVEKLSETRISVRRIKTFLLLDEIVKSNHGFLQEEKQEPSVEIQDLICY
WDKSQDAPSLQNLSLTVKSEQLVAVIGPVGAGKSSLLSSILGELPHDKGVLKVKGQLTYA
SQQPWVFPGTIRSNILFGKELHPQKYEKVLRACALKRDMELLPEGDLTLIGDRGATLSGG
QKARVNLARAVYQDADIYLLDDPLSAVDAEVGRHLFEQCICGILKNKPRILVTHQLQYLQ
AANQILVLKEGHMVARGTYSELQRSGVDFTSLLKREEEGPQAPGAETESRSPRSRTLSQN
SVVSHTSSIRSVKDGTEQLPAEPVQTVVEESRSEGTIGVGLYVKYLKAGANILVLIGVVL
LQFLAQAAYILQDWWLAYWAGEQEKLNVNGTVTVQNGVNVTEELSLDFYLGIYAGLTGAT
LIFGFARSLLMFNVLVKAAQSLHNRMFNSILRTPVRFFDINPIGRVLNRFSKDIGQLDAA
LPWTFVDFIQIFLQIIGVIAVAASVIPWILIPLVPLVIVFLFLRRYFLQTSRDVKRLEST
TRSPVFSHLSSSLQGLWTIRAFRAEERFQNTFDTYQDLHSESWFLFLVTSRWFAVRLDGM
CAVFVTITAFGCLLLRDQVEAGSVGLALSYAVTLMGMFQWGVRQSAEVENMMTSVERVVE
YTELESEAPWETQKRPPPEWPSQGLITFDRVSFSYSSDGPVVLKDMKAMFRPKEKVGIVG
RTGAGKSSLVSALFRLAEPEGRIYIDGVLTSEIGLHDLRQKMSIIPQDPVLFTGTMRKNL
DPFSQHTDEDLWNALQEVQLKSVVEELPNKMETVLAESGSNFSVGQRQLVCLARAVLRKN
RILIIDEATANVDPRTDELIQKTIREKFRECTVLTIAHRLNTIIDSDRILVLDAGQIHAY
DEPHTLLQNHDGIFFKMVQQAGRQEAVALLQSAKQAYNSRSRPSTTNGGVGADGNLVIFE
TAL
NT seq 3972 nt   +upstreamnt  +downstreamnt
atggaaccggtaaaaaaagatgcgaagacgaatccatcggcaacagctaatcttttctcc
caggtattcttctgctggctaaatcctttgttccgcattggatacaaacggaggctagag
gaagatgacatgtacaaagtgcttccggaggatgggtctgagagactgggagaggaacta
cagagtctttgggaccatgaggtgcagaaggctgctaaagatctcaggactcccaaactc
accaaagtcctgatcaagtgctactggaaaccctacgcagtgttggggatctttactctt
attgaggaggtgattaaggtgatccagccagtgttcttgggaaagctgatccaatacttt
gagaagtacgatcctgataatatggatgcactgtatgaggcctttggctacgctgctggt
gtctctctgtccaccctgatcttggccatcacgcatcacctttacttcttccacgtccag
aggaccggcatgaaaatgcgagtagccatgtgtcacatgatctacaagaaggccctgtgt
ctcagcagtgcagcgatgggaaaaacaaccacaggccaaatagtgaacctgctatccaac
gatgtcaacaagtttgatgaggtgactattttcctgcacttcctgtgggtagggcctctc
caggcggcggccgtcctggggctgctgtgggtggagattggcccatcatgcctcgcaggc
atggccgtcctcgtcatccttatgccaacgcagaccatgtttggaaggctcttctccaag
ttcaggagtaaaacagcagccttgacagacaataggatacgcacaatgaatgaagtggtg
tctggaatcaggatcatcaaaatgtatgcctgggagaagcccttctcagcactggtcaat
gaagtcagaaggaaagagatctccaagatcatgtcgagctcctacctgcgaggcctcaac
atggcctccttctttgcggccagtaagatcatagtcttcatcaccttcaccgtctacgtc
ctcctggggaacaccatctcagccagccgggtgtttgtgaccgtgtctttgtacagtgcc
gtccgcctcaccgtcaccctcttcttcccctcggccgtagagaaactgtctgagacgcgc
atcagcgtccgcaggatcaagacttttctcctgttggatgagattgtgaaaagcaaccat
ggatttctccaggaggagaagcaagagccctctgtggaaatccaggacctgatttgctac
tgggacaagagtcaggacgccccgtctctccagaacctatcactcacagtaaagtcagag
cagctcgtcgctgtcattggtcctgtgggggctggaaagtcctctctgctcagctccatc
ctgggggagctgcctcacgacaagggggtgttgaaggtcaaaggtcagctgacctacgcc
tcccagcagccctgggtgttccctggaaccatccgcagcaacatcttgtttggcaaagag
