KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112266467
Entry
112266467         CDS       T05605                                 
Symbol
sde2
Name
(RefSeq) replication stress response regulator SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112266467 (sde2)
   03032 DNA replication proteins [BR:otw03032]
    112266467 (sde2)
   03400 DNA repair and recombination proteins [BR:otw03400]
    112266467 (sde2)
Spliceosome [BR:otw03041]
 Complex C
  Other components
   Complex C specific factors
    112266467 (sde2)
DNA replication proteins [BR:otw03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    112266467 (sde2)
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    112266467 (sde2)
SSDB
Motif
Pfam: SDE2_2C Sde2_N_Ubi Exonuc_VII_L NtrZ
Other DBs
NCBI-GeneID: 112266467
NCBI-ProteinID: XP_024299725
LinkDB
Position
LG02:complement(57982705..57990994)
AA seq 390 aa
MELFLSGPLLHFCSAYFPTGASVRDLVDIFTKEKGIPSSDLYVKNNGRLSELDEKLQAGA
VYRLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKEMAEWLKKQA
DREAEKEQRRLERLQRKLAEPKHHFTDPEYEKQCHDLSERLEDSVLKGMQASSSGLVKVD
EAPKRKKPPPNKGQGKSKKKCFWTGVGGLDDLDSSEDDDDASDSGNSPSTSASGSGVPDC
PVTGATSAHTSASQSRAEQTATPEAPRASSNSISGPSSPESPAEVQTQSQAEAAAFATSG
SGEQEVVPTEETFPKTDNCEDGPLDLQAVHSDKELETLGLDRLKAELIARGMKCGGTLSE
RAARLFSTVGLSAEDIDPALLAKPSKGKKQ
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggagttgtttctttctggtccacttcttcatttttgcagcgcttattttcctactgga
gcatctgttcgtgatctagttgatatttttacgaaagaaaagggaatcccatcatcggat
ctctatgtcaagaataatggacgactatcagagcttgatgagaaattgcaggctggagcg
gtgtatcgactggagcctcgtctctgtggagggaaaggaggctttgggtctatgcttagg
gctcttggggcacaaattgagaagaccacaaaccgcgaagcctgcagagacctaagcgga
aggagactaagagatgtcaaccatgagaaagagatggcagagtggcttaagaagcaggca
gaccgcgaggcagagaaagagcaaaggcgtctggagagactgcagaggaagctggctgag
cccaagcatcactttacagacccggagtacgagaagcagtgccacgatctctcagaacgc
ctggaggactccgttttaaaaggaatgcaagcctcttccagcggactagtgaaagtagac
gaggcaccgaaacgcaaaaagccacctccaaacaaaggccaagggaaaagcaagaagaaa
tgcttttggacgggtgttggtggcctggatgacctcgacagctctgaggatgacgatgat
gcaagcgacagcgggaactctccctccacatctgcttccggttcaggggtgcctgattgt
cccgtaacgggagcaacgtcagctcacacatcagcctctcagagcagagcggaacaaacg
gcaactccggaagctcctagggcaagcagcaactccatctcaggacccagctctccagag
agcccagccgaggtgcagacacaatctcaagcagaggcagcagcttttgctaccagtggt
agtggggagcaggaggtggtccccacagaagaaacattcccaaagaccgacaattgtgaa
gatgggcccttagacctccaggcagtgcactcagacaaggagttggagactttggggttg
gataggctaaaggcagaactgattgcacgggggatgaagtgtgggggaacactgtccgag
cgcgctgctcgccttttctccaccgtagggctttctgcagaggacatcgatcctgcccta
ttggccaaacccagcaagggcaagaagcaatga

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