Oncorhynchus tshawytscha (Chinook salmon): 112266477
Help
Entry
112266477 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
otw04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112266477
04082 Neuroactive ligand signaling
112266477
04519 Cadherin signaling
112266477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112266477
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112266477
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
112266477
NCBI-ProteinID:
XP_024299734
LinkDB
All DBs
Position
LG14:complement(8565418..8615120)
Genome browser
AA seq
539 aa
AA seq
DB search
MEPDETHRGMNMYLWWILLQGFWSVYGELPFIADNNAAMLVNWNAVDGNKKLFAIYDTSV
NEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYF
QQYWRDKRLAYLGIPLNLTLDNRVADSLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGT
VLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDNAVTGVTRIEL
PQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN
YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVN
YIFFGRGPQMQKKLAEKAERANNERAAKYDTNRSPQEGGKTSSLKLTKQPNRAKTLRVSQ
SAESHGNILLTTLEIHNEVAGNEVTTSLADSRNSSVMGFDNTSTGTGVQCRKASRASGPR
HSLDRHAQLKRHKLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSLFNLIYWMYYVN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgatgagactcatagaggaatgaacatgtacctttggtggattttactgcaa
ggattttggagcgtttatggggaacttccattcattgcagacaataacgcagccatgttg
gtcaactggaatgcagtcgatggaaacaagaagttgtttgcaatctatgataccagcgtg
aatgaaccagggaacatgtcgtttgtgaaagagacggtggacaaactactaaagggatat
gatattcgtcttcgaccagactttggaggggcccctgttgcagttggcatgagtatagat
gtggcgagcatagacatggtatccgaagtcaacatggactacactttaaccatgtacttc
cagcagtactggagggacaagaggctggcgtacttagggatcccactgaaccttaccctg
gataaccgggtggcagattcactctgggtccctgacacctacttcctgaatgacaagaag
tccttcgtccacggtgtgacggtcaagaaccgcatgatccgcctccacccagatggaaca
gtgctctacggcctgaggatcacaacgacggcagcctgtatgatggacctgaggaggtac
cctctcgacgagcagaactgcactctggagatcgagagctatggatacacgacagatgac
attgagttctactggaagggaggagacaatgcagtgacgggggtgacacgcattgagctg
ccacagttctccatagtggactacaagctggtgtccagaaacgttgtcttttccacaggt
gcctacccacgactgtctttgagcttcaagctaaagaggaacattggctactttatcctg
cagacctacatgccctccatcctgatcaccatcttgtcctgggtctccttctggatcaat
tacgatgcctcggctgcaagagtggcattagggatcaccactgtgctcaccatgaccacc
atcaacacccatctgagagagacgctccctaagatcccctacgtcaaggccattgacatg
tacctgatgggctgcttcgtcatggtcttcctggccctgctggagtacgccttcgtcaac
tacatcttcttcggccgtgggccacagatgcagaagaagctggcagagaaagccgagagg
gccaacaacgagagggcggccaaatatgacaccaatcggtctcctcaggaaggaggtaaa
acgtcatctcttaagctgactaagcagcctaatagagcaaaaacgctccgtgtctcacag
tcggcggagtcccacggtaatatcctgctgaccaccctggagatacacaacgaggtggca
ggaaatgaggtcaccaccagcctggcggacagcaggaactcctccgtcatgggatttgac
aacaccagcacaggtaccggcgtccagtgcaggaaggcgagccgggcctcgggtcctcgc
cacagcctcgacaggcacgcccagctcaagaggcacaaactgcggcggcgttcgtcgcag
ctcaaaatcaaaatccctgacctgacggacgtaaacgccatcgacaggtggtcgcggatt
atcttcccctccgttttctccctctttaatctaatctactggatgtattatgtcaactga
DBGET
integrated database retrieval system