ctccatcctcagaagtatgagaaggtcctgagagcctgcgccctcaagagggacatggag
ctgctgccagaaggggacctgacattgataggggacagaggagcaaccctcagtggggga
cagaaagctagagtgaacctggcccgggctgtgtaccaggatgctgatatctacctgctg
gacgaccctctaagtgctgtggatgctgaggtcgggagacacctgtttgaacagtgtatt
tgtggtattctgaagaataagccccgcatcctggtcacccaccagttgcagtacctccaa
gcagccaaccagatcctcgtcctcaaggagggtcacatggtggcaagggggacgtacagc
gaactccagcgctctggggtcgacttcacctccctcctgaagagggaagaggaggggcca
caagccccaggggcggagactgaaagccgctcgccacgcagccgcaccctctcgcagaat
tccgtggtctcccacacctcctccatacgttctgttaaagatggaactgaacagcttccg
gcagagcctgtccagacagtagtcgaggagagccgctcggaggggaccatcggcgttggc
ctctatgtcaagtacctgaaggcaggcgccaacatcctggtgttgataggagttgtatta
ctccagttcctagctcaggcagcatacattctacaggactggtggctggcatattgggca
ggagagcaggagaagctcaacgttaacggcactgtgaccgtccaaaatggtgtcaacgtc
actgaagagctgagcctggatttctacctcggcatttatgcaggtttgactggagcaact
ctcatctttggctttgccaggagtctgttgatgttcaatgtgctggtgaaagctgctcag
tctctgcacaaccgcatgttcaactctatcctccggacacctgtacgcttctttgacatt
aacccaattggaagagtcctcaaccgcttctctaaggacattggccaactggacgcggcc
ttaccttggacctttgtggacttcattcagatattcctgcagatcatcggtgtgatcgct
gtagcggcctccgtcatcccctggatcctcatcccattggttcctcttgtcatcgtcttt
ctgttcctgagacgctacttcctgcagacgtcacgagatgtgaagcgcctggaatccacc
actcggagtccagtcttttcccacctgtcctcgtccctccaaggtctgtggacgatccgg
gccttcagagccgaggagagattccagaacacctttgacacttatcaggatctgcactca
gaatcctggttcctgttcctggtcacctctcgctggtttgccgtccgcctggatggcatg
tgcgccgtcttcgtcaccatcaccgccttcggctgccttctgctccgagaccaggtggag
gctggatctgtaggcctggcgttgtcctacgctgtgactctcatggggatgttccagtgg
ggggtacggcagagtgctgaggtggagaacatgatgacgtcagtggagagggtggtagag
tacacagagctggagagtgaagcaccctgggaaacccagaagcgtccacctcctgagtgg
ccaagccaaggcctcatcacctttgaccgggtcagcttctcctacagctcagatggacct
gtggtcctgaaggacatgaaggccatgttcaggcccaaagagaaggttggcatcgtgggc
aggacaggtgcggggaaaagctccctggtatcggcgctcttccgcctggcagagccagag
ggcaggatctacatcgatggagttctgacctccgagatcggccttcatgacctgcgccag
aagatgtcaatcatacctcaggacccagtgcttttcacaggcaccatgaggaagaacctg
gaccctttcagccagcacacagacgaggacctgtggaatgctctccaagaggtccagctg
aagtctgttgtggaggagctgcccaataagatggagacggttctggctgagtcgggctcc
aacttcagtgtgggtcagaggcagctggtctgtctggcccgagccgtcctgaggaagaac
cgcatcctcatcatcgacgaggccacggccaacgtggaccccagaacagacgagctgatc
cagaagacaataagagagaaattcagggaatgcaccgtgctcactatcgcccaccgcctc
aacaccatcatcgacagcgaccgcattctggttctagacgcgggtcagatccacgcatac
gacgagccccacaccctacttcagaaccacgatggtattttcttcaagatggtccagcag
gcaggcaggcaggaggccgttgccctcctgcagtcagctaaacaggcatacaacagccgg
agtcgtcccagtacgaccaatggcggggtcggcgcagacggcaacttggtcatctttgag
acggccctgtaa

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